Dbfetch
ID ON866570; SV 1; linear; genomic DNA; STD; HUM; 3429 BP. XX AC ON866570; XX DT 14-JUN-2023 (Rel. 144, Created) DT 15-JUN-2023 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens isolate DE-SMS_A-570429 nonfunctional MHC class I antigen DE (HLA-C) gene, HLA-C*07var allele, complete sequence. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3429 RA Busch Y., Trojok P., Shealy G., Schweizer A., Schaefer M., Peter W.; RT ; RL Submitted (14-JUN-2022) to the INSDC. RL HLA-Laboratory, Stefan-Morsch-Foundation, Dambacher Weg 3-5, Birkenfeld RL 55765, Germany XX DR MD5; b6b5a0cc24d7720cdc276da86d108066. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 2.25 CC Sequencing Technology :: Illumina; Oxford Nanopore Technologies CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3429 FT /organism="Homo sapiens" FT /isolate="DE-SMS_A-570429" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene 1..3429 FT /gene="HLA-C" FT /allele="HLA-C*07var" FT /note="nonfunctional MHC class I antigen; null allele" FT exon 1..397 FT /gene="HLA-C" FT /allele="HLA-C*07var" FT /number=1 FT 5'UTR 1..324 FT /gene="HLA-C" FT /allele="HLA-C*07var" FT intron 398..527 FT /gene="HLA-C" FT /allele="HLA-C*07var" FT /number=1 FT exon 528..797 FT /gene="HLA-C" FT /allele="HLA-C*07var" FT /number=2 FT intron 798..1047 FT /gene="HLA-C" FT /allele="HLA-C*07var" FT /number=2 FT exon 1048..1323 FT /gene="HLA-C" FT /allele="HLA-C*07var" FT /number=3 FT intron 1324..1910 FT /gene="HLA-C" FT /allele="HLA-C*07var" FT /number=3 FT exon 1911..2186 FT /gene="HLA-C" FT /allele="HLA-C*07var" FT /number=4 FT intron 2187..2310 FT /gene="HLA-C" FT /allele="HLA-C*07var" FT /number=4 FT exon 2311..2430 FT /gene="HLA-C" FT /allele="HLA-C*07var" FT /number=5 FT intron 2431..2870 FT /gene="HLA-C" FT /allele="HLA-C*07var" FT /number=5 FT exon 2871..2903 FT /gene="HLA-C" FT /allele="HLA-C*07var" FT /number=6 FT intron 2904..3010 FT /gene="HLA-C" FT /allele="HLA-C*07var" FT /number=6 FT exon 3011..3058 FT /gene="HLA-C" FT /allele="HLA-C*07var" FT /number=7 FT intron 3059..3222 FT /gene="HLA-C" FT /allele="HLA-C*07var" FT /number=7 FT exon 3223..3429 FT /gene="HLA-C" FT /allele="HLA-C*07var" FT /number=8 FT 3'UTR 3228..3429 FT /gene="HLA-C" FT /allele="HLA-C*07var" XX SQ Sequence 3429 BP; 639 A; 1013 C; 1063 G; 714 T; 0 other; tcaggcacac agtgtgacaa agatgcttgg tgtaggagaa gagggatcag gacgaagtcc 60 caggtcccgg gcggggctct cagggtctca ggctccaagg gccgtgtctg cattggggag 120 gcgccgcgtt ggggattctc cactcccctg agtttcactt ctcccaacct gcgtcgggtc 180 cttcttcctg aatactcatg acgcgtcccc aattcccact cccattgggt gtcgggttct 240 agagaagcca atcagcgtct ccgcagtccc ggttctaaag tccccagtca cccacccgga 300 ctcacattct ccccagaggc cgagatgcgg gtcatggcgc cccgagccct cctcctgctg 360 ctctcgggag gcctggccct gaccgagacc tgggcctgtg agtgcggggt tgggagggaa 420 gcggcctctg cggagaggag cgaggggccc tcccggcgag ggcgcaggac ccggggagcc 480 gcgcagggag gtgggtcggg cgggtctcag cccctcctcg cccccaggct cccactccat 540 gaggtatttc gacaccgccg tgtcccagcc cggccgcgga gagccccgct tcatctcagt 600 gggctacgtg gacgacacgc agttcgtgcg gttcgacagc gacgccgcga gtccgagagg 660 ggagccgcgg gcgccgtggg tggagcagga ggggccggag tattgggacc gggagacaca 720 gaagtacaag cgctaggcac aggctgaccg agtgagcctg cggaacctgc gcggctacta 780 caaccagagc gaggacggtg agtgaccccg gcccggggcg caggtcacga cccctcccca 840 tcccccacgg acggcccggg tcgcccagag tctccccgtc tgagatccac cccaaggtgg 900 atctgcggaa cccgcccaga ccctcgaccg gagagagccc cagtcgcctt tacccggttt 960 cattttcggt ttaggccaaa atccccgcgg gttggtcggg gcggggcggg gctcggggga 1020 ctgggctgac cgcgggggcg gggccagggt ctcacaccct ccagaggatg tctggctgcg 1080 acctggggcc cgacgggcgc ctcctccgcg ggtatgacca gtccgcctac gacggcaagg 1140 attacatcgc cctgaacgag gacctgcgct cctggaccgc cgcggacacc gcggctcaga 1200 tcacccagcg caagttggag gcggcccgtg cggcggagca gctgagagcc tacctggagg 1260 gcacgtgcgt ggagtggctc cgcagatacc tggagaacgg gaaggagacg ctgcagcgcg 1320 caggtaccag gggcagtggg gagccttccc catctcctat agatctcccg ggatggcctc 1380 ccacgaggag gggaggaaaa tgggatcagc actggaatat cgccctccct tgaatggaga 1440 atggcatgag ttttcctgag tttcctctga gggccccctc tgctctctag gacaattaag 1500 ggatgaagtc tctgaggaaa tggaggggaa gacagtccct ggaatactga tcaggggtct 1560 cctttgacca ctttgaccac tgcagcagct gtggtcaggc tgctgacctt tctctcaggc 1620 cttgttctct gcctcacact caatgtgtct gaaggtttga ttccagcttt tctgagtcct 1680 gcagcctcca ctcaggtcag gaccagaagt cgctgttcct ccctcagaga ctagaacttt 1740 ccaatgaata ggagattatc ccaggtgcct gtgtccaggc tggcgtctgg gttctgtgcc 1800 gccttcccca ccccaggtgt cctgtccatt ctcaggatgg tcacatgggc gctgctggag 1860 tgtcccaaga gagatgcaaa gtgtctgaat tttctgactc ttcccgtcag aacccccaaa 1920 gacacacgtg acccaccacc ccctctctga ccatgaggcc accctgaggt gctgggccct 1980 gggcttctac cctgcggaga tcacactgac ctggcagcgg gatggggagg accagaccca 2040 ggacaccgag cttgtggaga ccaggccagc aggagatgga accttccaga agtgggcagc 2100 tgtggtggtg ccttctggac aagagcagag atacacgtgc catatgcagc acgaggggct 2160 gcaagagccc ctcaccctga gctggggtaa ggaggggaat ggggggtcac atctcttatc 2220 agagaaagca gaagtccttc tggagccctt cagccgggtc agggctgagg cttgggggtc 2280 agggcccctc accttctcct cctttcccag agccatcttc ccagcccacc atccccatca 2340 tgggcatcgt tgctggcctg gctgtcctgg ttgtcctagc tgtccttgga gctgtggtca 2400 ccgctatgat gtgtaggagg aagagctcag gtagggaagg ggtgaagagc ggggtctggg 2460 ttttcttgtc ccactgggag tttcaagccc caggtagaag tgtgccccgc cttgttactg 2520 gaagcaccat ccacacatgg gccatcccag cctgggaccc tgtgtgccag cacttactct 2580 tttgtgaagc acatgtgaca atgaaggacg gatgtatcac cttgatgatt atggtgttgg 2640 ggtcctgatt ccagcattca tgagtcaggg gaaggtccct gctaaggaca gaccttagga 2700 gggcagttgg tccagaaccc acaactgctt tccccatgtt tcctgatcct gccctgggtc 2760 tgcagtcgta gttctggaaa cttctcttgg gtccaagact aggaggttcc cctaagatca 2820 catggccctg cctcctccca gtcccctcat agggcatttt cttcccacag gtggaaaagg 2880 agggagctgc tctcaggctg cgtgtaagtg atggcggcgg gcgtgtggag gagctcacct 2940 actccataat tcctcttgtc ccacatctcc tgcgggctct gaccaggtct ttttttttgt 3000 tctaccccag gcagcaacag tgcccagggc tctgatgagt ctctcatcac ttgtaaaggt 3060 gagattctgg ggagctgaag tggtcggggg tggggcagag ggaaaaggcc tgggtaatgg 3120 ggattctttg attgggacgt ttcgagtgtg tggtgggccg ttcagagtgt catcgcttac 3180 catgactgac ctgaatttgt tcatgactat tgtgttctgt agcctgagac agctgcctgt 3240 gtgggactga gatgcaggat ttcttcacac ctctcctttg tgacttcaag agcctctggc 3300 atctctttct gcaaaggcac ctgaatgtgt ctgcgttcct gttagcataa tgtgaggagg 3360 tggagagaca gcccaccccc gtgtccaccg tgacccctgt ccccacactg acctgtgttc 3420 cctccccga 3429 //