Dbfetch
ID ON055437; SV 1; linear; genomic DNA; STD; HUM; 5394 BP. XX AC ON055437; XX DT 02-JUN-2022 (Rel. 144, Created) DT 09-JUN-2022 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens MHC class II antigen (HLA-DPA1) gene, HLA-DPA1*02var allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5394 RA Marin L.A.; RT ; RL Submitted (21-MAR-2022) to the INSDC. RL Inmunologia, Hospital Universitario de Albacete, Hermanos Falco, 37, RL Albacete, Albacete 02006, Spain XX DR MD5; a3e60a6536ae9e40c28b16efed614fea. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 2.24.0.25185 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..5394 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..5394 FT /gene="HLA-DPA1" FT /allele="HLA-DPA1*02var" FT mRNA join(<1..100,3657..3902,4243..4524,4739..5394) FT /gene="HLA-DPA1" FT /allele="HLA-DPA1*02var" FT /product="MHC class II antigen" FT CDS join(1..100,3657..3902,4243..4524,4739..4893) FT /codon_start=1 FT /gene="HLA-DPA1" FT /allele="HLA-DPA1*02var" FT /product="MHC class II antigen" FT /protein_id="URH08512.1" FT /translation="MRPEDRMFHIRAVILRALSLAFLLSLRGAGAIKADHVSTYAAFVQ FT THRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAILNNNLNTL FT IQRSNHTQAANDPPEVTVFPKEPVELGQPNTLICHIDRFFPPVLNVTWLCNGEPVTEGV FT AESLFLPRTDYSFHKFHYLTFVPSAEDVYDCRVEHWGLDQPLLKHWEAQEPIQMPETTE FT TVLCALGLVLGLVGIIVGTVLIIKSLRSGHDPRAQGPL" FT exon <1..100 FT /gene="HLA-DPA1" FT /allele="HLA-DPA1*02var" FT /number=1 FT intron 101..3656 FT /gene="HLA-DPA1" FT /allele="HLA-DPA1*02var" FT /number=1 FT exon 3657..3902 FT /gene="HLA-DPA1" FT /allele="HLA-DPA1*02var" FT /number=2 FT intron 3903..4242 FT /gene="HLA-DPA1" FT /allele="HLA-DPA1*02var" FT /number=2 FT exon 4243..4524 FT /gene="HLA-DPA1" FT /allele="HLA-DPA1*02var" FT /number=3 FT intron 4525..4738 FT /gene="HLA-DPA1" FT /allele="HLA-DPA1*02var" FT /number=3 FT exon 4739..5394 FT /gene="HLA-DPA1" FT /allele="HLA-DPA1*02var" FT /number=4 FT 3'UTR 4894..5394 FT /gene="HLA-DPA1" FT /allele="HLA-DPA1*02var" XX SQ Sequence 5394 BP; 1440 A; 1276 C; 1029 G; 1649 T; 0 other; atgcgccctg aagacagaat gttccatatc agagctgtga tcttgagagc cctctccttg 60 gctttcctgc tgagtctccg aggagctggg gccatcaagg gtgagtgctc aggaggacgc 120 aagagcgtcg gggtgagtga tggggtggtt cacatcaatt gttgcttcag gaatcacaga 180 ttttaggggc tcattgatct atctggtcct catagtctat gttccctctg gccctcataa 240 taataacagc aataacagcc agaatttatg agacgcctgc atagtttctt tccccattta 300 catctcacag gaaccttcaa tgaagataat attccattca tttagaaatt attcctttta 360 tttagaaatt attttgaaaa aactgaagct caaaaagatg aataagtttt ccaaggttac 420 acagcagatc aacgagccaa gtttgaagtc cagacccagc tctgagggtc gtacactgcc 480 ttccccagat tcctgcacac agtgacctac taccagggcc ctcctatctc tctgggatcc 540 ccagcctctg tcttttgtgg ctgcttcaca ggaactccga gctatggact ctgcattagg 600 agaggaagtg cgaagagtgt ttctgtatcc tctctctctt ctaggaccct agggcttttc 660 ctgggtcttt gtgggtggtc acaagctttc ctccctcaag acagcagggt tgcatggtct 720 tgatagcctt gtgattcggg ttctgagaga tccaggactg caagggaggc ctagactttt 780 gatagctgca aggactcagc cagagatgga ccgtagtgaa tgctcctttt tcctgtagct 840 gaaatcaggg agaatgacat caagcctgtt catgatgctg tcattccaaa atctagtgat 900 ggggaaggtt agaatccata acgtacaaga tgcacactgg cttcagacag ttttatttaa 960 gatgtgtaga ataaagagga ggtcaggctg ggtagaacca gaagtatcta ttgccctgtt 1020 cgcggtcacc tgagttattt ctaatgttat gttataataa acaccacaat aggcttctct 1080 tcatagatgc aaatactttt tagtattctt ggtagaaatt cctaatgagc tcagctgtct 1140 cttcagggct tccctgccca gtctcttaac atttaaacat gtcatttacc ttaaaaacat 1200 aagtgcaaac caactgataa aaaacaacct tgccttcagt ctgcatcctg tcccagagac 1260 actttctttg tgtcctcaca cgtggagcta agcttctgac ttgcctctgg tacatccctg 1320 aggatcctct catcttggcc atcaggaacc tctacagaag gtcaaatcca gtgggttctt 1380 ctcagtgcct ctgacttgag ttactaataa catttgcact gtaatccact tctttctgat 1440 gaactaccat gtccttattt ttctcctgtt tacctggatc ctccttatca tcctttaaat 1500 cacctcttaa ttatcatgtt ctctcattat accctgagat ctcggcaatt ctgatttttg 1560 gcactcttcc tggaaaatct catttaacct gcgcctgcca ctaatgactc tcagttctct 1620 ggcctaaact cctctcctga gaccacccat catacacaaa tgtctacgta ttatttctcc 1680 ttagatgact ttcagatctt ctaagtgcaa tagccccaca gtgaactcag tatcttctcc 1740 cagtcaggct gtcttccccc tgagagaagt ggcttttgcc ctgttttctg aatgcctaca 1800 ttgaagccat ctgttcccca ggaagccttc cctgatgtgc tgtttgatcg catcttgtgt 1860 atacccacgt atctgcactt atccttctga acctgctgtt gtcttgtcac ttgtgtttcc 1920 ttctgtgact tatacgcgtc tgcacaacag gacgtatgta ttatttttat ttgagtattt 1980 agcatctaac agtgtttgac atatagtagt cttttaatac atatttttgt ctgaatggaa 2040 atgatatttt gaagtaaaat aatctgttcc atagctggct gatctttgga ctgcagaact 2100 tgtgaaagtg ttttttaaaa agcattttaa aaagtacaag ggacattcat gtaataagaa 2160 gatgagtttt caataactgc tagaggactt tgtgtctttt tattttaccc tctttttcct 2220 gatgagtcct ttgagtcctt taaactgagg agcaagctaa gtttcctagt gaaataccta 2280 taggatttgt tttgtttagt ttcaaatacc actctttgct tggccactta ctgtgtcagg 2340 gagtcattct cagtgaaaaa taagacatag atcataccct ctagacactt acaattacag 2400 tgacaaggag tcattctcct gtccccacat gtcagggctg aaaactcaca gggaaatccg 2460 tgagttggga agtgagagca gaagagctcc atagttcctt ctcactctga tgcatttacc 2520 attctaaacc cagactttca catacacatt catcattttc tttcatgata atagttgctt 2580 ttatcctctt atctttgcta attcttacaa actaataaag actaagaaac aaaataaatt 2640 aaatcctaca ggtgttccaa actcagcaat aatttctagt tggcctctaa aacaaaaatc 2700 aaaatataaa tgtaagaaaa gttcagaatg cttagtacct gcgtgatgaa ataatctgta 2760 cactaaaccc ccgagtcatg agtttaccta tacaacaaac ctgcacatgt actcctgaac 2820 ataaaataaa tgttgaaata tttttaaaaa ggaaacaaaa gtttggaaca aatgccaaaa 2880 taactgtact gtacttttga atttatatgc tccaaatgaa aaatattatc aacaaagcta 2940 tacattctac attttcatgt tcataaacta agacagaaac tttaaaactg tcaagagcac 3000 taaaatttga aggatatttt cttcttcctc tcaattttgt atttttttct accttttcta 3060 taataagaaa aagaaaatgt ccactccccc aaccccacga ctctaaaaac aattttacat 3120 ctgtgttcta gaagaattaa gaacttaatg ggatagaaaa cctctctact agttccacca 3180 gtagccatat gaccttagca agtaattaat atgtaacttc cctgcatttc cttacctgta 3240 aaatgtatga tatgtatttg cttcataaag ttattgtgac aattcaatga gtgaatatgt 3300 aaagtattta gaaggatgcc tggcacaact aagtgctcaa caaatgttag ctgtcattgt 3360 tatttttact attgtgtagg gtcaggatgc ccagactttc aaagaccagg aagcagcttg 3420 acttatcaat gataaacttt ttattttgtt cttcactcct ttctttttat aactgctcat 3480 ctgctctgta ttatttcctt tatggtgttg ctccttcttc ttccccatat gtccttcctt 3540 tgacctctta ctttcttcct ttttatattc ataagtcttt attcattctc tagctttgac 3600 cacttgcata ttcaaactga cattttgtca tgtttttctc tactttcttt atgcagcgga 3660 ccatgtgtca acttatgccg cgtttgtaca gacccataga ccaacagggg agtttatgtt 3720 tgaatttgat gaagatgagc agttctatgt ggatctggat aaaaaggaga ccgtctggca 3780 tctggaggag tttggccgag ccttttcctt tgaggctcag ggcgggctgg ctaacattgc 3840 tatattgaac aacaacttga ataccttgat ccagcgttcc aaccacactc aggccgccaa 3900 tggtactgcc tatctttgcc tcttcctctg tagcccaact ggaagggatg agagggcctc 3960 tctgccaccc tcagactagg aagcctaagt gccccctgct gtgtgatcct cttccactag 4020 tggccgtggg ctgatcccac cacagcaagg gctttcatcc tctcttctca ggagagagaa 4080 aggtgagcag agtgaggctg gtcagtggtg tgatacccct ctctgtgatt cacagctgcc 4140 ataaaatcta aggctgaggt agaggaccac cctcccccaa gaggtggagc ctttgtgatt 4200 catcccagaa gagggaccta acctggtgct gtctcctcct agatccccct gaggtgaccg 4260 tgtttcccaa ggagcctgtg gagctgggcc agcccaacac cctcatctgc cacattgaca 4320 ggttcttccc accagtgctc aacgtcacat ggctgtgcaa tggggagcca gtcactgagg 4380 gtgtcgctga gagcctcttc ctgcccagaa cagattacag cttccacaag ttccattacc 4440 tgacctttgt gccctcagca gaggacgtct atgactgcag ggtggagcac tggggcttgg 4500 accagccgct cctcaagcac tggggtatgc aactgctttt ctctccataa tctcctggca 4560 tcctctattc caaagacctg gtgtcctctg caccagcttt ccccactggc caggtctcag 4620 tcctctcctc gtcctaacat ccaattaact ggtccataac cttcaattcc cacaaccatc 4680 ccaggccaga accaccctca ctacacctcc tgaccctatc tcttcattct tcccccagag 4740 gcccaagagc caatccagat gcctgagaca acggagactg tgctctgtgc cctgggcctg 4800 gtgctgggcc tagtgggcat catcgtgggc accgtcctca tcataaagtc tctgcgttct 4860 ggccatgacc cccgggccca ggggcccctg tgaaatactg taaaggtggg aatgtaaaaa 4920 aggaggtcct agaatttgta gaatgtaagg aagggaggaa aaattcaatc tgataagtgt 4980 tcattgatct tctaatgggt taaaagcact cagccacata acaacaacaa cattgataac 5040 taactgagta gttaatatgg tcaggcgcta ttctgagggt ttacattcat taactcactt 5100 tattctcaca aatagtcttt gaggtaggta ctattatttt caccatttca catgagagat 5160 acttacatct ttttacatac acagagatct taagcacttt gatccagttc ccacagctat 5220 gaagtagtag ggctaccttc caatccagaa agtctggatc caagactgtt tatccactgt 5280 cctattcacc ctattttgtg aaggaaaaga ccaagttgaa attctccaag agtccgttgt 5340 ctaataacgg agccagatct atatttctat acataattac aacacagtgt ggtg 5394 //