Dbfetch
ID ON809566; SV 1; linear; genomic DNA; STD; HUM; 1083 BP.
XX
AC ON809566;
XX
DT 23-JAN-2024 (Rel. 144, Created)
DT 24-JAN-2024 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens MHC class II antigen (HLA-DPA1) gene, HLA-DPA1*02:01:21
DE allele, complete cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RC Publication Status: Available-Online prior to print
RP 1-1083
RX PUBMED; 36401736.
RA Cargou M., Andreani M., Giustiniani P., Guidicelli G., Visentin J.;
RT "Characterization of the novel HLA-DPA1*02:01:21 allele by sequencing-based
RT typing";
RL HLA:(2023).
XX
RN [2]
RP 1-1083
RA Cargou M., Andreani M., Gustiniani P., Guidicelli G., Visentin J.;
RT ;
RL Submitted (20-JUN-2022) to the INSDC.
RL Laboratoire d'Immunologie et d'Immunogenetique, CHU Bordeaux, Place Amelie
RL Raba Leon, Bordeaux, Gironde 33076, France
XX
DR MD5; dce1cba109ecde7862b122b0a11d2a8e.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: TypeStream Visual v. 2.1
CC Sequencing Technology :: IonTorrent
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..1083
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>1083
FT /gene="HLA-DPA1"
FT /allele="HLA-DPA1*02:01:21"
FT mRNA join(<1..100,201..446,547..828,929..>1083)
FT /gene="HLA-DPA1"
FT /allele="HLA-DPA1*02:01:21"
FT /product="MHC class II antigen"
FT CDS join(1..100,201..446,547..828,929..1083)
FT /codon_start=1
FT /gene="HLA-DPA1"
FT /allele="HLA-DPA1*02:01:21"
FT /product="MHC class II antigen"
FT /protein_id="WCI15318.1"
FT /translation="MRPEDRMFHIRAVILRALSLAFLLSLRGAGAIKADHVSTYAAFVQ
FT THRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAILNNNLNTL
FT IQRSNHTQAANDPPEVTVFPKEPVELGQPNTLICHIDRFFPPVLNVTWLCNGEPVTEGV
FT AESLFLPRTDYSFHKFHYLTFVPSAEDVYDCRVEHWGLDQPLLKHWEAQEPIQMPETTE
FT TVLCALGLVLGLVGIIVGTVLIIKSLRSGHDPRAQGPL"
XX
SQ Sequence 1083 BP; 168 A; 221 C; 215 G; 179 T; 300 other;
atgcgccctg aagacagaat gttccatatc agagctgtga tcttgagagc cctctccttg 60
gctttcctgc tgagtctccg aggagctggg gccatcaagg nnnnnnnnnn nnnnnnnnnn 120
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 180
nnnnnnnnnn nnnnnnnnnn cggaccatgt gtcaacttat gccgcgtttg tacagaccca 240
tagaccaaca ggggagttta tgtttgaatt tgatgaagat gagcagttct atgtggatct 300
ggataaaaag gagaccgtct ggcatctgga ggagtttggc cgagcctttt cctttgaggc 360
tcagggcggg ctggctaaca ttgctatatt gaacaacaac ttgaatacct tgatccagcg 420
ttccaaccac actcaggccg ccaatgnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 540
nnnnnnatcc ccctgaggtg accgtgtttc ccaaggagcc tgtggagctg ggccagccca 600
acaccctcat ctgccacatt gacaggttct tcccaccagt gctcaacgtc acatggctgt 660
gcaatgggga gccagtcact gagggtgtcg ctgagagcct cttcctgccc agaacagatt 720
acagcttcca caagttccat tacctgacct ttgtgccctc agcagaggac gtctatgact 780
gcagggtgga gcactggggc ttggaccagc cgctcctcaa gcactgggnn nnnnnnnnnn 840
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 900
nnnnnnnnnn nnnnnnnnnn nnnnnnnnag gcccaagagc caatccagat gcctgagaca 960
acagagactg tgctctgtgc cctgggcctg gtgctgggcc tagtgggcat catcgtgggc 1020
accgtcctca tcataaagtc tctgcgttct ggccatgacc cccgggccca ggggcccctg 1080
tga 1083
//