Dbfetch

ID   OD916742; SV 1; linear; genomic DNA; STD; HUM; 11541 BP.
XX
AC   OD916742;
XX
PR   Project:PRJEB44240;
XX
DT   14-MAR-2023 (Rel. 144, Created)
DT   15-MAR-2023 (Rel. 144, Last updated, Version 1)
XX
DE   Homo sapiens, MICA pseudogene, cell line DKMS-LSL_ID18956474_MICA_2, null
DE   allele MICA*008:new
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RA   Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT   ;
RL   Submitted (21-APR-2021) to the INSDC.
RL   DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL   Saxony, 01069 Dresden, Germany
XX
DR   MD5; 830d6ad2ac8e2c33444a2813a26b766f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..11541
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /cell_line="DKMS-LSL_ID18956474_MICA_2"
FT                   /db_xref="taxon:9606"
FT   exon            1..86
FT                   /gene="MICA"
FT                   /allele="MICA*008:new"
FT                   /number=1
FT   CDS             join(17..86,6927..7181,7456..7743,8331..8609,8709..8844,
FT                   11396..11523)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="MICA"
FT                   /allele="MICA*008:new"
FT                   /note="MHC Class I chain-related gene null allele"
FT                   /pseudogene="allelic"
FT   intron          87..6926
FT                   /gene="MICA"
FT                   /allele="MICA*008:new"
FT                   /number=1
FT   exon            6927..7181
FT                   /gene="MICA"
FT                   /allele="MICA*008:new"
FT                   /number=2
FT   intron          7182..7455
FT                   /gene="MICA"
FT                   /allele="MICA*008:new"
FT                   /number=2
FT   exon            7456..7743
FT                   /gene="MICA"
FT                   /allele="MICA*008:new"
FT                   /number=3
FT   intron          7744..8330
FT                   /gene="MICA"
FT                   /allele="MICA*008:new"
FT                   /number=3
FT   exon            8331..8609
FT                   /gene="MICA"
FT                   /allele="MICA*008:new"
FT                   /number=4
FT   intron          8610..8708
FT                   /gene="MICA"
FT                   /allele="MICA*008:new"
FT                   /number=4
FT   exon            8709..8844
FT                   /gene="MICA"
FT                   /allele="MICA*008:new"
FT                   /number=5
FT   intron          8845..11395
FT                   /gene="MICA"
FT                   /allele="MICA*008:new"
FT                   /number=5
FT   exon            11396..11541
FT                   /gene="MICA"
FT                   /allele="MICA*008:new"
FT                   /number=6
XX
SQ   Sequence 11541 BP; 2372 A; 2964 C; 2776 G; 3429 T; 0 other;
     tggcgacgtc ggggccatgg ggctgggccc ggtcttcctg cttctggctg gcatcttccc        60
     ttttgcacct ccgggagctg ctgctggtga gtggcgttcc tggcggtcct cggcggagcg       120
     ggagcagtgg gacgtttccg ggggtcgggt gggtagcggc gagcgctgtg cggtcagggc       180
     ggggctcctg tgccctgtcg gtggcgcagg gagctggacg cggcccgtta ccgccacact       240
     tcagccctgc ttccccgtca cttttcagtc ctcctcggga tcgcgcatca cctgcacttt       300
     ctggtctcct cctgctcttt ctctcctcgc gtctcctccg cttcctctca cttttcggac       360
     aaaccagtcc ttctgaggcc catgggttcc cgggctgcct ccggggctgc tcctgtgaat       420
     ggcattcgag tgcccttcca gcgcggccac tgaagcagcc acaacccccg gtgctcgggg       480
     cggctctcag gtccctgaag tcctgtcctc tcccggagcc gacgtgttct cagctcctgg       540
     gccgcagctc ctggagtagg ggccctcctt tctcgggacc cggagctggt gcttcctgct       600
     gctgtgggga ctgtgggggg tcctgactct caagctgagg ggttggagtc tgcaggctcc       660
     gggcagagga ttcttcctgc gacttctctc atccccagct cattctcccc tcgcctctgg       720
     ctccgagggt cctctcctct ctctcatccc acccctacta atgaccagtg atctaaggac       780
     accagattcc ctctcacctc ctccctgccc atctcagggc ccgctgagtc cttttgccct       840
     cccagctccc tgctacccct tcctgtgtgc tgttctctga tccatttcta gggtgtcctc       900
     tgccctcatc ccctgtcccc gccaccgaag gtccctcctg caccccttat gggcctttcc       960
     tacaagcagc cttcacccag tgctgcccct atgcctcccc gttcccaaat gtccctgact      1020
     ctaactttct ggtgctgcct tttatccggg ggggtcttcc ctccatccca ctcccctcca      1080
     gacccccaag gggaaccctg atgctaatgg cagttgggcc ttaggcaggg cgcagggcag      1140
     cgcagatgcc ccctcccctc cagtgcagat gcctgttctg gaccctgcct cattgtggcc      1200
     ccttccccac tccttcgtcc tcagcctcac cctcttgagg accccaccct ccagcccaca      1260
     ggtgctggac catccctccc tggtccctcc gcccctctcc accttgggac cttgtgctgc      1320
     tcctatctct tgcccagctg ccttgggccc tcagcacgtt ctcatctttc agtgggaaag      1380
     tgggagtgct ggagcatatg acagtgctga gcatctttcc caagccccac cctcccccag      1440
     agcaccctcc cctcctgtcc tcaccctacc ccaagttctc ccacagtcac tcctgcccca      1500
     tgctcatgcc gccctccagt tcttgctctg cccatctccc ctccccaacc cagacctaaa      1560
     acaggctgtt gggccaactg ttccttgacc ttccttcttt tcttttggtt ccttgacccc      1620
     agtgggctct cactccccac accgcatatc taaaatctgt tttgcctgct cttggggtgc      1680
     cactgctccc cctccagcat tactcctttt ggcaggtcct tcctcaggct gagaatctcc      1740
     ccctctacct tggttttctc tctctggcca gcacccccac tccttgcttt gtttttaatt      1800
     tttaactttt gtttgggtac gtagtagata tatatgtata tatttatggg gtacatggga      1860
     tattttgaca caggcctaca atatgtaata atcacatcag ggtaaatggg ttatatcaca      1920
     acaagcattt atcctttctt tgtgctacaa acaatcccat tatgctcttt cagttatttt      1980
     taaatgtaca ataaattatt gttgactgta ctcaccctgc tgtgctatct actagatctt      2040
     attcattcta attatatttt tgtacccatt attaaccatc cctgctcccc cactccccac      2100
     tacccttctc agcctctggt aatcatcatt ctattgtctc tccccatgag gtccattgtt      2160
     ttaaattttg gctgccacaa ataagtgaga acatgcaaag tttgtctgtc tgggcctggg      2220
     gcttatttca cttcacagga tgacctccag ttctttgcaa atgacacgat ggctgaatag      2280
     ttctccacat acacatgtac accacatttt ctttatccat gcgtctgttg atggacactt      2340
     agattgcttg cagatcttgg ctactttgaa tagtgctgca ataaacatgg aaaagtagat      2400
     agctctttaa tataccgatt tcctttcttt ggagtatatg cctaacagtg ggagtgctgg      2460
     agcatatgac agctctattg tatttttagt ttttggaaga acctccacat tgtttcccat      2520
     agtggttgta ctagtttacg ttcccaccaa cagtgtacat cctcaccagc attccttatt      2580
     tctacatcct cgccagcatt ccttattgcc tgtcttctgg ataaaagcca gtttatctgg      2640
     ggtgggatgt tatctcgtag gagttttgat ttgccttcat ctgttgacga atgatgttga      2700
     gcaccttttc atatacctgt ttgccattta tatgtcttct tttgagaaat gactattcag      2760
     atcttttctc atttttaaat tggattatta tatttttttt cctatagttg ttcgagctcc      2820
     ttatatgttt cagttactga tcctttgtca gatgaatagt ttgaaaatat tttctcccat      2880
     tcttggatgg tctcttcatt ttgtttattg tttcctttgc tgtgcagaag cctttttact      2940
     tgatatgatc ccatttatgc aattttactt tggttacctg tgcttgtggg gtattacttt      3000
     aaaaatcttt gcccagtcca atatcctaga gagtttcccc aatgttttct tgtatagttt      3060
     catagtttga ggtcatagat ttacatcttt aatccacttt gatttgattt ttgtatatgg      3120
     tgaaagacag ggtctagttt cattcttctg cataaggata tctagtttcc ccagcaccat      3180
     ttttggagag actctccttt gccaatgtgt gttcttggta cctttgttgg aaatgagttt      3240
     actgtagatg tatggaattg tttctgggtt ctctattctg tttcattggt ctgtgtgtct      3300
     gtttttatgc cagtatcatg ctgttttggt tactgtagct ctgtagtata atttgaagtc      3360
     agataatgtg attcctctag ttttgttcat tttgctcagg atagctttat ctattctggt      3420
     ttttttgtgg ttccatatgc attttaggat tatttttatt atttctgtga agaatgtcat      3480
     tagtgttttg atagggattg cattgaatct gtagattact ttgggtagta tggatatttc      3540
     aacaaaactg attcttccaa tccatgaacg tggactatct tttccatttt ttgtgtcctt      3600
     caattttttg catcagtgtt ttttgttttt ggtttttgag atggagtttc actcttgttg      3660
     cccaggctag aatgcaaggg tgtgatcttg gctcaccgca acctccgcct cccaggttca      3720
     agctattctt ctgcctcagc ctcccaagta gctgggatta caggcatgtg ccactgtgcc      3780
     tggctaattt tctattttta ttagagatgg ggtttctcta tgttggccag gctagtcttg      3840
     aactcctgac ctcaggtgat ccacctgcct cggcctccca aagtgctggg attacaggca      3900
     tgagccacca cgcccagcca catcactgtt ttatagtttt tattggagag gtctttcact      3960
     tcttcagtta ggtttattcc tcagtatttt attttatttg tagctattgt aaatgggatt      4020
     cgtttcttga tttctttttc agattatttg ctgttagcac tgatttttgc atgttgattt      4080
     tgtatcctgc aactttactc aatttgttct tcagttctaa tggttttttg gtggagtctt      4140
     taggtttttc caaatatcag accacatgat ctgcaaacaa ggataatttg acttcttctt      4200
     ttccagtttt aatgcccttt ctttctttct cctgtctgat tgctctagtt aggatctgca      4260
     gtactgtgtt gcataactgt ggtaaaatta gtcatccttg tcttattcca gatcttagag      4320
     aaaaggcttt cagttttccc ccattcagta tgttactagc tgtgagtttg tcatatatgg      4380
     cttttattat attgaggtct gttccttgta tacttagttt tttgagagtt tttatcatga      4440
     agggatgttg aatttatcaa atgctttttc agtatcaatt gaatgatact ggcttttgtc      4500
     ctttattctg ttgatatgac gtattacatt gattgatttg tgtatgttaa atcatccttg      4560
     catacctgga atacattcca cttgctcata aagaatgatc ttttttaatg tattgttgaa      4620
     tgtggtttgc tagtatttcc ttgacgattt ttgcatcggt gttcatcagg gatataggcc      4680
     tgtagttttc ttttttatga tgtgtctttg cctggttttt gtatcaggat attcctggct      4740
     ttgtaaaatg agtttggaag tattccctcc tcctctattt ttcagaacag tttgaatagg      4800
     actgacatat gttgttcttt aaaagtttaa ttgtggtaaa ttatacatta cataaatttt      4860
     actgttttaa ccacttttaa gtgtatactc ggtggcatta gatacattca catttttgtg      4920
     caacccaaaa ctctgtgccc attaatcggt aactccccat tcctccctac ctctggcccc      4980
     tggtaaccac cattctactt tttgtttcta tgaatttgac cactctaggt acctcattta      5040
     agcagaatca tgtaatgttt gtctttttgt ttctggctta tttcacttat aatatttttg      5100
     aggttcggtg ggcacagtgg ctcacgcctg gatttccagc actttgggag gctgaagcag      5160
     gtggatcacc tgagtttcgg agttcgaaac cagcctggcc aacatggtga aaccccatct      5220
     ctactaaaaa taataaaagt tagccgggcg tgatggcagg tgcctgtaat cccaactact      5280
     tgggaggctg aggcaggaga atcgcttgaa tccgggaagt ggaggttgca gtgagctgag      5340
     atcaggccac tgcactccag cctgggcaac aagagtgaaa ttccatctcc aaaaaaaaaa      5400
     ataaaacaat aataataata atatttttga ggttcatcca agttgtagta tgggtcagaa      5460
     tttcattcct tttaaggatg gataatactc attatatgta tgtaccacat cttggttatc      5520
     catccctcag acaatggaca cttgggttac ttctaccttt tggatattgg caaatatttc      5580
     atttcctttg ggtatatatt tatttccttt gggtatttct tttgggtata tatccagaaa      5640
     tagaagcagt acacaggggc ttcattttct ctgtctcttt gccaaccttg ctctgtgtgt      5700
     gtgtgtatgt gtgtgtgtag gtgtgtgata acagccatcc tgattggttt caggtggcat      5760
     ctcattgtgg tttggatttg cattttccta atgagtgctg atattgagca tcttttcatg      5820
     tgtttgttga tcatttgtaa ttttctttga agaattggcc atttaagtct tttgcccatt      5880
     ttttccccca catagcttct cttatcagat atatgacttg caatatttat ttcatttcgg      5940
     ggttgattgc tttttcactc tgattgtgcc ctttgatgca tagatgtttt gaattttcat      6000
     cagtctactt tgtcagttct ttctattcta tctgtgcttt ggtgtcatat ccatgaaagc      6060
     actgtcaaat cctatgtcat gaacattatc cccaatgttt gcttctaaga aatttttagg      6120
     ttttagttct tgagtgtaga gtttaggtct ttgattcatt ttgagttaat ttttgtatat      6180
     agtgcaaatt aagggtccaa ttttatttta acaccccctg cccccagaac tatttgctga      6240
     aaagatcaac tgactctttg tcacctgctc accccagtgg acactagctg ttccatccaa      6300
     ttgctgtcct ggggccttgt catgctactc ttccactttg aacccaagcc cacaccgttc      6360
     gttgctcccc tctgggatac tgaccccact ataaacttct ctggggctac aaccttccta      6420
     ccctttgtgc ctcatgacca ccccctccct tgtccccgcc atgcccatga tgagtctctt      6480
     ctcgaggcag ctccccttgc ctccatctca ccctcagcct atgcaccaca gccacactgg      6540
     acatgggtcc ctctgagcct gagtcccttc ccattcccac catcccctct ggcaagacct      6600
     tccttccacc accttcatgc tcctcccttg cccctgcagg gcagcctctc cccttggccc      6660
     ctattccctt agggggcttg tggccaccca gtccttgcac ctggcctaca agtttgccat      6720
     cttcattccc ccttcttctg ttcatcagcc ccctcctcta tcctcccacc ctcacagttt      6780
     tctttgtata tgaaatcctc gttcttgtcc ctttgcccgt gtgcatttcc tgccccagga      6840
     aggttgggac agcagacctg tgtgttaaac atcaatgtga agttacttcc aggaagaagt      6900
     ttcacctgtg atttcctctt ccccagagcc ccacagtctt cgttataacc tcacggtgct      6960
     gtcctgggat ggatctgtgc agtcagggtt tcttgctgag gtacatctgg atggtcagcc      7020
     cttcctgcgc tatgacaggc agaaatgcag ggcaaagccc cagggacagt gggcagaaga      7080
     tgtcctggga aataagacat gggacagaga gaccagggac ttgacaggga acggaaagga      7140
     cctcaggatg accctggctc atatcaagga ccagaaagaa ggtgagagtc ggcaggggca      7200
     agagtgactg gagaggcctt ttccagaaaa gttaggggca gagagcaggg acctgtctct      7260
     tcccactgga tctggctcag gctgggggtg aggaatgggg gtcagtggaa ctcagcaggg      7320
     aggtgagccg gcactcagcc cacacaggga ggcatggagg agggccaggg aggcataccc      7380
     cctgggctga gttcctcact tgggtggaaa ggtgatgggt tcgggaatgg agaagtcact      7440
     gctgggtggg ggcaggcttg cattccctcc aggagattag ggtctgtgag atccatgaag      7500
     acaacagcac caggagctcc cagcatttct actacgatgg ggagctcttc ctctcccaaa      7560
     acctggagac tgaggaatgg acagtgcccc agtcctccag agctcagacc ttggccatga      7620
     acgtcaggaa tttcttgaag gaagatgcca tgaagaccaa gacacactat cacgctatgc      7680
     atgcagactg cctgcaggaa ctacggcgat atctagaatc cggcgtagtc ctgaggagaa      7740
     caggtaccga cgctggccag gggctctcct ctccctccaa ttctgctaga gttgcctcac      7800
     ctcccagatg tgtccaggga aaccctccct gtgctatgga tgaaggcatt tcctgttggc      7860
     acatcgtgtc ctgattttcc tctattgtta gagccactgg ataaagacag agggtcaggg      7920
     actggaccat ccagtgttgt aatcagggca agtagaggac cctccgacag aatcctgagc      7980
     ctgtggtggg tgtcaggcag gagaggaagc cttcagggcc agggctgccc cctctgcctc      8040
     ccagcctgcc catcctggag agttccctcc tggccccaca acccaggagt ccacccctga      8100
     catccccctc ctcagcatca atgtggggat cccagagcct gaggccacag tcccaaggcc      8160
     catcctcctg ccagcctgga agaactgggc cccagagtga ggacagactt gcaggtcagg      8220
     ggtcccggag ggcttcagcc agagtgagaa cagtgaagag aaacagccct gttcctctcc      8280
     cctccttaga ggggagcagg gcttcactgg ctctgccctt tcttctccag tgccccccat      8340
     ggtgaatgtc acccgcagcg aggcctcaga gggcaacatc accgtgacat gcagggcttc      8400
     cagcttctat ccccggaata tcatactgac ctggcgtcag gatggggtat ctttgagcca      8460
     cgacacccag cagtgggggg atgtcctgcc tgatgggaat ggaacctacc agacctgggt      8520
     ggccactagg atttgccgag gagaggagca gaggttcacc tgctacatgg aacacagcgg      8580
     gaatcacagc actcaccctg tgccctctgg tgagcctagg gtgaccctgg agagggtcag      8640
     gccagggtag ggacagcagg gatggctgtg gctctctgcc cagtgtataa caagtccctt      8700
     tttttcaggg aaagtgctgg tgcttcagag tcattggcag acattccatg tttctgctgt      8760
     tgctgctggc tgctgctatt tttgttatta ttattttcta tgtccgttgt tgtaagaaga      8820
     aaacatcagc tgcagagggt ccaggtgaga aaagcgggca gtttctggag atggtaaggc      8880
     ccctgtctgg gcagtagggt cccttcattg ctcctgcaaa gataggcatg ttggtgacaa      8940
     ggcttccata acaggggatg aaagttgggg aatttgggaa gggaatgggg gcagcatctc      9000
     catctacacc cataagtgct gcccaagcaa gggtcaaacg cccagctgtg gcatcctcct      9060
     gctgcaggtg aggagtgggc agcagggagg gctgcggcgc ctgctctgtc cccatcccgg      9120
     tctctgtgtc tcttgaactc actagggcgc atccaggtgg ggtgagctgg gaatcacgtg      9180
     ctgaatgcta agggcctgga tgatcacggc ctcagaggga gcaaatagta aaggcagctg      9240
     tgatctgggg agggccagaa actggagagg aatctgagga gaggcggtgc ccctattccc      9300
     ttcctctctg catccccctc ccctgtttct ccagccatcg gggcggacac cgagaaaaag      9360
     acctatgagg cccagcctgg gggccctgcc tgtgtagccc tttggagacc ccttgtaaca      9420
     gggagggtcc tgagcacaca tggccatctc tgtccacttt gcagctcccc atgcacctcc      9480
     tccaggagct ttcttggggt tgtcgtgtcc tctgcaccat tcgaggccct actctttcca      9540
     ggttcccacg gcctggcctc cctgagtttc ttgcagatga catggatgag tagataagca      9600
     gatgtccctg ggccatttga ggagtggggc ccagcccctc atcagggcag ctgtggtccc      9660
     tgttttcatc ctacctccga gtgttttctt ctccagtccc tgagggacac agtcctcagg      9720
     gcccatattt ttggggattt aatctgtgct ctgtggcctc accttgccct ccctgagcca      9780
     atttcccttt ctaaaggtgg tcactgcctg gtaagtttgg agtaagggac ggtcagaatc      9840
     atttccccta cagtcaggtt gtttgatggg ggatgaaaag agacagcagg aagttttgtg      9900
     tttctgcaaa gacagaagca gttcaggcga cagtaagagg ctggggtgtc caggaggatg      9960
     tgtctggcag tagggtcgct ggtttctcat ccttgaacct aattgcactg tcaatcggcc     10020
     cctcaggcct gagcagatgg gaaggtttgt cccctgccct gcagcaagag ggccctgtcc     10080
     aggaggcacc cacaacaggg gcagtgcagg tctgtggtca ctcctgctct cacctgtggc     10140
     gtctcccgta gagggattgt cagttctggt tccctgtggg caggaatggt ttcctcatag     10200
     gtcactggag ttttggccag gaaaagagta tgaagttcat gtgccagttt ctcaaaattc     10260
     ctgctttcaa tgttgatgtc cagtaaagat attcgtaatt tcagctctat aatcttaata     10320
     ggatttcctc taatattgtg aagcatatta tatgaaacag gaacacaaat ttctcaaaat     10380
     tcctgcgatg tccaataaag attttcataa tttcagctct gcaatcttaa taggatttcc     10440
     taatactgta aagcatatta aatgaaacag gaactcaaat ttggagcccc ctctccagga     10500
     ggttctgtgt ggagatggtg gctgtggcag tggcagttcc caggtgcaga gggtgggcag     10560
     aggcagcctc aggctaaggg gtctccccta ctccacatgg agaaaatccc ttgtaggttg     10620
     caagggcagt ggccgggtgg aatccctgct agggacagag caggaaggcc tcgcagcctc     10680
     accaagcagc agccctgggg tggagctgcg tttccagggt taagcggacc aggcaggagt     10740
     agcggttact caagagcagg tcacaggctt gggttgtgag ggtcaggaga ggccaggcct     10800
     cctcgagcaa ggtgggggtc ccagggtcag gtcaggtgca gatcctgtgg cagccacgtc     10860
     tttccatgct gggcctgctg ggccccccag gcttcctgat ggggtcccca gttaggagct     10920
     gcctgctcag ggctgggagg ggaggagcac tgagctgcag atagagggca gagcccacag     10980
     tgggcagggc ctgccctggt gtgtaggtgc ctctgaagga gaggagggcc tggggactga     11040
     gagcaagggt cagggcctct ctttggggag gcctctcact gtaacaggac tggtcaggcc     11100
     tgagaggagg gcactgggtt ccctcttggg tcttgtcctt tagtcttggg gccctttccc     11160
     tccctgcacg atgagtggtg ggcacagggc acgggctgat gttgatggag tgatgggagg     11220
     gaactggcag gggctgggaa aagcaaggag ggaggaagaa aaaagtgggg gcctcatctt     11280
     ccctcagaga aagggcaaat ctggttttgg agcaactgaa gagagaaaag tccccaggga     11340
     ataaacacaa cactgcaccc agtggagcat ttacccattt ccctcttttc tccagagctc     11400
     gtgagcctgc aggtcctgga tcaacaccca gttgggacga gtgaccacag ggatgccaca     11460
     cagctcggat ttcagcctct gatgtcagct cttgggtcca ctggctccac tgagggcacc     11520
     tagactctac agccaggcgg c                                               11541
//