Dbfetch
ID ON983762; SV 1; linear; genomic DNA; STD; HUM; 3971 BP.
XX
AC ON983762;
XX
DT 20-DEC-2022 (Rel. 144, Created)
DT 21-DEC-2022 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*39NEW allele, complete
DE cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-3971
RA Visentainer J.E.L., Massi F.P., Lima Neto Q.A., Zacarias J.M.V.,
RA Pinto L.D.B., Hirata B.K.B., Melo F.C., Braga M.A., Ribeiro H.C.S.,
RA Silva S.G.;
RT ;
RL Submitted (06-JUL-2022) to the INSDC.
RL Ciencias Basicas da Saude, Universidade Estadual de Maringa, Avenida
RL Colombo, 5790, Maringa, Parana 87020-900, Brasil
XX
DR MD5; 2b7a509591c23dc175e8161ccc218b1a.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: TypeStream Visual v. 2.1.0
CC Assembly Name :: HLA-B*39:NEW
CC Coverage :: Full Gene
CC Sequencing Technology :: Illumina
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..3971
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene 1..3971
FT /gene="HLA-B"
FT /allele="HLA-B*39NEW"
FT mRNA join(1..357,486..755,1002..1277,1850..2125,2219..2335,
FT 2777..2809,2916..3971)
FT /gene="HLA-B"
FT /allele="HLA-B*39NEW"
FT /product="MHC class I antigen"
FT exon 1..357
FT /gene="HLA-B"
FT /allele="HLA-B*39NEW"
FT /number=1
FT 5'UTR 1..284
FT /gene="HLA-B"
FT /allele="HLA-B*39NEW"
FT CDS join(285..357,486..755,1002..1277,1850..2125,2219..2335,
FT 2777..2809,2916..2959)
FT /codon_start=1
FT /gene="HLA-B"
FT /allele="HLA-B*39NEW"
FT /product="MHC class I antigen"
FT /protein_id="WAP48844.1"
FT /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPR
FT FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQICKTNTQTDRESLRN
FT LRGYYNQSEAGSHTLQSMYGCDVGPDGRLLRGHNQFAYDGKDYIALNEDLSSWTAADTA
FT AQITQRKWEAARVAEQLRTYLEGTCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK
FT GGSYSQAASSDSAQGSDVSLTA"
FT intron 358..485
FT /gene="HLA-B"
FT /allele="HLA-B*39NEW"
FT /number=1
FT exon 486..755
FT /gene="HLA-B"
FT /allele="HLA-B*39NEW"
FT /number=2
FT intron 756..1001
FT /gene="HLA-B"
FT /allele="HLA-B*39NEW"
FT /number=2
FT exon 1002..1277
FT /gene="HLA-B"
FT /allele="HLA-B*39NEW"
FT /number=3
FT intron 1278..1849
FT /gene="HLA-B"
FT /allele="HLA-B*39NEW"
FT /number=3
FT exon 1850..2125
FT /gene="HLA-B"
FT /allele="HLA-B*39NEW"
FT /number=4
FT intron 2126..2218
FT /gene="HLA-B"
FT /allele="HLA-B*39NEW"
FT /number=4
FT exon 2219..2335
FT /gene="HLA-B"
FT /allele="HLA-B*39NEW"
FT /number=5
FT intron 2336..2776
FT /gene="HLA-B"
FT /allele="HLA-B*39NEW"
FT /number=5
FT exon 2777..2809
FT /gene="HLA-B"
FT /allele="HLA-B*39NEW"
FT /number=6
FT intron 2810..2915
FT /gene="HLA-B"
FT /allele="HLA-B*39NEW"
FT /number=6
FT exon 2916..3971
FT /gene="HLA-B"
FT /allele="HLA-B*39NEW"
FT /number=7
FT 3'UTR 2960..3971
FT /gene="HLA-B"
FT /allele="HLA-B*39NEW"
XX
SQ Sequence 3971 BP; 757 A; 1128 C; 1193 G; 893 T; 0 other;
gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60
cgtctgcaat ggggaggcgc agcgttgggg attccccact cccctgagtt tcacttcttc 120
tcccaacttg tgtcgggtcc ttcttccagg atactcgtga cgcatcccca cttcccactc 180
ccattgggtg tcggatatct agagaagcca atcagcgtcg ccggggtccc agttctaaag 240
tccccacgca cccacccgga ctcagagtct cctcagacgc cgagatgctg gtcatggcgc 300
cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg 360
agtgcgggtc gggagggaaa tggcctctgc cgggaggagc gaggggaccg caggcggggg 420
cgcaggacct gaggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc 480
cccaggctcc cactccatga ggtatttcta cacctccgtg tcccggcccg gccgcgggga 540
gccccgcttc atctcagtgg gctacgtgga cgacacgcag ttcgtgaggt tcgacagcga 600
cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggaata 660
ttgggaccgg aacacacaga tctgcaagac caacacacag actgaccgag agagcctgcg 720
gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780
ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840
tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900
gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960
ggggctcggg gggacggggc tgaccgcggg gccggggcca gggtctcaca ccctccagag 1020
catgtacggc tgcgacgtgg ggccggacgg gcgcctcctc cgcgggcata accagttcgc 1080
ctacgacggc aaggattaca tcgccctgaa cgaggacctg agctcctgga ccgcggcgga 1140
caccgcggct cagatcactc agcgcaagtg ggaggcggcc cgtgtggcgg agcagctgag 1200
aacctacctg gagggcacgt gcgtggagtg gctccgcaga tacctggaga acgggaagga 1260
gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320
ccggggatgg cctccaacga gaagaagagg aaaatgggat cagcgctaga atgtcgccct 1380
cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct 1440
ctaggacaat taagggatga cgtctctgag gaaatggagg ggaagacagt ccctagaata 1500
ctgatcaggg gtcccctttg acccctgcag cagccttggg aaccatgact tttcctctca 1560
ggccttgttc tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt 1620
cactttacct ccactcagat caggagcaga agtctctgtt ccccgctcag agactcgaac 1680
tttccaatga atagattatc ccaggtgcct gcgtccaggc tggtgtctgg gttctgtgcc 1740
ccttccccac cccaggtgtc ctgtccattc tcaggctggt cacatgggtg gtcctagggt 1800
gtcccatgag agatgcaaag cgcctgaatt ttctgactct tcccatcaga ccccccaaag 1860
acacatgtga cccaccaccc catctctgac catgaggcca ccctgaggtg ctgggccctg 1920
ggcttctacc ctgcggagat cacactgacc tggcagcggg atggcgagga ccaaactcag 1980
gacaccgagc ttgtggagac cagaccagca ggagacagaa ccttccagaa gtgggcagct 2040
gtggtggtgc cttctggaga agagcagaga tacacatgcc atgtacagca tgaggggctg 2100
ccgaagcccc tcaccctgag atggggtaag gagggggatg aggggtcata tctcttctca 2160
gggaaagcag gagcccttca gcagggtcag ggcccctcat cttcccctcc tttcccagag 2220
ccatcttccc agtccaccgt ccccatcgtg ggcattgttg ctggcctggc tgtcctagca 2280
gttgtggtca tcggagctgt ggtcgctgct gtgatgtgta ggaggaagag ttcaggtagg 2340
gaaggggtga ggggtggggt ctgggttttc ttgtcccact gggggtttca agccccaggt 2400
agaagtgttc cctgcatcat tactgggaag cagcatgcac acaggggcta acgcagcctg 2460
ggaccctgtg tgccagcact tactcttttg tgcagcacat gtgacaatga aggacggatg 2520
tatcaccttg atggttgtgg tgttggggtc ctgattccag cattcatgag tcaggggaag 2580
gtccctgcta aggacagacc ttaggagggc agttggtcca ggacccacac ttgctttcct 2640
cgtgtttcct gatcctgccc tgggtctgta gtcatacttc tggaaattcc ttttgggtcc 2700
aagactagga ggttcctcta agatctcatg gccctgcttc ctcccagtcc cctcacagga 2760
cattttcttc ccacaggtgg aaaaggaggg agctactctc aggctgcgtg taagtggtgg 2820
gggtgggagt gtggaggagc tcacccaccc cataattcct cctgtcccac gtctcctgtg 2880
ggctctgacc aggtcctgtt tttgttctac tccagccagc gacagtgccc agggctctga 2940
tgtgtctctc acagcttgaa aaggtgagat tcttggggtc tagagtgggc gggggggcgg 3000
ggagggggca gaggggaaag gcctgggtaa tggagattct ttgattggga tgtttcgcgt 3060
gtgtgatggg ctgttcagag tgtcatcact taccatgact aaccagaatt tgttcatgac 3120
tgttgttttc tgtagcctga gacagctgtc ttgtgaggga ctgagatgca ggatttcttc 3180
acgcctcccc tttgtgactt caagagcctc tggcatctct ttctgcaaag gcacctgaat 3240
gtgtctgcgt ccctgttagc ataatgtgag gaggtggaga gacagcccac ccttgtgtcc 3300
actgtgaccc ctgttcccat gctgacctgt gtttcctccc cagtcatctt tcttgttcca 3360
gagaggtggg gctggatgtc tccatctctg tctcaacttt atgtgcactg agctgcaact 3420
tcttacttcc ctactgaaaa taagaatctg aatataaatt tgttttctca aatatttgct 3480
atgagaggtt gatggattaa ttaaataagt caattcctgg aatttgagag agcaaataaa 3540
gacctgagaa ccttccagaa tctgcatgtt cgctgtgctg agtctgttgc aggtggggtg 3600
tggagaaggc tgtggggggc caagtgtgga cggggcctgt gcccatttgg tgttgagtcc 3660
atcatgggct ttatgtggtt agtcctcagt tgggtcacct tcactgctcc attgtccttg 3720
tcccttcagt ggaaacttgt ccagtgggag ctgtgaccac agaggctcac acatcgccca 3780
gggcggcccc tgcacacggg ggtctctgtg cattctgaga caaattttca gagccattca 3840
cctcctgccc tgcttctaga gctccttttc tgctctgctc ttctgccctc tctccctgcc 3900
ctggttctag tgatcttggt gctgaatcca atcccaactc atgaatctgt aaagcagaga 3960
ctaatttaga c 3971
//