Dbfetch
ID OK041103; SV 1; linear; genomic DNA; STD; HUM; 5420 BP.
XX
AC OK041103;
XX
DT 14-JUN-2023 (Rel. 144, Created)
DT 15-JUN-2023 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens isolate 0009TL012645-SS-092-506-714 MHC class II antigen
DE (HLA-DPA1) gene, HLA-DPA1*01:03:01 allele, complete cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-5420
RA Singh Y.P.P., Mehra N.K., Ullas U.;
RT "Identification of New HLA Alleles in North Indian Population";
RL Unpublished.
XX
RN [2]
RP 1-5420
RA Singh Y.P.P., Mehra N.K., Ullas U.;
RT ;
RL Submitted (06-SEP-2021) to the INSDC.
RL COE - HLA & Transplant Immunology, SRL Clinical Reference Lab, GP-26,
RL Sector 18, Udyog Vihar, Maruti Industrial Estate, Gurugram, Haryana 122015,
RL India
XX
DR MD5; 7a638dfe95b4329c5be8386945d27472.
XX
FH Key Location/Qualifiers
FH
FT source 1..5420
FT /organism="Homo sapiens"
FT /isolate="0009TL012645-SS-092-506-714"
FT /mol_type="genomic DNA"
FT /country="India"
FT /sex="male"
FT /tissue_type="whole blood"
FT /db_xref="taxon:9606"
FT gene <1..>4921
FT /gene="HLA-DPA1"
FT /allele="HLA-DPA1*01:03:01"
FT mRNA join(<1..100,3685..3930,4271..4552,4767..>4921)
FT /gene="HLA-DPA1"
FT /allele="HLA-DPA1*01:03:01"
FT /product="MHC class II antigen"
FT CDS join(1..100,3685..3930,4271..4552,4767..4921)
FT /codon_start=1
FT /gene="HLA-DPA1"
FT /allele="HLA-DPA1*01:03:01"
FT /product="MHC class II antigen"
FT /protein_id="QZZ69953.1"
FT /translation="MRPEDRMFHIRAVILRALSLAFLLSLRGAGAIKADHVSTYAAFVQ
FT THRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGQAFSFEAQGGLANIAILNNNLNTL
FT IQRSNHTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGELVTEGV
FT AESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTE
FT TVLCALGLVLGLVGIIVGTVLIIKSLRSGHDPRAQGTL"
XX
SQ Sequence 5420 BP; 1433 A; 1272 C; 1054 G; 1661 T; 0 other;
atgcgccctg aagacagaat gttccatatc agagctgtga tcttgagagc cctctccttg 60
gctttcctgc tgagtctccg aggagctggg gccatcaagg gtgagtgctc aggaggacgc 120
aggagcgtcg gggtgagtga tggggtggtt cacatcaatt gctgcttcag ggatcacaga 180
ttttaggggc tcattgatct atctggtcct catagtctat gttccctctg gccctcataa 240
taataacagc aataacagcc agaatttatg agactcctgc atattttctt tccccattta 300
catctcacag gaatcttcaa tgaagataat attccattca tttagaaatt attcctttta 360
tttagaaatt attttgaaaa aactgaagct caaaaagatg aataagtttt ccaaggttac 420
acagcagatc aacgagccaa gtttgaagtc cagacccagc tctgagggtc atacactgcc 480
ttccccagat tcctgcacac agtgacctac tatcagggcc ctcctatctc tctgggatcc 540
ccagcctcta tcttttgtgg ctgctttaca ggaactccga gctatggact ctgcattagg 600
agacgaagtg caaagagtgt ttctgtatcc tccctctctt ctaggaccct agggctcttc 660
ctgggtcttt gtgggtggtc acaagctttc ctctctcaag acagcagggt tgcatggtct 720
tgatagcctt gtgattcggg ttctgagaga ttcaggactg caagggaggc ctagactttt 780
gatagctgca aggactcagc cagagatgga ccgtagtgaa tgctcctttt tcctgtagct 840
gaaatcaggg agaatgacat caagcctgtg catgatgctg tcattccaaa atctagtgat 900
ggggaaggtt agaatccata acgtacaaga tgcacactgg cttcagacag ttttatttaa 960
gatgtgtaga ataaagagga ggtcaggctg ggtagaacca gaagtatcta ttgccctgtt 1020
cgcggtcacc tgagttattt ctaatgttat gttataataa acaccacaat aggcttctct 1080
tcatagatgc aaatactttt tagtattctt ggtagaaatt cctaatgagc tcagctgtct 1140
cttcagggct tccctgccca gtctcttaac atttaaacat gtcatttacc ttaaaaacat 1200
aagtgcaaac caactgataa aaaacaacct tgccttcagt ctgcatcctg tcccagagac 1260
actttctttg tgtcctcaca cgtggagcta agcttctgac ttgtctctgg tacatccctg 1320
aggatcctct catcttggcc atcaggaacc tctacagaag gtcaaattca gtgggttctt 1380
ctcagtgcct ctgacttgag ttactaataa catttgcact ataatccact tctttctgat 1440
gaactaccct gtccttattt ttctcctgtt tacctggatc ctccttatca tcttttaaac 1500
cacctcttaa ctatcatgtt ctctcattat accctgagat ctcggcaatt ctgatttttg 1560
gcactcttcc tggaaaatct tatttaacct gcacctgcca ctaatgactc tcagttctat 1620
ggcctaaatt cctctcctga gaccacccat aatccacaaa tatctatgta ttatttctcc 1680
ttagatgact ttcaggtctt ctaagtgcaa tagccccaca gtaaactcag tatcttctcc 1740
cggtcaggct gtcttccctg agagaagtgg cttttgccct gttttctgaa tgcctacatt 1800
gaagccatct gttccccagg aagccttccc tgatgtgctg tttggtcgca tcttgtgtat 1860
acctatgtat ctgcacttat ccttctgaac ctgctgttgt cctgtcactt gtgtttcctt 1920
ctgtgactta tacgcgtctg cagaacagga cgtatgtatt atttttattt gggtatttag 1980
catctaacag tgtttgacat atagtagtct tttaatacat atttttgtct gaatggaaat 2040
gatattttga agaaaaataa tctgttccat agctggctga tctttggact gcagaacttg 2100
tgaaagtgtt ttttaaaaag cattttaaaa agtacaaggg acattcatgt attaagaaga 2160
tgagtttcca ataactgcta gaggactttg tgtcttttta ttttaccctc tttttcctga 2220
tgagtccttt gagtccttta aactgaggag caagctaagt ttcctagtga aatacctata 2280
ggatttgttt tgtttagttt caaataccac tctttgcttg gccacttact gtgtcaggga 2340
gtcattctca gtgaaaaata agacacaggt cataccctct agacacttac aattacagtg 2400
gcaaggagtc attctcctgt cactgtaagt ggccaagcac agactgggtc cccacatgtc 2460
agggctgaaa actcacaggg aaatctgtga gttgggaggt gagagcagaa gagtcccgta 2520
gttccttctc actctgatgc atttatcatt ctaaacccag actttcacat acacattcat 2580
cgttttcttt catgataata gttgctttta tcctcttatc tttgctaatt cttacaaact 2640
aataaagact aagaaacaaa ataaattaaa tcctacaggt gttccaaact cagcaataat 2700
ttctagttgg cctctaaaac aaaaatcaaa atataaatgt aagaaaagtt tagaatgctt 2760
agtacctgtg tgatgaaata atctgtacac taaaccccca agtcatgagt ttacctatac 2820
aacaaacctg cacatgtact cctgaacata aaataaatgt tgaaatattt ttaaaaagga 2880
aacaaaagtt tggaacaaat gccaaaataa ctgtactgta cttttgaatt tatatgcccc 2940
aaatgaaaaa tattatcaac aaagctatac attctacagt ttcatgttca taaactaaga 3000
cagaaacttt aaaactgtca agagccctaa aatttgaagg atattttctt cttcctctca 3060
attttgtatt tttttctacc ttttctataa taagaaaaag aaaatgtcca ttcccccacc 3120
cccatgactc taaaaacaat tttacatctg tgtcatagaa aaattaagat cttaatggga 3180
gagaaaacct ctctactagt tccgccagta gccgtatgac cttagcaagt tattaatatg 3240
taacttccct gcatttcctt acctgtaaaa tgtatgatat gtatttgctt catagggtta 3300
ttgtgacaat tcagcgagtg aaatatgtaa agtatttaga aggatgcctg gcacaagtaa 3360
gtgctcaaca aatgttagct gtcattgtta ctattactat tgtgtagggt caggatgccc 3420
agactttcaa agaccaggaa gcagcttgac ttatcagtga taaacttttc attttgttct 3480
ttgctccttt ctttttataa ctgctcatct gctctgtatt atttccttta tggtgttgct 3540
ccttcttctt ccccatatgt ccttcctttg acctcttacc ttcttccttt ttatattcat 3600
aagtctttat tcattctcta gctttgacca cttgcatatt caaactgaca ttttgtcgtg 3660
tttttctcta ctgtctttat gcagcggacc atgtgtcaac ttatgccgcg tttgtacaga 3720
cgcatagacc aacaggggag tttatgtttg aatttgatga agatgagatg ttctatgtgg 3780
atctggacaa gaaggagacc gtctggcatc tggaggagtt tggccaagcc ttttcctttg 3840
aggctcaggg cgggctggct aacattgcta tattgaacaa caacttgaat accttgatcc 3900
agcgttccaa ccacactcag gccaccaacg gtacgcccta tctttgcctc ttcctctgta 3960
gcccaactgg aagggatgag agggcctctc tgccaccctc agactaggaa gcctaagtgc 4020
cccctgctgt gtgatcctct tcccctagtg gccatgggct gatcccacta cagcaagggc 4080
ttgcatcctc tcttctcagg agagagaaag gtgagcagag tgaggctggt cagtggtgtg 4140
atacccctct ctgtgattca gagctgccat aaaatctaag gctgaggtag aggaccaccc 4200
tcccctaaga ggtggagcct ttgtgattca tcccagaaga ggggcctaac ctggtgctgt 4260
ctccttccag atccccctga ggtgaccgtg tttcccaagg agcctgtgga gctgggccag 4320
cccaacaccc tcatctgcca cattgacaag ttcttcccac cagtgctcaa cgtcacgtgg 4380
ctgtgcaacg gggagctggt cactgagggt gtcgctgaga gcctcttcct gcccagaaca 4440
gattacagct tccacaagtt ccattacctg acctttgtgc cctcagcaga ggacttctat 4500
gactgcaggg tggagcactg gggcttggac cagccgctcc tcaagcactg gggtatgcaa 4560
ctgcttttct ctccataatc tcctggcatc ctctattcca aagacctggt gtcctctgca 4620
ccagctttcc gcactggctg ggtctcagtc ctctcctcgt cctaacatcc aattaactgg 4680
tccataacct tcaattccca caaccatccc aggccatcac caccctcact gcacctcctg 4740
accctatctc ttcattcttc ccccagaggc ccaagagcca atccagatgc ctgagacaac 4800
ggagactgtg ctctgtgccc tgggcctggt gctgggccta gtcggcatca tcgtgggcac 4860
cgtcctcatc ataaagtctc tgcgttctgg ccatgacccc cgggcccagg ggaccctgtg 4920
aaatactgta aaggtgggaa tgtaaagagg aggccctagg atttgtagaa tgtaaggaag 4980
ggaggaaaaa ttcaatctga taagtgttca ttgatcttct aatgggttaa aagcattcag 5040
ccacataaca acaacaacac cgataactaa ctgagtagtt aatatggtca ggcgctattc 5100
tgaggattta catttattaa ctcactttat tctcacacat agtctttgag gtaggtacta 5160
ttattttcac tatttcacat gagagatact tacatctttt tacatacaca gagactttaa 5220
gcactttgat caagttccca cagctatgaa gtagtagggc tagcttccaa tccagaaagt 5280
ctggatccaa gactgtttat ccactgtcct attcacccta ttttgtgaag gaaaagacca 5340
agttcaaatt ctccagagtc cattgccaaa taatggagtc agatctatat ttctatacat 5400
aattacaaca cagtgtggtg 5420
//