Dbfetch
ID ON169981; SV 1; linear; genomic DNA; STD; HUM; 3625 BP. XX AC ON169981; XX DT 14-JUN-2023 (Rel. 144, Created) DT 15-JUN-2023 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens isolate 11200101596 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*12extended allele, exons 2 through 4 and partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3625 RA Kumar P., Shah S., Shah P., Chaudhary A., Thakker N.C., Kumar H., Buch H., RA Parihar D.; RT ; RL Submitted (05-APR-2022) to the INSDC. RL Neuberg Center for Genomics Medicine, Neuberg Supratech Reference RL Laboratories, 4th Floor, Kedar Building, Opp. Krupa Petrol Pump, Near RL Parimal Garden, Ahmedabad, Gujarat 380006, India XX DR MD5; 8ee1687e502dfc28d95c4627e1f9d2ad. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 2.25 CC Assembly Name :: HLA-DRB1 CC Coverage :: Partial CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3625 FT /organism="Homo sapiens" FT /isolate="11200101596" FT /mol_type="genomic DNA" FT /country="India" FT /isolation_source="whole blood edta" FT /db_xref="taxon:9606" FT gene <1..>3625 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*12extended" FT mRNA join(<96..365,2645..2926,3622..>3625) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*12extended" FT /product="MHC class II antigen" FT CDS join(<96..365,2645..2926,3622..>3625) FT /codon_start=3 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*12extended" FT /product="MHC class II antigen" FT /note="MHC class II DR beta chain" FT /protein_id="WCC72460.1" FT /translation="RFLEYSTGECYFFNGTERVRLLERHFHNQEELLRFDSDVGEFRAV FT TELGRPVAESWNSQKDFLEDRRAAVDTYCRHNYGAVESFTVQRRVHPKVTVYPSKTQPL FT QHHNLLVCSVSGFYPGSIEVRWFRNGQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSVTSLLTVEWRA" FT exon 96..365 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*12extended" FT /number=2 FT exon 2645..2926 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*12extended" FT /number=3 FT exon 3622..>3625 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*12extended" FT /number=4 XX SQ Sequence 3625 BP; 888 A; 709 C; 902 G; 1126 T; 0 other; cctgcacccc acccagggag ccccggatgg tggcgtcgct gtcagtgtct tctcaggagg 60 ccacctgtgt gactggatcg ttcgtgtccc cacagcacgt ttcttggagt actctacggg 120 tgagtgttat ttcttcaatg ggacggagcg ggtgcggtta ctggagagac acttccataa 180 ccaggaggag ctcctgcgct tcgacagcga cgtgggggag ttccgggcgg tgacggagct 240 ggggcggcct gtcgccgagt cctggaacag ccagaaggac ttcctggaag acaggcgcgc 300 cgcggtggac acctattgca gacacaacta cggggctgtg gagagcttca cagtgcagcg 360 gcgaggtgag cgcggcgcgg ggcggggcct gagtccctgt gagctgggaa tctgagtgtg 420 tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg 480 tgtgagagag agagagagag agagagagag agagagagag agagagagag cgccatctgt 540 gagcatttag aatcctctct atcctgagca aggagttctg aaggcacagg tgtgtgtgta 600 gagtgtggat ttgtctgtgt ctgtgaggct gttgtgggag gggaggcagg agggggctgc 660 ttcttattct tggaggcctc tgtggggagg tgacaaggga ggtgggtgct gggggctgga 720 gagagaggtg accttgattg tctcgggtcc ttagagatgc aaggaaggga aatgtaaggg 780 gtgtgtggtt ggggtgaagg tttaggggag gagagctgag gggtaaggaa ggtttgggat 840 aatgtgagga ggccggttcc agactgtccc tggcacacac ccttcatgta atctctgaaa 900 taaaagtgtg tgccgtttgt ttgtaaaagc attagattaa tttctagggg aattgaggag 960 acctctgagg catctctgaa gcttctttag gtctaaattt cttgctagtt ttttgttttt 1020 ttagtgtgta tatttttaca tagtagaaat gactgtgaaa ctaacttttt gaattaaagt 1080 tttaacacag ttactatttt attataatgc taatagtttt ctagtagtta catattattc 1140 ttttatatat aatagttgtg acacaactta cctcactttc ccctttgttg acctttatta 1200 tgacattcac caaaagttga aaatgtatgt ttctggttaa tttttaattt atattttttt 1260 catttataat tcttttgaat tattttgacc tatttattgg ccagttttaa taactgctgt 1320 aagaattccc tattgtattt ggtagggaat ggacaatgat ctactgccta atatctcgag 1380 ggcttagtat ttttctcagt gactttgtgg gttctttgta ctgtgagatt attaacactt 1440 tattgatatt tgattcagca tttgctccag tttgtggttt gtatgttgat tttgaaaatt 1500 cttttccatg ttaagaattt gaacattttt atataataaa atatgttgca aaatttttat 1560 taatgattta caatccatct taaatctgcc attttgtggt attgttgtct ccaggtttct 1620 ccttacttct aaaaaaaatt gcatttattg agagtctgct agtgttaggg attttcctgg 1680 gcataagcac cccaagtgac gagtcccaga cactgcctta atccaaatgt gattctggaa 1740 agaaaaatca ttttacaatg ataggcctaa taataattaa gcttgtgttg catgggagat 1800 gcattgatca gctaaatgta aatgtaagaa ctttcaaaac taaaatgacg ttccttaatc 1860 cttctctctg ctttatgact catgcttttc tgggaaagta aaaatttgga gaatcatttc 1920 tgtctgtccc accttcccag gggcagaacc atttctgtgg tgttctaagg tgtgagtgca 1980 tggcggtagt attcctaaaa attcatattt ggtttcgtca tgtacccaac tctgtcccgt 2040 tatctatcca cattgtttta aatcatatat ttctgtcaag gtgtacaagg atgataaata 2100 ggtgccaagt ggagcaccca agtgtgatga gccccctcac agtggaatgg agtgtgaagc 2160 tttatgacct cataaattga aggttatctt cagtcattct tttatatatt ttacatgcat 2220 taatcctcat ataatcccaa gaggtaaatt agtataatta tccttcatta taggtgacaa 2280 agttgagaca cagaagaatc aaactcttaa ggcagacctt ggatttgaac caggcaacct 2340 ggctcagata tcagttttaa ttactacact ctgtactttc aaagatttgt aaacactttg 2400 acaatgcatg acaatttcaa gctatgaaga aacaaacaca atttttcaca atatctctca 2460 aatctaatgg gtcctcacta tcaagattaa gttccaggct gatgacactg taaggccaca 2520 tggccagtgg tgctggaggc ctggtcaagg ccagagcctg ggtttgcaga gaagcagaca 2580 aacagccaaa caaggagact tactctgtct tcatgactca ttccctctac cttttttctc 2640 ctagtccatc ctaaggtgac tgtgtatcct tcaaagaccc agcccctgca gcaccacaac 2700 ctcctggtct gttctgtgag tggtttctat ccaggcagca ttgaagtcag gtggttccgg 2760 aatggccagg aagagaagac tggggtggtg tccacgggcc tgatccacaa tggagactgg 2820 accttccaga ccctggtgat gctggaaaca gttcctcgga gtggagaggt ttacacctgc 2880 caagtggagc acccaagcgt gacaagcctt ctcacagtgg aatggagtga gcagctttct 2940 gacttcataa atttctcacc caccaagaag gggactgtgc taatccctga gtgtcaggtt 3000 tctcctctcc cacgtcctat tttcatttgc tccatgttct catctccatc agcacaggtc 3060 actgggggta gccctgtagg tgtttctaga aacacctgta cctcctggag aagcagtctc 3120 gcctgccagg caggagaggc tgtccctctt ttgaacctcc ccatgatgtc acaggtcagg 3180 gtcacccacc ctccccaggc tccaggcact gcctctgggt ctgagactga gtttctggtg 3240 ctgttgatct gagttatttg ttgtgatctg ggaagaggag aagtgtaggg gccttcctga 3300 catgagggga gtccagctct gccttttatt agctctgtca ctctagacaa actacttagc 3360 ctcattgagt ctcaggcttt ctgtggatca gatgttgaac tcttgcctta catcaaggct 3420 gtaatatttg aatgagtttg atgtctgaac cttgtaactg ttcagtgtga tttgaaatcc 3480 tttttttctc cagaaatggc tagttatttt agttcttgtg gggtggactt cttccccatt 3540 ttcaaagctc tgaatcttag agtctcaatt aaagaggttc aatttggaat aagcatcact 3600 aaacctggct tcctctctca ggagc 3625 //