Dbfetch
ID OM945809; SV 1; linear; genomic DNA; STD; HUM; 6601 BP.
XX
AC OM945809;
XX
DT 05-MAY-2022 (Rel. 144, Created)
DT 07-MAY-2022 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens MHC class II antigen (HLA-DQB1) gene, HLA-DQB1*06NEW22S143
DE allele, complete cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-6601
RA Walencik A.;
RT ;
RL Submitted (06-MAR-2022) to the INSDC.
RL Histocompatibility laboratory, Etablissement Francais du Sang Centre-Pays
RL de la Loire - Nantes, 34, Bd Jean Monnet, Nantes 44000, France
XX
DR MD5; 7b2748631f891235495ca9f762ea9cc3.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: Typestream Visual v. V1.0EFS
CC Sequencing Technology :: Illumina
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..6601
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <128..>6499
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*06NEW22S143"
FT mRNA join(<128..236,1668..1937,4487..4768,5278..5388,
FT 6486..>6499)
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*06NEW22S143"
FT /product="MHC class II antigen"
FT CDS join(128..236,1668..1937,4487..4768,5278..5388,6486..6499)
FT /codon_start=1
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*06NEW22S143"
FT /product="MHC class II antigen"
FT /protein_id="UPO80810.1"
FT /translation="MSWKKALRIPGDLRVATVTLMLAMLSSLLAEGRDSPEDFVYQFKG
FT MCYFTNGTERVRLVTRYIYNREEYARFDSDVGVYRAVTPQGRPSAEYWNSQKEVLERTR
FT AELDTVCRHNYEVGYRGILQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPGQIKVQW
FT FRNDQEETAGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQSPITVEWRA
FT QSESAQSKMLSGVGGFVLGLIFLGLGLIIRQRSQKGLLH"
XX
SQ Sequence 6601 BP; 1667 A; 1507 C; 1619 G; 1808 T; 0 other;
tccgagggac catccaatcc tgccactcac ggaaacatcc acaggttttt attctttctg 60
ccaggtacat cagatccatc aggtccgagc tgtgttgact accactgctt ttcccttcgt 120
ctcagttatg tcttggaaga aggctttgcg gatccccgga gaccttcggg tagcaactgt 180
caccttgatg ctggcgatgc tgagctccct actggctgag ggcagagact ctcccggtaa 240
gtgcagggca gctgctctcc agagccgcca ctctgggaac aggctctcct tgggctgggg 300
tatgggggat ggtgatctct atgatcttgg acacaatctt tcatcaacat ttcctctctc 360
ttgggaaaga aagctatgtt gcattcccat ttatctttta gtgatgagat gaggacaatc 420
caatccccat cctacaggct taagcctgga agaggaggag agaggagaga aagaggagat 480
aaagtgtaca tttactacca gcgataggac aaagtgagca tggggttatt tttgaagata 540
tgaatttctc caaagacaca gcaggatttg tcatttaggc gtgccccaag actgcctgga 600
cttaggatta tgagatcctg cattggaaaa tgtgaggcag caatggtgtc tgtagtttct 660
gtatttgagg aaaatttgtc tctattcctg accgagtgga gcatttgtgg aggcaaaatc 720
ttggtgctga gggaagctga ctggctgacc acagagaggg agtcttcggg tttcactgat 780
ttatgggcaa atggtgactt gagtgggatt cagagacccg agttaatggt ggactgaatt 840
tagtaggaag gaggatgtaa agaagggaaa taacacatat tgtgaaacca ctcacttcag 900
acagaacaat actttatata acttctctct cactccttct aacatcctgt gtgtagatat 960
catgattttc ttttacacaa ttatacttgt gatatggata ttctgttaca taacctgccc 1020
aaactggtga ctgccacagt ttaattggaa tctagtttat caaattcaaa agcttgtgct 1080
ctttccatga ataaatgtct ctatctagga ctcagaggtg taggtccttt ccaacataga 1140
agggagtgaa cctcaacggg acttgggagg gtaaatctag gcatgggaag gaaggtattt 1200
tacccaggga ccaagagaat acgcgtgtca gaacgaggcc aggcttaatt cctggaccta 1260
tctcgtcatt ccgttgaact ctcagattta tgtggataac tttatctctg aggtatccag 1320
gagcttcatg aaaaatggga tttcatgcga gaacgccctg atccctctaa gtgcagaggt 1380
gcatgtaaaa tcagcccgac tgcctcttcg ctgggttcac aggctcaggc agggacaggg 1440
ctttcctccc tttcctggat gtaggaaggc agattccaga agcccgcaaa gaaggcgggc 1500
agagctgggc agagccgccg ggaggatccc aggtctggag cgccaggcac gggcgggcgg 1560
gaactggagg tcgcgcgggc ggttccacag ctccaggccg ggtcagggcg gcggctgcgg 1620
gggcggccgg gctggggcct gactgaccgg ccggtgattc cccgcagagg atttcgtgta 1680
ccagtttaag ggcatgtgct acttcaccaa cgggacggag cgcgtgcgtc ttgtaaccag 1740
atacatctat aaccgagagg agtacgcgcg cttcgacagc gacgtggggg tgtaccgggc 1800
ggtgacgccg caggggcggc ctagcgccga gtactggaac agccagaagg aagtcctgga 1860
gaggacccgg gcggagttgg acacggtgtg cagacacaac tacgaggtgg ggtaccgcgg 1920
gatcctgcag aggagaggtg agcgtcgtcg cccctccgtg aggcgcaccc ttggccggga 1980
ccccgagtct ctgtgccggg aggggcgatg ggggcgaggt ctctgaaatc tgagcccagt 2040
tcattccacc ccaggggaaa ggaggcggcg gcggggtggt gggggcaggt gcatcggagg 2100
ggcggggacc tagggcagag cagggggaca agcagagttg gccaggctgc ctagtgtccc 2160
ccccagcctc cccgtccgtc ggcctcgtcc tctgctctgc acgtttctcg cctcgtgcct 2220
tatgcgtttg cctcctcgtg ccttaccttc gctaagcagt tctctctgcc cccagtgccc 2280
accctcttcc cctgcccgcc ggcctcgcta gcactgcccc acccagcaag gcccacgtgc 2340
gcagcttgcg ccgcaggaag cttcaggctt ggcctggtgg agttagggct gccccacaac 2400
tgcgcgcagg gcatccagca attacagttg caaaataaga tattttgact ttttggcttc 2460
aaatcattat tcatcgtaat tctgttttct taaatggcta ccactaatgg cggagatctt 2520
tgaggcgaga gactgtttaa ttattgcatg cctggtacct gacacattga ctggtatgtg 2580
gtgtgagctc aatgatcttc tgttaaattc atgaataaat gtactcagct gccaatccag 2640
ttaggttcaa gaaaaaaaca gaggcttaca aatgaacttt atcaattatt ttctatcatt 2700
ttgcttaatg ctttcaagta aactcttact gacttggatc ttaatagaat ttgtgaatac 2760
aaagtctgag gaaaatgtgt ttgctaaaaa taaaaacaat gcttgaatga tgttgtaagg 2820
cagagtttta atttcttaga aaagctgaac aaatagcact atgcaaagat cagaagtttg 2880
ggaataaata ggttgaagct attaaattat tggataaaaa tagtttcagg ttgcttttgg 2940
cctaggttat cccctcctcc catcactatc cacttcagga ataaacattc tgaaagtcaa 3000
ttttacccat tcaggaagca cttatttcta gacagttgcc ttatcaaata ccatctatat 3060
tatgtcattt aatctcgcag ctacctgtgc attagagatt agcatcacca ctttatatat 3120
cctaatattg gtacatgata aacactttaa gtaatcagcc cacaattact caccaagatc 3180
ttaagcctcc caaagtacac aacattctta tgttcctcac tacacatctg tagagtctaa 3240
gggatgtaag gccttgttaa agccagtttt gaccagaagc agcaatgagt ctattcctgt 3300
ttgttctcca tgttaatgcg gcattgaaaa ttcatgatta atcaatccct agtctgaccc 3360
cagtgttatc tatgcaggtt cacaaaactt ttagtttgct ttacactccc ttgccttctt 3420
ttgactcaca tcctaatgcc agcaagtact tatatttttg ctatttcagt tttatttcca 3480
tgaaatttat tttatcatct tttctcataa atttgtgccc tctattttta ctcccagtct 3540
gttgaagatg aacaaatctt ataaggccac atagctgact ctgatttcag ttggcctcca 3600
ggaaggagaa cctaaagaaa agttcaagtc caagcagaaa ccatgattcc ttccggatga 3660
tggctcaaga gtgccattta attggggtgc cacctgctga cctcagcaaa tcccagttat 3720
atgtatatgt tcacattaca ggctcattag cccaggccga cctctgcacg gatctcagaa 3780
tattttctgt ggagaacata cacgataatg tctgatttca gaacaagaaa gtaattgtca 3840
atagcaagga aatggagtag ggtagacagc tagtaattaa actcacttgt gcgttaaaaa 3900
gaaattaagg aaaaaaagaa aatgagagaa catattacta aataaagaaa gcacacatta 3960
aatatttgct atagtttcac actaagagaa taaaggaaat gtgataaagt ggcctaaaag 4020
gtaaaggatg agatgtgtaa aagaggcggg gaaagatgtg tcattttttt tactatgagc 4080
agcaatctga gaagataaag gaattgagtt gtggacaaac atgatgtttg atcaagggtt 4140
atttgttttg aaggcctgcc tacttttttt tcaaatatta caaacttttg aaataacatt 4200
ctactttttt ttcaaatatt acaaactttt gaaataacat tctttttgtt ttttgctgtc 4260
tgttactaga ttgcacattc tataaatgca gggaccatgg tatgttattt atctttgaat 4320
tctcagtgat tgtcaaattt atatttgttg aatgaacctt aatccaagac ttggactcca 4380
ggtatctttc cactctggtc caaggaggga tccttcctca tggtagacgt ggtgtgtgtt 4440
ctcacatctc actcctatgt cttttcctgt ctgttactgc cctcagtgga gcccacagtg 4500
accatctccc catccaggac agaggccctc aaccaccaca acctgctggt ctgctcggtg 4560
acagatttct atccaggcca gatcaaagtc cagtggtttc ggaatgatca ggaggagaca 4620
gccggcgttg tgtccacccc ccttattagg aatggtgact ggactttcca gatcctggtg 4680
atgctggaaa tgactcccca gcgtggagat gtctacacct gccacgtgga gcaccccagc 4740
ctccagagcc ccatcaccgt ggagtggcgt aaggggatat tgagtttctg ttactatggg 4800
cccacaagac aaagagctcc ttctgaccca ttccttccca tctcttatcc ctgatgtcac 4860
tactgagctg ggaatcacag gagactagag cacctcttgc tccatggcaa gtgcatcaga 4920
agaatcctgg tctcatcacc tttccagatg ctagggaaat tactctgcat actgttgctc 4980
tgaatcccag tcctgatagc tctgagggac tgattcttag ggctggtgac tgggatctta 5040
gggtctaagg ttatggatga gttcttgaag agcagagatt tgcttcccca ctctctcacc 5100
tattcactgt atccaaggac ctattggctg gtctttcccc tccttagggg tggtctgaat 5160
ggagaactag tttcctttga tgccttcacc ttctgcacct cagactggac ttcaactcct 5220
cagcagggat gctatggggt gtggggacaa acacagacac tcagttctgc tctttagggg 5280
ctcagtctga atctgcccag agcaagatgc tgagtggcgt tggaggcttc gtgctggggc 5340
tgatcttcct tgggctgggc cttatcatcc gtcaaaggag tcagaaaggt gaggaacccc 5400
aggggaaaag gggaagatgg gctgtgaccc agaccctctg ttcagagtgg tcctgtctgt 5460
agattagctc tttcctcctc accctgagag gaagtgcgag gagacaggac aagatgggag 5520
gaggcattgg aatctgattt tactggttga aaggtagcgc tgtcacagag ctgactgata 5580
gagcttattc cagggcatcc ttaccattca tcattgtctc actggctcct ttccaaaagc 5640
ttcctccatt aagagggtca gagcctcaac ttcctttctt tctagtgaca atttcctttg 5700
ttttagggga ttttaaatta gggtgctgaa ggcctggaag aacatgggtg ggaagagaat 5760
gtaactctaa gtcatgtgtg tcattttcct ttggggtgag agagtggctg tttgtgtaat 5820
gagacctttc tctgcataac ttccttttgt aagacctcaa gggcctccac cagcaggtaa 5880
tatttcagcc atgatccagt gtgggtaggc acaggtataa gagggaagag catgagctga 5940
gtgtacctga ccacagtggt ccatgttcat ggcctatttg ctgctatgag gatcaagact 6000
taggggagaa gtttgccagt ttctaggaat ctccagacat tgttccccag aaccaagcct 6060
taactttggt ggcatcttct tgtgaaatgt ggagccagaa ccacagctta aatgttagac 6120
actaggatga tgcccacttt gtgccacatg atggtggcta ctgcctgtag gcattttcca 6180
gtgactgaaa gaggctgcta gtggtcggga agagatatca tccaatttcc taaaaagact 6240
gaacccttca tattccccag aagaataaca gctgttcccc acctccctca catctgcatc 6300
aagctgaagt tctgtgtcct catgagctga tttcaccttt gcacagatct tgggggaggt 6360
gatgacaata caccctggac ctcaactttc tctgtctgaa gctgcagggg gccgctgaag 6420
ggtgggggag atggcaggcc caccaggata ccctgtgctg atcaatgctc ttctctcttc 6480
tccagggctt ctgcactgac tcctgagact attttaacta ggattggtta tcactcttct 6540
gtgatgcctg cttgtgcctg cccagaattc ccagctgcct gtgtcagctt gtccccctga 6600
g 6601
//