Dbfetch

Dbfetch

ID   ON866886; SV 1; linear; genomic DNA; STD; HUM; 1696 BP.
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AC   ON866886;
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DT   14-JUN-2023 (Rel. 144, Created)
DT   15-JUN-2023 (Rel. 144, Last updated, Version 1)
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DE   Homo sapiens clone 4541600067 MHC class I antigen (HLA-C) gene,
DE   HLA-C*03:03:01 new allele, exons 1 through 7 and partial cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-1696
RA   Li X., Ding J., Liu Y., Lu F., Wang M., Wang J., Zhao Y., Guan P.,
RA   Zhang Y.;
RT   "Characterization of the novel HLA alleles";
RL   Unpublished.
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RN   [2]
RP   1-1696
RA   Li X., Ding J., Liu Y., Lu F., Wang M., Wang J., Zhao Y., Guan P.,
RA   Zhang Y.;
RT   ;
RL   Submitted (27-JUN-2022) to the INSDC.
RL   Institute of Transfusion, Blood Center of Heilongjiang Province, The Daowai
RL   Satellite Road 28, Harbin, Heilongjiang 150056, People's Republic of China
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DR   MD5; d313f6117de94d7932920558c5f981c7.
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..1696
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /country="China"
FT                   /clone="4541600067"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>1696
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:01 new"
FT   mRNA            join(<1..73,174..443,544..819,920..1195,1296..1415,
FT                   1516..1548,1649..>1696)
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:01 new"
FT                   /product="MHC class I antigen"
FT   CDS             join(1..73,174..443,544..819,920..1195,1296..1415,
FT                   1516..1548,1649..>1696)
FT                   /codon_start=1
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:01 new"
FT                   /product="MHC class I antigen"
FT                   /protein_id="WDY86171.1"
FT                   /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFYTAVSRPGRGEPH
FT                   FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN
FT                   LRGYYNQREARSHIIQRMYGCDVGPDGRLLRGYDQYAYDGKDYIALNEDLRSWTAADTA
FT                   AQITQRKWEAAREAEQLRAYLEGLCVEWLRRYLKNGKETLQRAEHPKTHVTHHPVSDHE
FT                   ATLRCWALGFYPAEITLTWQWDGEDQTQDTQLVETRPAGDGTFQKWAAVVVPSGEEQRY
FT                   TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG
FT                   KGGSCSQAASSNSAQGSDESLIACK"
FT   exon            <1..73
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:01 new"
FT                   /number=1
FT   exon            174..443
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:01 new"
FT                   /number=2
FT   exon            544..819
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:01 new"
FT                   /number=3
FT   exon            920..1195
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:01 new"
FT                   /number=4
FT   exon            1296..1415
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:01 new"
FT                   /number=5
FT   exon            1516..1548
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:01 new"
FT                   /number=6
FT   exon            1649..1696
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:01 new"
FT                   /number=7
XX
SQ   Sequence 1696 BP; 216 A; 328 C; 375 G; 177 T; 600 other;
     atgcgggtca tggcgccccg aaccctcatc ctgctgctct cgggagccct ggccctgacc        60
     gagacctggg ccgnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       120
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnngctccca       180
     ctccatgagg tatttctaca ccgctgtgtc ccggcccggc cgcggggagc cccacttcat       240
     cgcagtgggc tacgtggacg acacgcagtt cgtgcggttc gacagcgacg ccgcgagtcc       300
     gagaggggag ccgcgggcgc cgtgggtgga gcaggagggg ccggagtatt gggaccggga       360
     gacacagaag tacaagcgcc aggcacagac tgaccgagtg agcctgcgga acctgcgcgg       420
     ctactacaac cagagagagg ccannnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       480
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       540
     nnnggtctca catcatccag aggatgtatg gctgcgacgt ggggcccgac gggcgcctcc       600
     tccgcgggta tgaccagtac gcctacgacg gcaaggatta catcgccctg aacgaggatc       660
     tgcgctcctg gaccgccgcg gacacggcgg ctcagatcac ccagcgcaag tgggaggcgg       720
     cccgtgaggc ggagcagctg agagcctacc tggagggcct gtgcgtggag tggctccgca       780
     gatacctgaa gaatgggaag gagacgctgc agcgcgcggn nnnnnnnnnn nnnnnnnnnn       840
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       900
     nnnnnnnnnn nnnnnnnnna acacccaaag acacacgtga cccaccatcc cgtctctgac       960
     catgaggcca ccctgaggtg ctgggccctg ggcttctacc ctgcggagat cacactgacc      1020
     tggcagtggg atggggagga ccaaactcag gacactcagc ttgtggagac caggccagca      1080
     ggagatggaa ccttccagaa gtgggcagct gtggtggtgc cttctggaga agagcagaga      1140
     tacacgtgcc atgtgcagca cgaggggctg ccggagcccc tcaccctgag atgggnnnnn      1200
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1260
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnagccg tcttcccagc ccaccatccc      1320
     catcgtgggc atcgttgctg gcctggctgt cctggctgtc ctagctgtcc taggagctgt      1380
     ggtggctgtt gtgatgtgta ggaggaagag ctcagnnnnn nnnnnnnnnn nnnnnnnnnn      1440
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1500
     nnnnnnnnnn nnnnngtgga aaaggaggga gctgctctca ggctgcgtnn nnnnnnnnnn      1560
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1620
     nnnnnnnnnn nnnnnnnnnn nnnnnnnncc agcaacagtg cccagggctc tgatgagtct      1680
     ctcatcgctt gtaaag                                                      1696
//