Dbfetch
ID OD953303; SV 1; linear; genomic DNA; STD; HUM; 11461 BP.
XX
AC OD953303;
XX
PR Project:PRJEB44532;
XX
DT 14-MAR-2023 (Rel. 144, Created)
DT 15-MAR-2023 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens, HLA-DPB1 gene for MHC class II antigen, cell line
DE DKMS-LSL_ID18903787_DPB1_1, allele HLA-DPB1*11:new
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT ;
RL Submitted (27-APR-2021) to the INSDC.
RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL Saxony, 01069 Dresden, Germany
XX
DR MD5; 557c3931bcc6184202c59ee58840ffe5.
XX
FH Key Location/Qualifiers
FH
FT source 1..11461
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /cell_line="DKMS-LSL_ID18903787_DPB1_1"
FT /db_xref="taxon:9606"
FT exon 1..466
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*11:new"
FT /number=1
FT CDS join(367..466,5001..5264,9216..9497,10045..10155,
FT 10485..10504)
FT /codon_start=1
FT /transl_table=1
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*11:new"
FT /product="MHC class II antigen"
FT /function="antigen presenting molecule"
FT /protein_id="CAG4707622.1"
FT /translation="MMVLQVSAAPRTVALTALLMVLLTSVVQGRATPENYVYQLRQECY
FT AFNGTQRFLERYIYNRQEYAHFDSDVGEFRAVTELGRPAAEYWNSQKDLLEERRAVPDR
FT MCRHNYELDEAVTLQRRVQPKVNVSPSKKGPLQHHNLLVCHVTDFYPGSIQVRWFLNGQ
FT EETAGVVSTNLIRNGDWTFQILVMLEMTPQQGDVYICQVEHTSLDSPVTVEWKAQSDSA
FT RSKTLTGAGGFVLGLIICGVGIFMHRRSKKVQRGSA"
FT intron 467..5000
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*11:new"
FT /number=1
FT exon 5001..5264
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*11:new"
FT /number=2
FT intron 5265..9215
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*11:new"
FT /number=2
FT exon 9216..9497
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*11:new"
FT /number=3
FT intron 9498..10044
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*11:new"
FT /number=3
FT exon 10045..10155
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*11:new"
FT /number=4
FT intron 10156..10484
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*11:new"
FT /number=4
FT exon 10485..11461
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*11:new"
FT /number=5
XX
SQ Sequence 11461 BP; 3104 A; 2544 C; 2964 G; 2849 T; 0 other;
taatccctgt agatgggcca gcagaatatt tgagatcacc ttcagagcaa agaaaacgca 60
taatctcccc aaacatcatg acttatctga ctggttaaaa tgagtatcac tgtctttcct 120
ccgtcatctt aagtgcatca caggctttat attttcagac ctttcatact aactttctgc 180
ctagtgagca atgactcata caaagctcag tgtccattgg ttcttttctc agactctgtc 240
caatcccagg gtcacagaag actacttggg ttcatggtct ctaatatttc aaacaggagc 300
tccctttagc gagtccttct tttcctgact gcagctcttt tcattttgcc atccttttcc 360
agctccatga tggttctgca ggtttctgcg gccccccgga cagtggctct gacggcgtta 420
ctgatggtgc tgctcacatc tgtggtccag ggcagggcca ctccaggtaa gagccgagct 480
gccattcttg gagggtctgg ctcagggaac aattcctagg ggacgttatc tttaagggat 540
caaattctga gacaggctgc gggggctcct gccctaaggc agtgtcctct cttcccagct 600
agagaaagag gttcatcccc tataggatag cttgctaccc tactggccta ttctctctcc 660
aaggacatgg gtacagtaaa cagagagagg tgcccagtgg tcagtatgct tgtctttggg 720
aaaatgggac caagaggtcc aggataacct tggacagaca aggtttgcag agagagaagt 780
tggcaagtgc aggctcctgg gcgtgttcac atctgcatcc agcctggagg ggactcaggc 840
agagagccct aagctggagt gtccaggctc tgaggatcac tgaggattca gtgctcacga 900
agaatgcctc ttattcccca gggtggagca ggagcccaca ccccttggac aattaaggag 960
agaagggagg gagggggata ggttttagcc cctgaaggca ttctcattaa aggtacttct 1020
cccagcctcc ccagaacttg gttagggtac tagagtgggt tgcgacttgt aggaagaatg 1080
agatgaggtt gtgtgggtgc atgacaggga ttgagtgtag gttatcagac agccaaggaa 1140
gcagtaacca agtgaaaaat ctcttcttcc tgctgcctcc ctgtggctgg tgtaatatta 1200
tggcatctat gatccattgt ttttctctca ggatactctc aggatatttc tttttatata 1260
tatatatact ttaagttcta gggtacatgt gcacaacgtg caggtttgtt acatatgtat 1320
acatgtgcca tgttggtgtg ctgcacccat taactcgtca tttacattag gtatatttcc 1380
taatgctatc cctcccccct ccccccaccc cacaacaggc cccggtgtat gatgttcccc 1440
ttcctgtgtc catgtgttct cattgttcag ttcccaccta tgagtgagaa catgtggtct 1500
ttggtttttt gtccttgcaa tagtttgctg tgaatgatgg tttccagctt cctccatgtc 1560
cctacaaagg acatgaactc atcctttttt atggctgcac agtattccat ggtgtatatg 1620
tgtgcatttt cttaatccag tctatcactg atggacagtt gggttggttc caagtctttg 1680
ctattgtgaa tagtgccgct ataaacatat gtgtgcatgt gtctttatag cagcatgatt 1740
tataatcctt tgggtatata cccagtaatg ggatggctgg gtcaaatggt atttctagtt 1800
ctagatcctt gaggaattgc cacactgtct tgagatacca tctcacacca gttaaaatgg 1860
cgatcattaa aaagtcagga aacaacaggt gctggagagg atgtggagaa ataggaacac 1920
ttttactctg ttggtgggac tgtaaactag ttcaaccatt gtactctcag gacatttcta 1980
gtccaaattt acaccaacac tctgagagga aggactgcaa agtaggtacc ttagttttcc 2040
actgacttcc acttttcctg cttacaccct tcctcctaga cctctccaca cccctcctag 2100
gacacaccta gaaggtactg acatcatgtc acctcctcat ctttcagggt agcaaggttg 2160
gaatctcctg aatacagccc ctcaagccct aaaacctctt atctattacc ttgggttcat 2220
tgtccaggaa ggggaggaga acttgaactt gtagtcacag aagggtgctg agaactaacc 2280
agcaggacgg ctcagccctg ggaactgcag aggggtgagg ctggggagag aggaggctgg 2340
agcagcactg gtgacactga acagtgtcag gaggaagtga cggatgcagc gcccccatcc 2400
cataggcaga gctgtcatgt gggatgaggg acagtgttgg gagccaccaa ggaaacccag 2460
aggtggggga gcagagagca gaagggggca tgtgatgctg ggcagtgaaa gggaggacag 2520
gcaaaggctg ggttgaggtt tgtaggggga atgagatgag gcagtggagc catgtgacag 2580
ggactgaggg tagattactg gagctccctg cgtagaatga atgttcaatc aaaacctgct 2640
ggagggagag ctggagccat aggggagtgg gtaaagtggg cagggttgat tccacaattc 2700
cctgcatgct cccccaactc cacacacatc cccaacctca aacagggcac aagaccaaag 2760
ggctgaggag ccaggctata gcttaaagag gctgggggag aaaagcttgg ctgagacaac 2820
ccatagggag ctagaggttt ttaatatatc ctattctgaa taagagacga attcattcag 2880
atcagtggtt tcaaaccgtg ctctgggcaa ctcaattgct aagggttcca caaacaggat 2940
aaagtttctt atatacaaaa aaaatgaagg tttcaaatta caccataaaa cccctcattg 3000
cttatgtcta cttggcaggt aaaattccat ttcaaaagtt aaatgtactt aaaaaattac 3060
ctaagactgg gtaaattaaa aaaattaaat gttgcaaaga aaaaattcaa aattcttatt 3120
cttgaatgaa aaacgttctc ttactggtga ttgaggagga gaaacaaaga ctaacaaatg 3180
aaaatgggag aatccacact cagagtgggg caattgaaca ggcaggggcg gatggatggc 3240
agaggaggag gaatctggac tcaaggagct ggggggctct gggcctggaa tttcagggtc 3300
tggggcccaa ggcaccagga gaagaggcag gtcaggatat ctgagtcaag acctgggatc 3360
ttgccttagc aatgacactg gagactaaag gtggactcca tggtgccctt gagcccagcc 3420
ctaccccatc tccactatcc tctgccacca gctgtgcaac ttctgctagg ggtgaggtta 3480
ataaactgga gaagttaatt tgtggagcat gaaacagatg agcagaacaa tcacagcacc 3540
ttaatttccc cagtgtgccc aagaacagag caggcctgaa gacactcaaa cagaaacaaa 3600
catgtgccgt gtcactgata attctgtgta gacacacacc tgccagacac tgctcatggc 3660
actccctagg aagaacagca tgtgggaaag gctgccaaaa ttgttcatgt aaaaattaca 3720
tcaatgctgt cttcctcggt gctgcctatg cagctggcag ccatctcttc ctccacatca 3780
tggcctccct cagactcctc atgaaggata agatcctcaa aaagaggacc aacaagttca 3840
tgaggcacca atcagactga aatgtcaaaa ttaagcataa ctggcggaaa cccagaggtc 3900
ttaacagtag ggttcgtaga aggtccaagg gccagatctt gatgcccaac attgcttatg 3960
ggagcaacaa caacaacaaa aaacacatgc tgcccagtgg cttccagaag tttctggccc 4020
acagcctcaa ggagctgaaa gtgctgctga tgtgcaacaa atcttactgt gctgagatcg 4080
ctcacaaaat ttcctccaga actgcaaagt catcatggaa agagtcaccc agccggccat 4140
cagagtcacc aaccccagta ccagggtgca cagctaagaa aatgagtaga aagttcatgt 4200
ccacgttttg tgtgtaaata aaaccataaa aactgccaaa aaaaattaca tgaatgcctc 4260
taaacccaaa ggactctacc cccacaggtc cctggttgtt gtggtgattt tcattgtgta 4320
aaatactttc cacatctttt gacaccaagt ctttctgcag ccatgtttga aaattaactt 4380
tcaggctaca gagtctttct tataccaaag ttgaagaaag ttttaagaaa tatatttcta 4440
catctcctac atgcaaaaca acaggagcaa gttgaggaat tctcaagaaa ctggtcgaga 4500
agagagagcg cttagctatg gaaaagagaa agaaggaagg gagggcttcc tggaggaggt 4560
ggcatttgaa ccaggactga catcaggatg gaaatgtcag tcagggagtt aagtaggggg 4620
agcagctccg ccctccacgt ccccagctcc tcccgcccct gttttttctc ccagtgaccc 4680
cacgtgaaac gtctccgcct cctccagcca ccagcagaag ggactgcctt ccccttagtg 4740
ctcgcccctc cctagtgatc actcagtgcc cctgagctca ttcttttcag taaattctct 4800
ctctgcgtgg tgagaaaaca ggcctggaga ggctctgcga cccgcttagg accacagaac 4860
tcggtactag gaaaactcct attttaaaat ccagccctga gtgggaagat ttgggaagaa 4920
tcgttaatat tgagagagag agggagaaag aggattagat gagagtggcg cctccgctca 4980
tgtccgcccc ctccccgcag agaattacgt gtaccagtta cggcaggaat gctacgcgtt 5040
taatgggaca cagcgcttcc tggagagata catctacaac cggcaggagt acgcgcactt 5100
cgacagcgac gtgggagagt tccgggcggt gacggagctg gggcggcctg ctgcggagta 5160
ctggaacagc cagaaggacc tcctggagga gaggcgggca gtgccggaca ggatgtgcag 5220
acacaactac gagctggacg aggccgtgac cctgcagcgc cgaggtgagt gagggctttg 5280
ggccggcggt cccagggcag ccccgcgggc ccgtgcccag ggcgcaggag cagccgggtt 5340
ggcctaaggg accttagtgc cgggcggaaa ggggactttg ggttggggat tcatgggggg 5400
agcccatctg gagcttgtca ggggagcgag cgcggggacc tggactgggc tgagcatgga 5460
gtgaggagga cgggagcaga gagaccccgg ggacttcatc aggcctggca gctgactgca 5520
tgtggggtga aaaaaaggaa gccacaggac agcgcacaag ggtatggtgt ggagatggag 5580
gtggagatgg cacagcaggc cacacagaga agaaacctac agggagttag ctgggtttga 5640
ggtgcttgag gggcagatgg gtggtctgat gggcaggtag acagaagggt ctgcagccgg 5700
ggaggagact gagatacatg agaccatcca gggagagggg acccaggggg aagagcaaag 5760
gactggatcc tgggaactgg acagttgtga tttggccaag acagaaaagc ctgtgaaaga 5820
gaccaataaa acccaagtgc agtgtgagga gaggcccgca gagaagagtc ttggaagctg 5880
aggggaggtg acctcagcag cacagtggac agcggtgcca gtgacttggg aaggtcagaa 5940
aacagaagat ggaaagtggg tttggaaacc agggagacct ggggagagca ggttggccgc 6000
agcggcagga gctggaatgg gagggggtgc atgaggctga gtgtggcgca tcctcctcgg 6060
ggctgagatg gattttactt gtcttgggtt ccccacggct gtcacagggc agtgtctgag 6120
ttcattcgtc tttttccttc aggaagtctg ggtgtaaagg gatggagaga ggtgaggtgt 6180
gtgcagtaag aggatttctc aaggatggga caggaaggcc ttggagcttt ggcttcctcc 6240
tgtgaacttg tggggtgggg agcctggtgc accaaccttt gggacttgag ggagtagtat 6300
caggatgtgg gattgagccc tggacctttt ttctagaaag aggaaaaaaa tgaagggagg 6360
aggaggagga agctggggag atcacacctt tgattttctt gttcctggaa agtgaaagga 6420
agttcacctg ctatgagtga gaaggtggac acactgggtg gggatgaggt gagtgacatg 6480
agcttaggaa agttgctgag gtaattggtt gagagaggtg ttcaaataaa agtaatgcaa 6540
ttggcaaaaa ctgttactaa gactttgtag aggcacaaat cagtgacatg gcagcatctt 6600
ctttcacagt aatcaactgc cagattgcag ggagccctga taccagccta aggagtgtga 6660
gtttctcctc taggcccaca ggtccccaac ctcactcctc cgaagactct actggagatc 6720
atctgtgatg cgcagatacc cagactcact gccccgagac tcagattccc tgggtgggga 6780
ggtctgggga tctctgcttg taatcagctc cctagaggtt cccatgtagc cggataagta 6840
ttgtcagaac actgaagatt tttgaaaaat gaaaaagaga aggttggaga tgtgtcttca 6900
gaagactact aagggtgctg ggtagaggag ggaccagagg cagggagatg aggtaggaaa 6960
ctgctattat ttgtcaggga aattgcaatc aagaaatgag ttagaacagg gaaaacacag 7020
aggcagggga gaggtggaag ggggaggaaa ggagtagtga caattccagg gtgtatgctc 7080
acccaaatct agaagtaatt gagcaaatgt tttctgggca ttagagaagg caactagaac 7140
aaacaggaat ccttgccttg gtgaaatgta tttgaactgg gtcagaaatg aggccattgg 7200
gtatcaagcc ttaactccag cgccccctgg aggtcgctga tgtggctcca ggctgacctg 7260
ctcctgtcaa agaatattga gcaagatgcc tctcatggaa tgttctggga ccttaaaaca 7320
gatacccaag tattccccct gatttcatgg ttcccagaag ctctatgggg aagaaattgt 7380
acgtaattca caactgagat ttagacataa gttgaatagt gtaatggacg ttgagttaac 7440
cgaggtaatg aagtagtgag acacaggtgc ccctgaaata aactcacatt gagggaagag 7500
gctgacaatg tggatcagtc tgtaaacaag gcaaaaatac aatagggagt aagggttgtg 7560
tgtcagttca agactgtact tttacctggc ccagcgccat gttggggtat ttgtgttctc 7620
caggaagtag aaaggaaaga actgagtgat tagggaccta gaagactaat ttgagacatt 7680
cctcttgatg aactgttctc tagggtagtc ctctgaaaga gctgttctct agtggatctc 7740
cctgaatgaa ctgttctcta ggagcacttg acccttttct gtgtttgttt tttgttttgt 7800
gtttgtgttt gtttttgaga caggttctcg ctctgtctcc caggctggag tgctgtggcg 7860
ccatcatgac tcactgcagc ctcaacctcc tgggctcaag tgatcctcct gcctcagcct 7920
cccatgtagc tagaactaca gatacatgta ccaccatgtc tggctaattt atttttcttt 7980
ttagagatgg gttctcacta tgttgcccag gctggtctcg aaaccctggg ctcaagtgat 8040
cctcacgcct cagcctccca aagtgctaag attataggca tgaccaccat gcctggcctt 8100
ttctgccttc cgagaaggaa aaaggtactg gtggcagaga tccaaaagaa aagttgccag 8160
tggcagtgtg gaaattgacc tgagaacaac agaacaagct ggggcacaaa tgcaaagatg 8220
cagagggagg caacatctgg ttatctgtga gaccttcatg ggacctgaag acacatcctt 8280
ttggaaaagg atgggatttc tactactcaa gcatgtaggg gctcaggata ttatgtaaat 8340
atgaagattt tgagtttttg taagtgaggt aaaaaaaata cccaggttat ttacagaata 8400
agacatgtca agctctcttc attttctttg tattttcatg aaataaaggt attagattaa 8460
caggccacca taatgccatt gtctgtatat cttaatttca agatattatt tgagtaattt 8520
ttgcatcctt tgtatcaaga tagaactttg aaaagacagg taatttcaca gttgattaaa 8580
tattctttgc ccaaattact tttggttaaa atttctccta tatgtgctac agagtgcaaa 8640
ctctgtctcc ctgccattcc gctatatact tactaattat tattttattc aagatcatgc 8700
atgctctact tgaaggtcta tcttttcagt gctaccctta cccactagcc taatcacatt 8760
atatctattt tcaacatcta ggaatcaatt acgtagtgaa catgcctaag aaataataat 8820
ctgggcagat gcagtggctc aggcctgtaa tcccagcact ttgagaggct gagcgggtgg 8880
atcacttgag gtcaggagtt ggtcaagtgc tcctagagaa ccagcctgac caacatggag 8940
aaaccttgtc tctactgata atacaaaaat tagccaggtg aggtggcagg cacctataat 9000
cccagctatt cgggaggctg aggaaggaga attgcttgaa cccctgaggt ggaggttgca 9060
gtgagccaat attgcgccac tgcattccag acttggcaac agagcgacac tccacctcaa 9120
caaaaagaaa gaaagagcga gattacgtct caaaaaagga aggaaggaag gacaatctca 9180
aatgctattt cattattttc cttccccact cgtagtccag cctaaggtga acgtttcccc 9240
ctccaagaag gggcccctgc agcaccacaa cctgcttgtc tgccacgtga cagatttcta 9300
cccaggcagc attcaagtcc gatggttcct gaatggacag gaggaaacag ctggggtcgt 9360
gtccaccaac ctgatccgta atggagactg gaccttccag atcctggtga tgctggaaat 9420
gaccccccag cagggagacg tctacatctg ccaagtggag cacaccagcc tggacagtcc 9480
tgtcaccgtg gagtggagtg agtctctgat gaccgtctag accccacctc tgaagagcag 9540
gggactctct ggctctgggg tccactcatc ttatcttctg catctatacc ctggggccat 9600
gtccaaaccc catctttctt ctataccagc tcctgagcat agtttgaagc cagggcaatg 9660
gagacttcct gaccttggct taggggttcc tgaagattca tagttctccc ccttgtcaga 9720
gaatctaggg acactggctg atctcgaaac cctcacacac aggaactgac ctcacacata 9780
ggaacagttc tcttctttca gcattttagc ctcttctcag gcattttgag aggcaacttc 9840
tagaatcagc atttgccacc ttgttgaggt cacacccctg ttccggacat gagggtggct 9900
ctttctgaat ttcctcttag caagcttttt cccctgcact gtcttcatcc cgatattctg 9960
catcacgctc cagaatctca gacaggacat gagtagggat gcagctggtg gaggtgacac 10020
taaacctggg tctgtccttc ccagaggcac agtctgattc tgcccggagt aagacattga 10080
cgggagctgg gggcttcgtg ctggggctca tcatctgtgg agtgggcatc ttcatgcaca 10140
ggaggagcaa gaaaggtgag aaagcctgca aggtgagcgg gacctacctt cccctggcat 10200
attcacactt actccatgat gagggttcag acagaaaaga aatgtcagaa agctctagag 10260
accactgaaa tcagatagtc ggggaacaaa catgacctat ggcgagaggg ggatcccagg 10320
ctgggatctt aatgcagcca gatgcatgag gtcccaggtg ctcagactcc tgcggggcat 10380
ccattgagtg gtggtcaatg gaatttggtg ggatggaaat gtttctctaa ctatctgagg 10440
tggtttcaat ggctgaatac ataacctttc ctctttcatt tcagttcaac gaggatctgc 10500
ataacaggta atattcctgc tttgatttcc ttggggggtg ggttacagga ggatatgact 10560
cctttctgtg cattgtaata ctgaggctcc tccaggaagg gaatctcagg catgaacccc 10620
tctttcaacc tcagctctcg ggtgagtagg gaaaaagcat tgcacggctc cattgctgaa 10680
ggaagcagag atcagttctg ttctttatca gcctaagatg cagcctctca ccataatttt 10740
tctctcctgg acttaaagga aggaggccag caacctggga taacttgtcc tttaccccca 10800
cagggttcct gacctcaccg aaaagactaa tgtgccttag aacaagcatt tgctgtgttt 10860
tgttagcacc tggttccagg acagaccctc agcttcccaa gaggatactg ctgccaagaa 10920
cttgctctga agtcagtttc tatcgttctg ctctttgatt caaagcactg tttctctcac 10980
tgggcctcca accatgttcc cttcttctta gcaccacaaa taatcaaaac ccaacataag 11040
tgtttgtttt cctttaaaaa tatgcatcaa atcgtctctc attactttga gggttttagt 11100
aaacagtagg agttaataaa gaagttcatt ttggtttaca cataggaaag aagagaagca 11160
tgaaagtgga gatatgttaa ctattgtata atgtggcctg ttatacatga cactcttctg 11220
aattgactgt atttcagtga gctgccccca aatcaagttt agtgccctca tccatttatg 11280
tctcagaccg ctattcttaa ctattcaatg gtgagcagac tgcaaatctg cctgatagga 11340
cccgtattcc cacagcacta attcaacata tatcttactg agagcatgtt ttatcattac 11400
cattaagaag ttaaatgaac atcagaattt aaaatcataa atataatcta atacacttta 11460
a 11461
//