Dbfetch
ID ON062354; SV 1; linear; genomic DNA; STD; HUM; 6522 BP. XX AC ON062354; XX DT 09-MAY-2022 (Rel. 144, Created) DT 17-MAY-2022 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens isolate DQB06NEW_22N25 MHC class II antigen (HLA-DQB1) gene, DE HLA-DQB1*06 NEW allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-6522 RA Ferru-Clement R., Delobre O., Jollet I.; RT ; RL Submitted (02-MAR-2022) to the INSDC. RL HLA, EFS, 350 avenue Jacques Coeur, Poitiers 86000, France XX DR MD5; b1bf0466075b98c3c082b8e804d1fec3. XX CC ##Assembly-Data-START## CC Assembly Method :: Omixon HLA Twin v. V4.4.1 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..6522 FT /organism="Homo sapiens" FT /isolate="DQB06NEW_22N25" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <42..>6414 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*06 NEW" FT mRNA join(<42..150,1582..1851,4402..4683,5193..5303,6401..>6414) FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*06 NEW" FT /product="MHC class II antigen" FT CDS join(42..150,1582..1851,4402..4683,5193..5303,6401..6414) FT /codon_start=1 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*06 NEW" FT /product="MHC class II antigen" FT /protein_id="UPT51147.1" FT /translation="MSWKKALRIPGDLRVATVTLMLAMLSSLLAEGRDSPEDFVYQFKG FT MCYFTNGTERVRLVTRHIYNREEYARFDSDVGVYRAVTPQGRPDAEYWNSQKEVLEGTR FT AELDTVCRHNYEVAFRGILQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPGQIKVRW FT FRKDQEETAGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQSPITVEWRA FT QSESAQSKMLSGVGGFVLGLIFLGLGLIIRQRSQKGLLH" XX SQ Sequence 6522 BP; 1653 A; 1483 C; 1602 G; 1784 T; 0 other; gagctgtgtt gactaccact gcttttccct tcgtctcagt tatgtcttgg aagaaggctt 60 tgcggatccc cggagacctt cgggtagcaa ctgtcacctt gatgctggcg atgctgagct 120 ccctactggc tgagggcaga gactctcccg gtaagtgcag ggcagctgct ctccagagcc 180 gccactctgg gaacaggctc tccttgggct ggggtatggg ggatggtgat ctctatgatc 240 ttggacacaa tctttcatca acatttcctc tctcttggga aagaaagcta tgttgcattc 300 ccatttatct tttagtgatg agatgaggac aatccaatcc ccatcctaca ggcttaagcc 360 tggaagagga ggagagagga gagaaagagg agataaagtg tacatttact accagcgata 420 ggacaaagtg agcatggggt tatttttgaa gatatgaatt tctccaaaga cacagcagga 480 tttgtcattt aggcgtgccc caagactgcc tggacttagg attatgagat cctgcattgg 540 aaaatgtgag gcagcaatgg tgtctgtagt ctctgtattt gaggaaaatt tgtctctatt 600 cctgaccgag tggagcattt gtggaggcaa aatcttggtg ctgagggaag ctgactggct 660 gaccacagag agggagtctt cgggtttcac tgatttatgg gcaaatggtg acttgagtgg 720 gattcagaga cccgagttaa tggtggactg aatttagtag gaaggaggat gtaaagaagg 780 gaaataacac atattgtgaa accactcact tcagacagaa caatacttta tataacttct 840 ctctcactcc ttctaacatc ctgtgtgtag atatcatgat tttcttttac acaattatac 900 ttgtgatatg gatattctgt tacataacct gcccaaactg gtgactgcca cagtttaact 960 ggaatctagt ttatcaaatt caaaagcttg tgctctttcc atgaataaat gtctctatct 1020 aggactcaga ggtgtaggtc ctttccaaca tagaagggag tgaacctcaa cgggacttgg 1080 gaggttaaat ctaggcatgg gaaggaaggt attttaccca gggaccaaga gaatacgcgt 1140 gtcagaacga ggccaggctt aattcctgga cctatctcgt cattccgttg aactctcaga 1200 tttatgtgga taactttatc tctgaggtat ccaggagctt catgaaaaat gggatttcat 1260 gcgagaacgc cctgatccct ctaagtgcag aggtgcatgt aaaatcagcc cgactgcctc 1320 ttcgctgggt tcacaggctc aggcagggac agggctttcc tccctttcct ggatgtagga 1380 aggcagattc cagaagcccg caaagaaggc gggcagagct gggcagagcc gccgggagga 1440 tcccaggtct ggagcgccag gcacgggcgg gcgggaactg gaggtcgcgc gggcggttcc 1500 acagctccag gccgggtcag ggcggcggct gcgggggcgg ccgggctggg gcctgactga 1560 ccggccggtg attccccgca gaggatttcg tgtaccagtt taagggcatg tgctacttca 1620 ccaacgggac ggagcgcgtg cgtcttgtaa ccagacacat ctataaccga gaggagtacg 1680 cgcgcttcga cagcgacgtg ggggtgtacc gcgcggtgac gccgcagggg cggcctgatg 1740 ccgagtactg gaacagccag aaggaagtcc tggaggggac ccgggcggag ttggacacgg 1800 tgtgcagaca caactacgag gtggcgttcc gcgggatctt gcagaggaga ggtgagcgtc 1860 gtcgcccctc cgtgaggccc acccttggcc gagaccccga gtttctgtgc cgggaggggc 1920 gatgggggcg aggtctctga aatctgagcc cagttcattc caccccaggg gaaaggaggc 1980 ggcggcgggg tggtgggggc aggtgcatcg gaggggcggg gacctagggc agagcagggg 2040 gacaagcaga gttggccagg ctgcctagtg tcccccccag cctccccgtc cgtcggcctc 2100 gtcctccgct ctgcacgttt ctcgcctcgt gccttatgtg tttgcctcct cgtaccttac 2160 cttcgctaag cagttctctc tgcccccagt gcccaccctc ttcccctgcc cgccggcctc 2220 gctagcactg ccccacccag caaggcccac gtgcgcagct tgcgccgcag gaagcttcag 2280 gcttggcctg gtggagttag ggctgcccca cagctgcgcg cagggcatcc agcaattaca 2340 gttgcgaaat aagatatttt gactttttgg cttcaaatca ttattcatcg taattctgtt 2400 ttcttaaatg gctaccacta atggcggaga tctttgaggc gagagactgt ttaattattg 2460 catgcctggt acctgacaca ttgactggta tgtggtgtga gctcaatgat cttctgttaa 2520 attcatgaat aaatgtactc agctgccaat ccagttaggt tcaagaaaaa aacagaggct 2580 tacaaatgaa ctttatcaat tattttctaa cattttgctt aatgctttca agtaaactct 2640 tactgacttg gatcttaata gaatttgtga atacaaagtc tgaggaaaat gtgtttgcta 2700 aaaataaaaa caatgcttga atgatgttgt aaggcagagt tttaatttct tagaaaagct 2760 gaacaaatag cactatgcaa agatcagaag tttgggaata aataggttga agctattaaa 2820 ttattggata aaaatagttt caggttgctt ttggcctagg ttatcccctc ccccccatca 2880 ctatccactt caggaataaa cattctgaaa gtcaatttta cccattcagg aagcacttat 2940 ttctagacag ttgccttatc aaataccatc tatgttatgt catttaatct cacagctacc 3000 tgtgcattag agattagcat caccacttta tatatcctaa tattggtaca tgataaacac 3060 tttaagtaat cagcccacaa ttactcacca agatcttaag cctcccaaag tacacaacat 3120 tcttatgttc ctcactacac atatgtagag tctaagggat gtaaggcctt gttaaagcca 3180 gttttgacca gaagcagcaa tgagtctatt cctgtttgtt ctgtgtgtta atgcggcatt 3240 gaaaattcat gattaatcaa tccctagtct gaccccggtg ttatctatgc aggttcacaa 3300 aacttttagt ttgctttaca ctcccttgcc ttcttttgac tcacatccta atgccagcaa 3360 gtacttatat ttttgctatt tcagttttat ttccataaaa tttattttat catcttttct 3420 cataaatttg tgccctctat ttttactccc agtctgttga agatgaacaa atcttataag 3480 gccacatagc tgactctgat ttcagttggc ctccaggaag gagaacctaa agaaaagttc 3540 aagtccaagc agaaaccatg attccttccg gatgatggct caagagtgcc atttaattgg 3600 ggtgccacct gctgacctca gcaaatccca gttatatgta tatgttcaca ttacaggctc 3660 attagcccag gccgacctct gcacggatct cagaatattt tctgtggaga acatacacga 3720 taatgtctga tttcagaaca agaaagtaat tgtcaatagc aaggaaatgg agtagggtag 3780 acagctagta attaaactca cttgtgcgtt aaaaagaaat taaggaaaaa aagaaaatga 3840 gagaacatat tactaaataa agaaagcaca cattaaatat ttgctatagt ttcacactaa 3900 gagaataaag gaaatgtgat aaagtggcct aaaaggaaag gatgagatgt gtaaaagagg 3960 cggggaaaga tgtgtcattt ttttttacta tgagcagcaa tctgagaaga taaaggaatt 4020 gagttgtgga caaacatgat gtttgatcaa gggttatttg ttttgaaggc ctgcctactt 4080 ttttttcaaa tattacaaac ttttgaaata acattctact tttttttcaa atattacaaa 4140 cttttgaaat aacattcttt ttgttttttg ctgtctgtta ctagattgca cattctataa 4200 atgcagggac catagtatgt tatttatctt tgaattctca gtgattgtca aatttatatt 4260 tgttgaatga accttaatcc aagacttcga ctccaggtat ctttccactc tggtccaagg 4320 agggatcctt cctcatggta gacgtggtgt gtgttctcac atctcactcc tatgtctttt 4380 cctgtctgtt actgccctca gtggagccca cagtgaccat ctccccatcc aggacagagg 4440 ccctcaacca ccacaacctg ctggtctgct cggtgacaga tttctatcca ggccagatca 4500 aagtccggtg gtttcggaaa gatcaggagg agacagccgg cgttgtgtcc acccccctta 4560 ttaggaatgg tgactggact ttccagatcc tggtgatgct ggaaatgact ccccagcgtg 4620 gagatgtcta cacctgccac gtggagcacc ccagcctcca gagccccatc accgtggagt 4680 ggcgtaaggg gatattgagt ttctgttact atgggcccac aagacaaaga gctccttctg 4740 acccattcct tcccatctct tatccctgat gtcactactg agctgggaat cacaggagac 4800 tagagcacct cttgctccat ggcaagtgca tcagaagaat cctggtctca tcacctttcc 4860 agatgctagg gaaattactc tacatactgt tgctctgaat cccagtcctg atagctctga 4920 gggactgatt cttagggctg gtgactggga tcttagggtc taaggttatg gatgagttct 4980 tgaagagcag agatttgctt ccccactctc tcacctattc actgtatcca aggacctatt 5040 ggctggtctt tcccctcctt aggggtggtc tgaatggaga actaggttcc tttgatgcct 5100 tcaccttctg cacctcagac tggacttcaa ctcctcagca gggatgctat ggggtgtggg 5160 gacaaacaca gacactcagt tctgctcttt aggggctcag tctgaatctg cccagagcaa 5220 gatgctgagt ggcgttggag gcttcgtgct ggggctgatc ttccttgggc tgggccttat 5280 catccgtcaa aggagtcaga aaggtgagga accccagggg aaaaggggaa gatgggctgt 5340 gacccagacc ctctgttcag agtggtcctg tctgtagatt agctctttcc tcctgaccct 5400 gagaagaagt gcgaggagac aggacaagat gggaggaggc attggaatct gattttactg 5460 gttgaaaggt agcgctgtca cagagctgac tgatagagct tattccaggg catccttacc 5520 attcatcatt gtctcactgg ctcctttcca aaagcttcct ccattaagag ggtcagagcc 5580 tcagcttcct ttctttctag tgacaatttc ctttgtttta ggggatttta aattagggtg 5640 ctgaaggcct ggaagaacat gggtgggaag agaatgtaac tctaagtcat gtgtgtcatt 5700 ttcctttggg gtgagagagt ggctgtttgt gtaatgagac ctttctctgc ataacttcct 5760 tttgtaagac ctcaagggcc tccaccagca ggtaatattt cagccatgat ccagtgtggg 5820 gaggcacagg tataagaggg aagagcatga gctgagtgta cctgaccaca gtggtccatg 5880 ttcatggcct atttgctgct atgaggatca agacttaggg gagaagtttg ccagtttcta 5940 ggaatctcca gacattgttc cccagaacca agccttaact ttggtggcat cttcttgtga 6000 aatgtggagc cagaaccaca gcttaaatgt tagacactag gatgatgccc actttgtgcc 6060 acatgatggt ggctactgcc tgtaagcatt ttccagtgac tgaaagaggc tgctagtggt 6120 cgggaagaga tatcatccaa tttcctaaaa agactgaacc cttcatattc cccagaagaa 6180 taacagctgt tccccacctc ccacacatct gcatcaagct gaagttctgt gtcctcatga 6240 gctgatttca cctttgcaca gatcttgggg gaggtgatga caatacaccc tggacctcaa 6300 ctttctctgt ctgaagctgc agggggcccc tgaagggtgg gggagatggc aggcccacca 6360 ggataccctg tgctgatcaa tgctcttctc tcttctccag ggcttctgca ctgactcctg 6420 agactatttt aactaggatt ggttatcact cttctgtgat gcctgcttgt gcctgcccag 6480 aattcccagc tgcctgtgtc agcttgtccc cctgagatca aa 6522 //