Dbfetch
ID OK332068; SV 1; linear; genomic DNA; STD; HUM; 2731 BP. XX AC OK332068; XX DT 01-APR-2022 (Rel. 144, Created) DT 11-APR-2022 (Rel. 144, Last updated, Version 2) XX DE Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*15:67extended allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2731 RA Mosbruger T.L., Dinou A., Ferriola D., Duke J.L., Pagkrati I., Damianos G., RA Kotsopoulou I., Tairis N., Tishkoff S., Monos D.S.; RT ; RL Submitted (16-SEP-2021) to the INSDC. RL Pathology, The Children's Hospital of Philadelphia, 3615 Civic Center Blvd. RL Rm 707A, Philadelphia, PA 19104, USA XX DR MD5; b093ee511e2b1b5062d2a06bd060efbe. XX CC ##Assembly-Data-START## CC Assembly Method :: Twin v. 3.1.3; GenDx v. 2.13 CC Assembly Name :: Novel HLA alleles CC Coverage :: 5'UTR to 3'UTR CC Sequencing Technology :: Illumina; Oxford Nanopore CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2731 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene 1..2731 FT /gene="HLA-B" FT /allele="HLA-B*15:67extended" FT mRNA join(1..108,237..506,757..1032,1608..1883,1988..2104, FT 2546..2578,2685..2731) FT /gene="HLA-B" FT /allele="HLA-B*15:67extended" FT /product="MHC class I antigen" FT exon 1..108 FT /gene="HLA-B" FT /allele="HLA-B*15:67extended" FT /number=1 FT 5'UTR 1..35 FT /gene="HLA-B" FT /allele="HLA-B*15:67extended" FT CDS join(36..108,237..506,757..1032,1608..1883,1988..2104, FT 2546..2578,2685..2728) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*15:67extended" FT /product="MHC class I antigen" FT /protein_id="UED36967.1" FT /translation="MRVTAPRTVLLLLSGALALTETWAGSHFMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDRETRNMKASAQTYRENLRI FT ALRYYNQSEAGSHTWQRMYGCDLGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTA FT AQITQHKWEAAREAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT intron 109..236 FT /gene="HLA-B" FT /allele="HLA-B*15:67extended" FT /number=1 FT exon 237..506 FT /gene="HLA-B" FT /allele="HLA-B*15:67extended" FT /number=2 FT intron 507..756 FT /gene="HLA-B" FT /allele="HLA-B*15:67extended" FT /number=2 FT exon 757..1032 FT /gene="HLA-B" FT /allele="HLA-B*15:67extended" FT /number=3 FT intron 1033..1607 FT /gene="HLA-B" FT /allele="HLA-B*15:67extended" FT /number=3 FT exon 1608..1883 FT /gene="HLA-B" FT /allele="HLA-B*15:67extended" FT /number=4 FT intron 1884..1987 FT /gene="HLA-B" FT /allele="HLA-B*15:67extended" FT /number=4 FT exon 1988..2104 FT /gene="HLA-B" FT /allele="HLA-B*15:67extended" FT /number=5 FT intron 2105..2545 FT /gene="HLA-B" FT /allele="HLA-B*15:67extended" FT /number=5 FT exon 2546..2578 FT /gene="HLA-B" FT /allele="HLA-B*15:67extended" FT /number=6 FT intron 2579..2684 FT /gene="HLA-B" FT /allele="HLA-B*15:67extended" FT /number=6 FT exon 2685..2731 FT /gene="HLA-B" FT /allele="HLA-B*15:67extended" FT /number=7 FT 3'UTR 2729..2731 FT /gene="HLA-B" FT /allele="HLA-B*15:67extended" XX SQ Sequence 2731 BP; 507 A; 815 C; 870 G; 539 T; 0 other; acccacccgg actcagaatc tcctcagacg ccgagatgcg ggtcacggcg ccccgaaccg 60 tcctcctgct gctctcggga gccctggccc tgaccgagac ctgggccggt gagtgcgggt 120 cgggagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg gcgcaggacc 180 cggggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc ccccaggctc 240 ccacttcatg aggtatttct acaccgccat gtcccggccc ggccgcgggg agccccgctt 300 catcgcagtg ggctacgtgg acgacacgca gttcgtgagg ttcgacagcg acgccgcgag 360 tccgaggatg gcgccccggg cgccatggat agagcaggag gggccggagt attgggaccg 420 ggagacacgg aacatgaagg cctccgcgca gacttaccga gagaacctgc ggatcgcgct 480 ccgctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc aggtcacgac 540 tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag atccgccccc 600 ctgaggccgc gggacccgcc caaaccctcg accggcgaga gccccaggcg cgtttacccg 660 gtttcatttt cagttgaggc caaaatcccc gcgggttggt cggggcgggg cggggcgggg 720 ctcgggggac ggggctgacc gcggggcctg ggccagggtc tcacacttgg cagaggatgt 780 atggctgcga cctggggccg gacgggcgcc tcctccgcgg gcatgaccag tccgcctacg 840 acggcaagga ttacatcgcc ctgaacgagg acctgagctc ctggaccgcg gcggacacgg 900 cggctcagat cacccagcac aagtgggagg cggcccgtga ggcggagcag ctgagagcct 960 acctggaggg cctgtgcgtg gagtggctcc gcagatacct ggagaacggg aaggagacgc 1020 tgcagcgcgc gggtaccagg ggcagtgggg agccttcccc atctcctata ggtcgccggg 1080 gatggcctcc cacgagaaga ggaggaaaat gggatcagcg ctagaatgtc gccctccctt 1140 gaatggagaa tggcatgagt tttcctgagt ttcctctgag ggccccctct tctctctagg 1200 acaattaagg gatgacgtct ctgaggaaat ggaggggaag acagtcccta ggatagtgat 1260 caggggtccc ctttgacccc tgcagcagcc ttgggaaccg tgacttttcc tctcaggcct 1320 tgttctctgc ctcacactca gtgtgtttgg ggctctgatt ccagcacttc tgagtcactt 1380 tacctccact cagatcagga gcagaagtcc ctgttccccg ctcagagact cgaactttcc 1440 aatgaatagg agattatccc aggtgcctgc gtccaggctg gtgtctgggt tctgtgcccc 1500 ttccccaccc caggtgtcct gtccattctc aggctggtca catgggtggt cctagggtgt 1560 cccatgagag atgcaaagcg cctgaatttt ctgactcttc ccatcagacc ccccaaagac 1620 acatgtgacc caccacccca tctctgacca tgaggccacc ctgaggtgct gggccctggg 1680 cttctaccct gcggagatca cactgacctg gcagcgggat ggcgaggacc aaactcagga 1740 caccgagctt gtggagacca gaccagcagg agatagaacc ttccagaagt gggcagctgt 1800 ggtggtgcct tctggagaag agcagagata cacatgccat gtacagcatg aggggctgcc 1860 gaagcccctc accctgagat ggggtaagga gggggatgag gggtcatatc tgttctcagg 1920 gaaagcagga gcccttctgg agcccttcag cagggtcagg gcccctcatc ttcccctcct 1980 ttcccagagc catcttccca gtccaccatc cccatcgtgg gcattgttgc tggcctggct 2040 gtcctagcag ttgtggtcat cggagctgtg gtcgctactg tgatgtgtag gaggaagagc 2100 tcaggtaggg aaggggtgag gggtggggtc tgggttttct tgtcccactg ggggtttcaa 2160 gccccaggta gaagtgttcc ctgcctcatt actgggaagc agcatccaca caggggctaa 2220 cgcagcctgg gaccctgtgt gccagcactt actcttttgt gcagcacatg tgacaatgaa 2280 ggacagatgt atcgccttga tggttgtggt gttggggtcc tgattccagc attcatgagt 2340 caggggaagg tccctgctaa ggacagacct taggagggca gttggtccag gacccacact 2400 tgctttcctc gtgtttcctg atcctgccct gggtctgtag tcatacttct ggaaattcct 2460 tttggttcca agacgaggag gttcctctaa gatctcatgg tcctgcttcc tcccagtccc 2520 ctcacaggac attttcttcc cacaggtgga aaaggaggga gctactctca ggctgcgtgt 2580 aagtggtggg ggtgggagtg tggaggagct cacccacccc ataattcctc ctgtcccacg 2640 tctcctgcgg gctctgacca ggtcctgttt ttgttctact ccagccagcg acagtgccca 2700 gggctctgat gtgtctctca cagcttgaaa a 2731 //