Dbfetch
ID ON925002; SV 1; linear; genomic DNA; STD; HUM; 3982 BP. XX AC ON925002; XX DT 20-DEC-2022 (Rel. 144, Created) DT 21-DEC-2022 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*18NEW allele, complete DE cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3982 RA Visentainer J.E.L., Massi F.P., Lima Neto Q.A., Zacarias J.M.V., RA Pinto L.D.B., Hirata B.K.B., Melo F.C., Braga M.A., Ribeiro H.C.S., RA Silva S.G.; RT ; RL Submitted (01-JUL-2022) to the INSDC. RL Ciencias Basicas da Saude, Universidade Estadual de Maringa, Avenida RL Colombo, 5790, Maringa, Parana 87020-900, Brasil XX DR MD5; b11b76f10b1d3eb19d429534adc7a870. XX CC ##Assembly-Data-START## CC Assembly Method :: TypeStream Visual v. 2.1.0 CC Assembly Name :: HLA-B*18:NEW CC Coverage :: Full Gene CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3982 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene 1..3982 FT /gene="HLA-B" FT /allele="HLA-B*18NEW" FT mRNA join(1..357,486..755,1002..1277,1850..2125,2230..2346, FT 2788..2820,2927..3982) FT /gene="HLA-B" FT /allele="HLA-B*18NEW" FT /product="MHC class I antigen" FT exon 1..357 FT /gene="HLA-B" FT /allele="HLA-B*18NEW" FT /number=1 FT 5'UTR 1..284 FT /gene="HLA-B" FT /allele="HLA-B*18NEW" FT CDS join(285..357,486..755,1002..1277,1850..2125,2230..2346, FT 2788..2820,2927..2970) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*18NEW" FT /product="MHC class I antigen" FT /protein_id="WAP48843.1" FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSHSMRYFHTSVSRPGRGEPR FT FISVGYVDGTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQISKTNTQTYRESLRN FT LRGYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHDQSAYDGKDYIALNEDQSSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGTCVEWLRRHLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT intron 358..485 FT /gene="HLA-B" FT /allele="HLA-B*18NEW" FT /number=1 FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*18NEW" FT /number=2 FT intron 756..1001 FT /gene="HLA-B" FT /allele="HLA-B*18NEW" FT /number=2 FT exon 1002..1277 FT /gene="HLA-B" FT /allele="HLA-B*18NEW" FT /number=3 FT intron 1278..1849 FT /gene="HLA-B" FT /allele="HLA-B*18NEW" FT /number=3 FT exon 1850..2125 FT /gene="HLA-B" FT /allele="HLA-B*18NEW" FT /number=4 FT intron 2126..2229 FT /gene="HLA-B" FT /allele="HLA-B*18NEW" FT /number=4 FT exon 2230..2346 FT /gene="HLA-B" FT /allele="HLA-B*18NEW" FT /number=5 FT intron 2347..2787 FT /gene="HLA-B" FT /allele="HLA-B*18NEW" FT /number=5 FT exon 2788..2820 FT /gene="HLA-B" FT /allele="HLA-B*18NEW" FT /number=6 FT intron 2821..2926 FT /gene="HLA-B" FT /allele="HLA-B*18NEW" FT /number=6 FT exon 2927..3982 FT /gene="HLA-B" FT /allele="HLA-B*18NEW" FT /number=7 FT 3'UTR 2971..3982 FT /gene="HLA-B" FT /allele="HLA-B*18NEW" XX SQ Sequence 3982 BP; 751 A; 1144 C; 1199 G; 888 T; 0 other; gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagagcct 60 tgtctgcatt ggggaggcgc agcattgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccct cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggctggtg 360 agtgcggggt cggcagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg 420 gcgcaggacc cggggagccg cgccgggagg agggtcgggc gggtctcagc ccctccttgc 480 cccaggctcc cactccatga ggtatttcca cacctccgtg tcccggcccg gccgcgggga 540 gccccgcttc atctcagtgg gctacgtgga cggcacccag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgaggacgg agccccgggc gccgtggata gagcaagagg ggccggagta 660 ttgggaccgg aacacacaga tctccaagac caacacacag acttaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcccccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggctcggg gggacggggc tgaccgcggg gccggggcca gggtctcaca ccctccagag 1020 gatgtacggc tgcgacgtgg ggccggacgg gcgcctcctc cgcgggcatg accagtccgc 1080 ctacgacggc aaggattaca tcgccctgaa cgaggaccag agctcctgga ccgcggcgga 1140 caccgcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcagctgag 1200 agcctacctg gagggcacgt gcgtggagtg gctccgcaga cacctggaga acgggaagga 1260 gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320 ccggggatgg cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct 1380 cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct 1440 ctaggacaat taagggatga cgtctctgag gaaatggagg ggaagacagt ccctagaata 1500 ctgatcaggg gtcccctttg acccctgcag cagccttggg aaccatgact tttcctctca 1560 ggccttgttc tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt 1620 cactttacct ccactcagat caggagcaga agtctctgtt ccccgctcag agactcgaac 1680 tttccaatga atagattatc ccaggtgcct gcgtccaggc tggtgtctgg gttctgtgcc 1740 ccttccccac cccaggtgtc ctgtccattc tcaggctggt cacatgggtg gtcctagggt 1800 gtcccatgag agatgcaaag cgcctgaatt ttctgactct tcccatcaga ccccccaaag 1860 acacatgtga cccaccaccc catctctgac catgaggcca ccctgaggtg ctgggccctg 1920 ggcttctacc ctgcggagat cacactgacc tggcagcggg atggcgagga ccaaactcag 1980 gacaccgagc ttgtggagac cagaccagca ggagatagaa ccttccagaa gtgggcagct 2040 gtggtggtgc cttctggaga agagcagaga tacacatgcc atgtacagca tgaggggctg 2100 ccgaagcccc tcaccctgag atggggtaag gagggggatg aggggtcata tctcttctca 2160 gggaaagcag gagcccttct ggagcccttc agcagggtca gggcccctca tcttcccctc 2220 ctttcccaga gccatcttcc cagtccacca tccccatcgt gggcattgtt gctggcctgg 2280 ctgtcctagc agttgtggtc atcggagctg tggtcgctac tgtgatgtgt aggaggaaga 2340 gctcaggtag ggaaggggtg aggggtgggg tctgggtttt cttgtcccac tgggggtttc 2400 aagccccagg tagaagtgtt ccctgcctca ttactgggaa gcagcatcca cacaggggct 2460 aacacagcct gggaccctgt gtgccagcac ttactctttt gtgcagcaca tgtgacaatg 2520 aaggacggat gtatcacctt gatggttgtg gtgttggggt cctgattcca gcattcatga 2580 gtcaggggaa ggtccctgct aaggacagac cttaggaggg cagttggtcc aggacccaca 2640 cttgctttcc tcgtgtttcc tgatcctgcc ttgggtctgt agtcatactt ctggaaattc 2700 cttttggttc caagacgagg aggttcctct aagatctcat ggccctgctt cctcccagtc 2760 ccctcacagg acattttctt cccacaggtg gaaaaggagg gagctactct caggctgcgt 2820 gtaagtggtg ggggtgggag tgtggaggag ctcacccacc ccataattcc tcctgtccca 2880 cgtctcctgc gggctctgac caggtcctgt ttttgttcta ctccagccag cgacagtgcc 2940 cagggctctg atgtgtctct cacagcttga aaaggtgaga ttcttggggt ctagagtggg 3000 cgggggggcg gggagggggc agaggggaaa ggcctgggta atggagattc tttgattggg 3060 atgtttcgcg tgtgtggtgg gctgttcaga gtgtcatcac ttaccatgac taaccagaat 3120 ttgttcatga ctgttgtttt ctgtagcctg agacagctgt cttgtgaggg accgagatgc 3180 aggatttctt cacgcctccc ctttgtgact tcaagagcct ctggcatctc tttctgcaaa 3240 ggcacctgaa tgtgtctgcg tccctgttag cataatgtga ggaggtggag agacagctca 3300 cccccgtgtc caccgtgacc cctgttccca tgctgacctg tgtttcctcc ccagtcatct 3360 ttcttgttcc agagaggtgg ggctggatgt ctccatctct gtctcaactt tatgtgcact 3420 gagctgcaac ttcttacttc cctactgaaa ataagaatct gaatataaat ttgttttctc 3480 aaatatttgc tatgagaggt tgatggatta attaaataag tcaattcctg gaatttgaga 3540 gagcaaataa agacctgaga accttccaga atctgcatgt tcgctgtgct gagtctgttg 3600 caggtggggt gtggagaagg ctgtgggggg ccgagtgtgg acggggcctg tgcccatttg 3660 gtgttgagtc catcatgggc tttatgtggt tagtcctcag ctgggtcacc ttcactgctc 3720 cattgtcctt gtcccttcag tggaaacttg tccagcggga gctgtgacca cagaggctca 3780 cacatcgccc agggcggccc ctgcacacgg gggtctctgt gcattctgag acaaattttc 3840 agagccattc acctcctgcc ctgcttctag agctcctttt ctgctctgct ctcctgccct 3900 ctctccctgc cctggttcta gtgatcttgg tgctgaatcc aatcccaact cctgaatctg 3960 taaagcagag tctaatttag ac 3982 //