Dbfetch
ID ON246006; SV 1; linear; genomic DNA; STD; HUM; 4081 BP. XX AC ON246006; XX DT 14-JUN-2023 (Rel. 144, Created) DT 15-JUN-2023 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens clone H-956 MHC class I protein (HLA-B) gene, DE HLA-B-B*400102var allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-4081 RA Khor S.-S., Ito I., Sato T., Tokunaga K.; RT ; RL Submitted (15-APR-2022) to the INSDC. RL Genome Medical Science Project, National Center for Global Health and RL Medicine, Toyama 1-21-1, Shinjuku Ward, Tokyo 162-8655, Japan XX DR MD5; 5f619dbaffa0b2029f10ae04e92be1b0. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 2.25.0.25342 CC Sequencing Technology :: PacBio CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..4081 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="H-956" FT /db_xref="taxon:9606" FT gene <1..>4081 FT /gene="HLA-B" FT /allele="B*400102var" FT mRNA join(<1..357,486..755,1001..1276,1851..2126,2220..2336, FT 2778..2810,2917..>4081) FT /gene="HLA-B" FT /allele="B*400102var" FT /product="MHC class I protein" FT exon <1..357 FT /gene="HLA-B" FT /allele="B*400102var" FT /number=1 FT 5'UTR <1..284 FT /gene="HLA-B" FT /allele="B*400102var" FT CDS join(285..357,486..755,1001..1276,1851..2126,2220..2336, FT 2778..2810,2917..2960) FT /codon_start=1 FT /gene="HLA-B" FT /allele="B*400102var" FT /product="MHC class I protein" FT /protein_id="WCB27343.1" FT /translation="MRVTAPRTVLLLLSAALALTETWAGSHSMRYFHTAMSRPGRGEPR FT FITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRESLRN FT LRGYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTA FT AQISQRKLEAARVAEQLRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT exon 486..755 FT /gene="HLA-B" FT /allele="B*400102var" FT /number=2 FT exon 1001..1276 FT /gene="HLA-B" FT /allele="B*400102var" FT /number=3 FT exon 1851..2126 FT /gene="HLA-B" FT /allele="B*400102var" FT /number=4 FT exon 2220..2336 FT /gene="HLA-B" FT /allele="B*400102var" FT /number=5 FT exon 2778..2810 FT /gene="HLA-B" FT /allele="B*400102var" FT /number=6 FT exon 2917..>4081 FT /gene="HLA-B" FT /allele="B*400102var" FT /number=7 FT 3'UTR 2961..>4081 FT /gene="HLA-B" FT /allele="B*400102var" FT variation 3384 FT /gene="HLA-B" FT /note="c3384a" FT variation 3414 FT /gene="HLA-B" FT /note="c3414g" FT variation 3441 FT /gene="HLA-B" FT /note="g3441a" XX SQ Sequence 4081 BP; 769 A; 1146 C; 1239 G; 927 T; 0 other; gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagcgtcg ccgtggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcac 300 cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc ggcagggaaa tggcctctgt ggggaggagc gaggggaccg caggcggggg 420 cgcaggaccc ggggagccgc gccgggagga gggtcgggcg ggtctcagct cctcctcgcc 480 cccaggctcc cactccatga ggtatttcca caccgccatg tcccggcccg gccgcgggga 540 gccccgcttc atcaccgtgg gctacgtgga cgacacgctg ttcgtgaggt tcgacagcga 600 cgccacgagt ccgaggaagg agccgcgggc gccatggata gagcaggagg ggccggagta 660 ttgggaccgg gagacacaga tctccaagac caacacacag acttaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgaccccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggctcggg ggactgggct gaccgcgggg ccggggccag ggtctcacac cctccagagg 1020 atgtacggct gcgacgtggg gccggacggg cgcctcctcc gcgggcataa ccagtacgcc 1080 tacgacggca aggattacat cgccctgaac gaggacctgc gctcctggac cgccgcggac 1140 acggcggctc agatctccca gcgcaagttg gaggcggccc gtgtggcgga gcagctgaga 1200 gcctacctgg agggcgagtg cgtggagtgg ctccgcagat acctggagaa cgggaaggac 1260 aagctggagc gcgctggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc 1320 cggggatggc ctcccacgag aagaggagga aaatgggatc agcgctagaa tgtcgccctc 1380 cgttgaatgg agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc 1440 tagacaatta aggaatgacg tctctgagga aatggagggg aagacagtcc ctagaatact 1500 gatcaggggt cccctttgac ccctgcagca gccttgggaa ccgtgacttt tcctctcagg 1560 ccttgttctc tgcctcacac tcagtgtgtt tggggctctg attccagcac ttctgagtca 1620 ctttacctcc actcagatca ggagcagaag tccctgttcc ccgctcagag actcgaactt 1680 tccaatgaat aggagattat cccaggtgcc tgcgtccagg ctggtgtctg ggttctgtgc 1740 cccttcccca ccccaggtgt cctgtccatt ctcaggctgg tcacatgggt ggtcctaggg 1800 tgtcccatga aagatgcaaa gcgcctgaat tttctgactc ttcccatcag accccccaaa 1860 gacacacgtg acccaccacc ccatctctga ccatgaggcc accctgaggt gctgggccct 1920 gggtttctac cctgcggaga tcacactgac ctggcagcgg gatggcgagg accaaactca 1980 ggacactgag cttgtggaga ccagaccagc aggagataga accttccaga agtgggcagc 2040 tgtggtggtg ccttctggag aagagcagag atacacatgc catgtacagc atgaggggct 2100 gccgaagccc ctcaccctga gatggggtaa ggagggggat gaggggtcat atctcttctc 2160 agggaaagca ggagcccttc agcagggtca gggcccctca tcttcccctc ctttcccaga 2220 gccgtcttcc cagtccaccg tccccatcgt gggcattgtt gctggcctgg ctgtcctagc 2280 agttgtggtc atcggagctg tggtcgctgc tgtgatgtgt aggaggaaga gttcaggtag 2340 ggaaggggtg aggggtgggg tctgggtttt cttgtcccac tgggggtttc aagccccagg 2400 tagaagtgtt ccctgcctca ttactgggaa gcagcatgca cacaggggct aacgcagcct 2460 gggaccctgt gtgccagcac ttactctttt gtgcagcaca tgtgacaatg aaggatggat 2520 gtatcacctt gatggttgtg gtgttggggt cctgattcca gcattcatga gtcaggggaa 2580 ggtccctgct aaggacagac cttaggaggg cagttggtcc aggacccaca cttgctttcc 2640 tcgtgtttcc tgatcctgcc ctgggtctgt agtcatactt ctggaaattc cttttgggtc 2700 caagactagg aggttcctct aagatctcat ggccctgctt cctcccagtg ccctcacagg 2760 acattttctt cccacaggtg gaaaaggagg gagctactct caggctgcgt gtaagtggtg 2820 ggggtgggag tgtggaggag ctcacccacc ccataattcc tcctgtccca cgtctcctgc 2880 gggctctgac caggtcctgt ttttgttcta ctccaggcag cgacagtgcc cagggctctg 2940 atgtgtctct cacagcttga aaaggtgaga ttcttggggt ctagagtggg tggggtggcg 3000 ggtctggggg tgggtggggc agaggggaaa ggcctgggta atggggattc tttgattggg 3060 atgtttcgcg tgtgtggtgg gctgtttaga gtgtcatcgc ttaccatgac taaccagaat 3120 ttgttcatga ctgttgtttt ctgtagcctg agacagctgt cttgtgaggg actgagatgc 3180 aggatttctt cacgcctccc ctttgtgact tcaagagcct ctggcatctc tttctgcaaa 3240 ggcacctgaa tgtgtctgcg tccctgttag cataatgtga ggaggtggag agacagccca 3300 cccttgtgtc cactgtgacc cctgttccca tgctgacctg tgtttcctcc ccagtcatct 3360 ttcttgttcc agagaggtgg ggctggatgt ctccatctct gtctcaactt tacgtgcact 3420 gagctgcaac ttcttacttc cctactgaaa ataagaatct gaatataaat ttgttttctc 3480 aaatatttgc tatgagaggt tgatggatta attaaataag tcaattcctg gaatttgaaa 3540 gagcaaataa agacctgaga accttccaga atctgcatgt tcgctgtgct gagtctgttg 3600 caggtggggt gtggagaagg ctgtgggggg ccgagtgtgg atggggcctg tgcccatttg 3660 gtgttgagtc catcatgggc tttatgtggt tagtcctcag ctgggtcacc ttcactgctc 3720 cattgtcctt gtcccttcag tggaaacttg tccagcggga gctgtgacca cagaggctca 3780 cacatcgccc agggtggccc ctgcacacgg gggtctctgt gcattctgag acaaattttc 3840 agagccattc acctcctgcc ctgcttctag agctcctttt ctgctctgct ctcctgccct 3900 ctctccctgc cctggttcta gtgatcttgg tgctgaatcc aatcccaact catgaatctg 3960 taaagcagag tctaatttag agttacattt gtctgtgaaa ttggacccat catcaaggac 4020 tgttctttcc tgaagagaga acctgattgt gtgctgcagt gtgctggggc agggggtgcg 4080 g 4081 //