Dbfetch
ID ON392758; SV 1; linear; genomic DNA; STD; HUM; 5777 BP. XX AC ON392758; XX DT 17-JUL-2022 (Rel. 144, Created) DT 05-AUG-2022 (Rel. 144, Last updated, Version 2) XX DE Homo sapiens MHC class II antigen (HLA-DQA1*) gene, HLA-DQA1*04NEW allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5777 RA Sanchez Gordo Fd.P.; RT ; RL Submitted (29-APR-2022) to the INSDC. RL Tipaje HLA, Centro de Transfusion Sanguinea y Banco de tejidos, Avda Galvez RL Ginachero s/n, Malaga 29009, Spain XX DR MD5; dada60f0da08179c88ba38f6a800d71a. XX CC ##Assembly-Data-START## CC Assembly Method :: Type Stream Visual -One Lambda v. 2.1.0 CC Sequencing Technology :: IonTorrent CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..5777 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <276..>5668 FT /gene="HLA-DQA1*" FT /allele="HLA-DQA1*04NEW" FT mRNA join(<276..357,4211..4456,4869..5150,5514..>5668) FT /gene="HLA-DQA1*" FT /allele="HLA-DQA1*04NEW" FT /product="MHC class II antigen" FT CDS join(276..357,4211..4456,4869..5150,5514..5668) FT /codon_start=1 FT /gene="HLA-DQA1*" FT /allele="HLA-DQA1*04NEW" FT /product="MHC class II antigen" FT /protein_id="UTH39006.1" FT /translation="MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPS FT GQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFDPQFALTNIAVTKHNLNILIKRSNS FT TAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFL FT SKSDHSLFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCAL FT GLSVGLVGIVVGTVFIIRGLRSVGASRHQGPL" XX SQ Sequence 5777 BP; 1698 A; 1213 C; 1280 G; 1586 T; 0 other; atttagtgtc ctccctctat tcatagaata tttcctcaag tccactctga gtggaggctg 60 cgtcacaacc aggggatttc cctgtctcct tccagggctc ttaatacaaa ctcttcaact 120 agtaactgag gtgtcatcat aggggagttt tctaattagc caaaacctga cctggcaggg 180 tttggtttgg gtgtcttcag atttgcttgt ctcgaggtcc tcacaattgc tctacagctc 240 agagcagcaa ctgctgaggc tgccttggga agaggatgat cctaaacaaa gctctgctgc 300 tgggggccct tgccctgacc accgtgatga gcccctgtgg aggtgaagac attgtgggtg 360 agtgcatgag tgagggatgt tctctggagc tggaagagag gaaatcgaag aaaagagaga 420 aagcgatttt gcagagaaat tgtagagatt tcctaagggc cccttcagta ttaagagatt 480 taaaaattac ggctgtttct ccttcaggaa accagagtcc caacctactc tttttgttat 540 ctatgctgtt ggcgttcact aaggatgcta ttctgtttat attgtattca gtcactacag 600 cctggaggtc tctatgtcat tccatcatga ctgcctcaaa aattggtgag gtttccatca 660 gtcgataatt ttttattatt aaaaatttgt gaagtatcat tctcaaattt ccctgaacaa 720 cttttgaagc ttttcggatg tctcctgtag tagaccttgg ggtaaatgat tccatcaatt 780 atatactcta tagatattaa gaaagatgcc cttttctttc tctcagactt acttacattt 840 ccacatggga actggcacag gtggggagtg ggtaaaggag tccagcaggc tgaatgcctt 900 caacaatcat tttaccacat ggtcctcact tactctcagc tgcctcattt gtgtcacctc 960 acaaataatc aaataaaatg ggcatgtagt taagctttgt aaatagtgaa aacatgaatg 1020 tcaattttat ttttacatat ttccattata ggagtagctt cacatttctt ttctttagca 1080 aaataaggaa tccttttatt ttaaaattga gaatttatag tagaaaaact tgctaaatta 1140 aatcattttg ttctcaaatt atcaacccaa attacctgtt gttcacctca tctaatgaag 1200 tcctataaaa agaaaagtgg gttagacatg gtggctcatg cctgtaatcc cagcactttg 1260 ggaggctgag gcaggaggat cctttgagcc caggagttcg agaccagcct gggcaacata 1320 gcaagacctc atctctacaa aaaataaaaa ttagccaggt gtggtggtgc gtgcctgggt 1380 gccagctact cagaaggctg caatgggagg actgcttgag tccaggaggc ggaagctgca 1440 gtgagccatg atggcaccac tacactccag ccagggcaac agagagagac cctgtcccaa 1500 aaagaaagag gaaagaaaga gagaaaggaa ggaaagaaag aaagaaggaa gtaaggaagg 1560 aaagaaggaa ggaagggaga aggggaaggg aagggaagga aggaaggaaa gggaagggag 1620 gaaagaagga aggaaaaaag aaaaagaaag aaagtagaaa ggaagaaaga agaaagaaag 1680 aagaaagaaa ggaaagaaaa gagggaagga aagaaagaag aaggaaggaa gcacagatta 1740 attattaatt atttggtctc tcttagtctc ctctgtcttt gttgtccatc tcttcctacc 1800 cctcttcatg cattcctttc tccctcttcc ctttcaggat ccatctctga ctccctgctt 1860 ctttatatgg acagtgggtt tgtaaaacaa aagttgaaaa atcagatagt taaaaggtga 1920 agtgaactgg aaggtctaaa cttccacaac cttattaacc atggctgctc ccattctgat 1980 tttgttcggc agtggaagtt ccacctgctt ctccagagca cttggcttct ttgttccaaa 2040 tttcctttct tcaacctcac accagagtgc cctggtcagg ctcggctcat ccattaggca 2100 caacgtgggc aatgcagaga accctccata ctgtaaagcc acatgagaat gttttaactc 2160 cttttaagat tagaaaaaaa tgaaatttca gagcccaaga aaatgtttta attcagccta 2220 gattgtattg tctttatacc aattcagtca taaaatacaa ttttccatat ttttatggag 2280 gaaggggccc acaaaagcaa gagtgcttag ggctcacatg tcagaacgca gccctggtca 2340 tggctgatcc tggccttcgt atgattctgc tagtgtgcct gtccgtcttc cccagaatct 2400 atgtggtcct caaatatagc aactgtaatt caaaacacgt ttgagcacac agtaagctaa 2460 gttttaagga ttcaaagacg aaaagtcatg ctgtcttccc tgcagagggt gctcagacta 2520 gtgatggaaa cagtatggga tgcaggaaag cagaaggcca ttgctgagca gggcagtgga 2580 ctcagcagag gctgaaacta tacaaatgac ttggttccag ctgggccagc agggtgacat 2640 cctccagcaa aactcggcac ccaagacaag tcccagatga aaagaaggat tgctttgtgt 2700 ttgataagga gtcaaggttt attgcaagga taagaaggct ttgttggtgg cctgttaaga 2760 ccatccaggg cagtcatact ggataaggag gaaggtgagc tggaagagga acagacaaac 2820 agccagatat tgagatggaa gaggtggagg tcataacgtg gtaaaaaata tgttgatgag 2880 aggacttagc tacaaagttg ttaacttaag cataaaccgc aaggatgaat tttaggattt 2940 ctccaggaag tcctaaaaga taatttcatt tcagggagaa aaacaacaaa ccactgcaaa 3000 gaccaggcaa cacgaaagga taatgtagtt ttgtttgctt ggcagatact tatgaaagat 3060 gttggactgt aaggctgttg atagcctcct cacagaacgt gctacagtac attgtatcta 3120 ctcccttacc tacctgactc ttccactgtt cagtttgttt cttaatggta gaccatgcct 3180 gattggtgtt ttacacatcc cctgctatgt ctgacacttg tgaatgctca gaaagtgggg 3240 aaggaaggaa agatacaaca gtaaaaggct tacacgtctt gacaagaatg tccagttcgg 3300 ctcatttggc tggagccata tcgcatggct gccattctgc tctggcatcc tcagacaagc 3360 acactgccca ttagaggaaa aagggtttaa tttagctgag tcctcaagtg aatataagtg 3420 ttaagtcaga acactgtaga catttagtaa cctccttcag aggaaaaaaa aaaaaaggtg 3480 gggggaaatg acagaaatcc aaaaactagt agagcttcca ctcttcattt cagaagaaat 3540 cagttgctct cctctaagga tcattactat taacaaaaca gagaccttga aggaggcatt 3600 gtttatttat tatatatttt gtaatgttat taccattctt gttatactct ttcttatacc 3660 ctacaattgt tagcaaacat tattttaaat taataagatc ctgcatgctt ttcctttttt 3720 aaaaaaaaga aagacctctg tgtagagtgt cctgttctga gccagtcctg agaggaaaga 3780 aagtacaatc agtttgttat taactgatga aagaattaag tgaaagatga atcttaggaa 3840 gcagagggaa gtaaacctag tctctgacta agaaagctaa ataccataat aactcattca 3900 ttccttcttt tgttcaatta cagtatttaa tcgtaagtcc atgatgtgcc aggcactcag 3960 gaaatagtaa aaactggaca tgtgatattc tgcccttgtg tagcacacat tatagtggga 4020 aagaaagcgc aattttaacc ggacaactac caacactaag agcggaggaa gcaggggctg 4080 gaaatgtcca caggctgtgc caaagatgaa gctcgtaata tttgaaagtc agtttcttcc 4140 atcattttgt gtattaaggt tctttcttcc cctgttctcc accttcttgc ttgtcatctt 4200 cactcatcag ctgaccatgt tgcctcttat ggtgtaaact tgtaccagtc ttacggtccc 4260 tctggccagt acacccatga atttgatgga gacgagcagt tctacgtgga cctggggagg 4320 aaggagactg tctggtgttt gcctgttctc agacaattta gatttgaccc gcaatttgca 4380 ctgacaaaca tcgctgtgac aaaacacaac ttgaacatcc tgattaaacg ctccaactct 4440 actgctgcta ccaatggtat gtgtccacaa ttctgcccct ctttactgat ctatcccttc 4500 ataccaagtt tcattatttt acttccaaga ggtccccaga tcttctcatg gcaattgctg 4560 aaattctatc acttcccatc tctaaaatca catattccca tgtaatacaa gggtctttcc 4620 attatccatt cattaaatcc ttctaggaga ggtctcatca acctcctact ttattaaaca 4680 tgcccacaga gagaagggca taggaataaa gcagaggcaa tgtgtcgttg ctcccaagca 4740 gaaggtaaat aagacctctt tgactatcag gtggtgaaat gctggtagga gggctcttcc 4800 aggatgtaat gcagaagctc atggcagagc tattcacact tcacatcagt gctgtttcct 4860 caccacagag gttcctgagg tcacagtgtt ttccaagtct cctgtgacgc tgggtcagcc 4920 caacaccctc atctgtcttg tggacaacat ctttcctcct gtggtcaaca tcacatggct 4980 gagcaatggg cactcagtca cagaaggtgt ttctgagacc agcttcctct ccaagagtga 5040 tcattccctc ttcaagatca gttacctcac cttcctccct tctgctgatg agatttatga 5100 ctgcaaggtg gagcactggg gcctggacga gcctcttctg aaacactggg gtaaggatga 5160 gttccaccac tttttgatgc tttcttgtct gtcaagttca gaacttcctg ccttttactc 5220 ctatatccca aaacttgttt ttcacacttc atgggtttct ttctttcttt tgaaagaata 5280 aagcaacaaa agcaaagatt tattgaaaat gaaagtacac ttcacagggt gggaacgggc 5340 ctgagcatag gggctcaaga gccacttcat gggtttctaa tgatagactt cactctcctc 5400 cctaagctga ggaccttgag tctttgcaga gccaaccctc caccccatcc catcccacac 5460 acatgcacat gagcacactc tgctttctga cctcaacgac ttcatatcca cagagcctga 5520 gattccagcc cctatgtcag agctcacaga gactgtggtc tgcgccctgg gattgtctgt 5580 gggcctcgtg ggcattgtgg tgggcactgt cttcatcatc cgaggcctgc gttcagttgg 5640 tgcttccaga caccaagggc ccttgtgaat cccatcctgg aagggaaggt aagattgaga 5700 tttgttagag ctgaatccgc agtatgagag gaaggaaagt ggaggaggct gtggacaaga 5760 atggttgaaa gttgtag 5777 //