Dbfetch

ID   OM945809; SV 1; linear; genomic DNA; STD; HUM; 6601 BP.
XX
AC   OM945809;
XX
DT   05-MAY-2022 (Rel. 144, Created)
DT   07-MAY-2022 (Rel. 144, Last updated, Version 1)
XX
DE   Homo sapiens MHC class II antigen (HLA-DQB1) gene, HLA-DQB1*06NEW22S143
DE   allele, complete cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-6601
RA   Walencik A.;
RT   ;
RL   Submitted (06-MAR-2022) to the INSDC.
RL   Histocompatibility laboratory, Etablissement Francais du Sang Centre-Pays
RL   de la Loire - Nantes, 34, Bd Jean Monnet, Nantes 44000, France
XX
DR   MD5; 7b2748631f891235495ca9f762ea9cc3.
XX
CC   ##Assembly-Data-START##
CC   Assembly Method       :: Typestream Visual v. V1.0EFS
CC   Sequencing Technology :: Illumina
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..6601
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <128..>6499
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*06NEW22S143"
FT   mRNA            join(<128..236,1668..1937,4487..4768,5278..5388,
FT                   6486..>6499)
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*06NEW22S143"
FT                   /product="MHC class II antigen"
FT   CDS             join(128..236,1668..1937,4487..4768,5278..5388,6486..6499)
FT                   /codon_start=1
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*06NEW22S143"
FT                   /product="MHC class II antigen"
FT                   /protein_id="UPO80810.1"
FT                   /translation="MSWKKALRIPGDLRVATVTLMLAMLSSLLAEGRDSPEDFVYQFKG
FT                   MCYFTNGTERVRLVTRYIYNREEYARFDSDVGVYRAVTPQGRPSAEYWNSQKEVLERTR
FT                   AELDTVCRHNYEVGYRGILQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPGQIKVQW
FT                   FRNDQEETAGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQSPITVEWRA
FT                   QSESAQSKMLSGVGGFVLGLIFLGLGLIIRQRSQKGLLH"
XX
SQ   Sequence 6601 BP; 1667 A; 1507 C; 1619 G; 1808 T; 0 other;
     tccgagggac catccaatcc tgccactcac ggaaacatcc acaggttttt attctttctg        60
     ccaggtacat cagatccatc aggtccgagc tgtgttgact accactgctt ttcccttcgt       120
     ctcagttatg tcttggaaga aggctttgcg gatccccgga gaccttcggg tagcaactgt       180
     caccttgatg ctggcgatgc tgagctccct actggctgag ggcagagact ctcccggtaa       240
     gtgcagggca gctgctctcc agagccgcca ctctgggaac aggctctcct tgggctgggg       300
     tatgggggat ggtgatctct atgatcttgg acacaatctt tcatcaacat ttcctctctc       360
     ttgggaaaga aagctatgtt gcattcccat ttatctttta gtgatgagat gaggacaatc       420
     caatccccat cctacaggct taagcctgga agaggaggag agaggagaga aagaggagat       480
     aaagtgtaca tttactacca gcgataggac aaagtgagca tggggttatt tttgaagata       540
     tgaatttctc caaagacaca gcaggatttg tcatttaggc gtgccccaag actgcctgga       600
     cttaggatta tgagatcctg cattggaaaa tgtgaggcag caatggtgtc tgtagtttct       660
     gtatttgagg aaaatttgtc tctattcctg accgagtgga gcatttgtgg aggcaaaatc       720
     ttggtgctga gggaagctga ctggctgacc acagagaggg agtcttcggg tttcactgat       780
     ttatgggcaa atggtgactt gagtgggatt cagagacccg agttaatggt ggactgaatt       840
     tagtaggaag gaggatgtaa agaagggaaa taacacatat tgtgaaacca ctcacttcag       900
     acagaacaat actttatata acttctctct cactccttct aacatcctgt gtgtagatat       960
     catgattttc ttttacacaa ttatacttgt gatatggata ttctgttaca taacctgccc      1020
     aaactggtga ctgccacagt ttaattggaa tctagtttat caaattcaaa agcttgtgct      1080
     ctttccatga ataaatgtct ctatctagga ctcagaggtg taggtccttt ccaacataga      1140
     agggagtgaa cctcaacggg acttgggagg gtaaatctag gcatgggaag gaaggtattt      1200
     tacccaggga ccaagagaat acgcgtgtca gaacgaggcc aggcttaatt cctggaccta      1260
     tctcgtcatt ccgttgaact ctcagattta tgtggataac tttatctctg aggtatccag      1320
     gagcttcatg aaaaatggga tttcatgcga gaacgccctg atccctctaa gtgcagaggt      1380
     gcatgtaaaa tcagcccgac tgcctcttcg ctgggttcac aggctcaggc agggacaggg      1440
     ctttcctccc tttcctggat gtaggaaggc agattccaga agcccgcaaa gaaggcgggc      1500
     agagctgggc agagccgccg ggaggatccc aggtctggag cgccaggcac gggcgggcgg      1560
     gaactggagg tcgcgcgggc ggttccacag ctccaggccg ggtcagggcg gcggctgcgg      1620
     gggcggccgg gctggggcct gactgaccgg ccggtgattc cccgcagagg atttcgtgta      1680
     ccagtttaag ggcatgtgct acttcaccaa cgggacggag cgcgtgcgtc ttgtaaccag      1740
     atacatctat aaccgagagg agtacgcgcg cttcgacagc gacgtggggg tgtaccgggc      1800
     ggtgacgccg caggggcggc ctagcgccga gtactggaac agccagaagg aagtcctgga      1860
     gaggacccgg gcggagttgg acacggtgtg cagacacaac tacgaggtgg ggtaccgcgg      1920
     gatcctgcag aggagaggtg agcgtcgtcg cccctccgtg aggcgcaccc ttggccggga      1980
     ccccgagtct ctgtgccggg aggggcgatg ggggcgaggt ctctgaaatc tgagcccagt      2040
     tcattccacc ccaggggaaa ggaggcggcg gcggggtggt gggggcaggt gcatcggagg      2100
     ggcggggacc tagggcagag cagggggaca agcagagttg gccaggctgc ctagtgtccc      2160
     ccccagcctc cccgtccgtc ggcctcgtcc tctgctctgc acgtttctcg cctcgtgcct      2220
     tatgcgtttg cctcctcgtg ccttaccttc gctaagcagt tctctctgcc cccagtgccc      2280
     accctcttcc cctgcccgcc ggcctcgcta gcactgcccc acccagcaag gcccacgtgc      2340
     gcagcttgcg ccgcaggaag cttcaggctt ggcctggtgg agttagggct gccccacaac      2400
     tgcgcgcagg gcatccagca attacagttg caaaataaga tattttgact ttttggcttc      2460
     aaatcattat tcatcgtaat tctgttttct taaatggcta ccactaatgg cggagatctt      2520
     tgaggcgaga gactgtttaa ttattgcatg cctggtacct gacacattga ctggtatgtg      2580
     gtgtgagctc aatgatcttc tgttaaattc atgaataaat gtactcagct gccaatccag      2640
     ttaggttcaa gaaaaaaaca gaggcttaca aatgaacttt atcaattatt ttctatcatt      2700
     ttgcttaatg ctttcaagta aactcttact gacttggatc ttaatagaat ttgtgaatac      2760
     aaagtctgag gaaaatgtgt ttgctaaaaa taaaaacaat gcttgaatga tgttgtaagg      2820
     cagagtttta atttcttaga aaagctgaac aaatagcact atgcaaagat cagaagtttg      2880
     ggaataaata ggttgaagct attaaattat tggataaaaa tagtttcagg ttgcttttgg      2940
     cctaggttat cccctcctcc catcactatc cacttcagga ataaacattc tgaaagtcaa      3000
     ttttacccat tcaggaagca cttatttcta gacagttgcc ttatcaaata ccatctatat      3060
     tatgtcattt aatctcgcag ctacctgtgc attagagatt agcatcacca ctttatatat      3120
     cctaatattg gtacatgata aacactttaa gtaatcagcc cacaattact caccaagatc      3180
     ttaagcctcc caaagtacac aacattctta tgttcctcac tacacatctg tagagtctaa      3240
     gggatgtaag gccttgttaa agccagtttt gaccagaagc agcaatgagt ctattcctgt      3300
     ttgttctcca tgttaatgcg gcattgaaaa ttcatgatta atcaatccct agtctgaccc      3360
     cagtgttatc tatgcaggtt cacaaaactt ttagtttgct ttacactccc ttgccttctt      3420
     ttgactcaca tcctaatgcc agcaagtact tatatttttg ctatttcagt tttatttcca      3480
     tgaaatttat tttatcatct tttctcataa atttgtgccc tctattttta ctcccagtct      3540
     gttgaagatg aacaaatctt ataaggccac atagctgact ctgatttcag ttggcctcca      3600
     ggaaggagaa cctaaagaaa agttcaagtc caagcagaaa ccatgattcc ttccggatga      3660
     tggctcaaga gtgccattta attggggtgc cacctgctga cctcagcaaa tcccagttat      3720
     atgtatatgt tcacattaca ggctcattag cccaggccga cctctgcacg gatctcagaa      3780
     tattttctgt ggagaacata cacgataatg tctgatttca gaacaagaaa gtaattgtca      3840
     atagcaagga aatggagtag ggtagacagc tagtaattaa actcacttgt gcgttaaaaa      3900
     gaaattaagg aaaaaaagaa aatgagagaa catattacta aataaagaaa gcacacatta      3960
     aatatttgct atagtttcac actaagagaa taaaggaaat gtgataaagt ggcctaaaag      4020
     gtaaaggatg agatgtgtaa aagaggcggg gaaagatgtg tcattttttt tactatgagc      4080
     agcaatctga gaagataaag gaattgagtt gtggacaaac atgatgtttg atcaagggtt      4140
     atttgttttg aaggcctgcc tacttttttt tcaaatatta caaacttttg aaataacatt      4200
     ctactttttt ttcaaatatt acaaactttt gaaataacat tctttttgtt ttttgctgtc      4260
     tgttactaga ttgcacattc tataaatgca gggaccatgg tatgttattt atctttgaat      4320
     tctcagtgat tgtcaaattt atatttgttg aatgaacctt aatccaagac ttggactcca      4380
     ggtatctttc cactctggtc caaggaggga tccttcctca tggtagacgt ggtgtgtgtt      4440
     ctcacatctc actcctatgt cttttcctgt ctgttactgc cctcagtgga gcccacagtg      4500
     accatctccc catccaggac agaggccctc aaccaccaca acctgctggt ctgctcggtg      4560
     acagatttct atccaggcca gatcaaagtc cagtggtttc ggaatgatca ggaggagaca      4620
     gccggcgttg tgtccacccc ccttattagg aatggtgact ggactttcca gatcctggtg      4680
     atgctggaaa tgactcccca gcgtggagat gtctacacct gccacgtgga gcaccccagc      4740
     ctccagagcc ccatcaccgt ggagtggcgt aaggggatat tgagtttctg ttactatggg      4800
     cccacaagac aaagagctcc ttctgaccca ttccttccca tctcttatcc ctgatgtcac      4860
     tactgagctg ggaatcacag gagactagag cacctcttgc tccatggcaa gtgcatcaga      4920
     agaatcctgg tctcatcacc tttccagatg ctagggaaat tactctgcat actgttgctc      4980
     tgaatcccag tcctgatagc tctgagggac tgattcttag ggctggtgac tgggatctta      5040
     gggtctaagg ttatggatga gttcttgaag agcagagatt tgcttcccca ctctctcacc      5100
     tattcactgt atccaaggac ctattggctg gtctttcccc tccttagggg tggtctgaat      5160
     ggagaactag tttcctttga tgccttcacc ttctgcacct cagactggac ttcaactcct      5220
     cagcagggat gctatggggt gtggggacaa acacagacac tcagttctgc tctttagggg      5280
     ctcagtctga atctgcccag agcaagatgc tgagtggcgt tggaggcttc gtgctggggc      5340
     tgatcttcct tgggctgggc cttatcatcc gtcaaaggag tcagaaaggt gaggaacccc      5400
     aggggaaaag gggaagatgg gctgtgaccc agaccctctg ttcagagtgg tcctgtctgt      5460
     agattagctc tttcctcctc accctgagag gaagtgcgag gagacaggac aagatgggag      5520
     gaggcattgg aatctgattt tactggttga aaggtagcgc tgtcacagag ctgactgata      5580
     gagcttattc cagggcatcc ttaccattca tcattgtctc actggctcct ttccaaaagc      5640
     ttcctccatt aagagggtca gagcctcaac ttcctttctt tctagtgaca atttcctttg      5700
     ttttagggga ttttaaatta gggtgctgaa ggcctggaag aacatgggtg ggaagagaat      5760
     gtaactctaa gtcatgtgtg tcattttcct ttggggtgag agagtggctg tttgtgtaat      5820
     gagacctttc tctgcataac ttccttttgt aagacctcaa gggcctccac cagcaggtaa      5880
     tatttcagcc atgatccagt gtgggtaggc acaggtataa gagggaagag catgagctga      5940
     gtgtacctga ccacagtggt ccatgttcat ggcctatttg ctgctatgag gatcaagact      6000
     taggggagaa gtttgccagt ttctaggaat ctccagacat tgttccccag aaccaagcct      6060
     taactttggt ggcatcttct tgtgaaatgt ggagccagaa ccacagctta aatgttagac      6120
     actaggatga tgcccacttt gtgccacatg atggtggcta ctgcctgtag gcattttcca      6180
     gtgactgaaa gaggctgcta gtggtcggga agagatatca tccaatttcc taaaaagact      6240
     gaacccttca tattccccag aagaataaca gctgttcccc acctccctca catctgcatc      6300
     aagctgaagt tctgtgtcct catgagctga tttcaccttt gcacagatct tgggggaggt      6360
     gatgacaata caccctggac ctcaactttc tctgtctgaa gctgcagggg gccgctgaag      6420
     ggtgggggag atggcaggcc caccaggata ccctgtgctg atcaatgctc ttctctcttc      6480
     tccagggctt ctgcactgac tcctgagact attttaacta ggattggtta tcactcttct      6540
     gtgatgcctg cttgtgcctg cccagaattc ccagctgcct gtgtcagctt gtccccctga      6600
     g                                                                      6601
//