Dbfetch
ID OD916650; SV 1; linear; genomic DNA; STD; HUM; 11542 BP. XX AC OD916650; XX PR Project:PRJEB44240; XX DT 14-MAR-2023 (Rel. 144, Created) DT 15-MAR-2023 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens, MICA pseudogene, cell line DKMS-LSL_ID15814872_MICA_1, null DE allele MICA*008:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.; RT ; RL Submitted (21-APR-2021) to the INSDC. RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2, RL Saxony, 01069 Dresden, Germany XX DR MD5; 6ad41d1355638648a5b6b7c29bc45afe. XX FH Key Location/Qualifiers FH FT source 1..11542 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL_ID15814872_MICA_1" FT /db_xref="taxon:9606" FT exon 1..86 FT /gene="MICA" FT /allele="MICA*008:new" FT /number=1 FT CDS join(17..86,6928..7182,7457..7744,8332..8610,8710..8845, FT 11397..11524) FT /codon_start=1 FT /transl_table=1 FT /gene="MICA" FT /allele="MICA*008:new" FT /note="MHC Class I chain-related gene null allele" FT /pseudogene="allelic" FT intron 87..6927 FT /gene="MICA" FT /allele="MICA*008:new" FT /number=1 FT exon 6928..7182 FT /gene="MICA" FT /allele="MICA*008:new" FT /number=2 FT intron 7183..7456 FT /gene="MICA" FT /allele="MICA*008:new" FT /number=2 FT exon 7457..7744 FT /gene="MICA" FT /allele="MICA*008:new" FT /number=3 FT intron 7745..8331 FT /gene="MICA" FT /allele="MICA*008:new" FT /number=3 FT exon 8332..8610 FT /gene="MICA" FT /allele="MICA*008:new" FT /number=4 FT intron 8611..8709 FT /gene="MICA" FT /allele="MICA*008:new" FT /number=4 FT exon 8710..8845 FT /gene="MICA" FT /allele="MICA*008:new" FT /number=5 FT intron 8846..11396 FT /gene="MICA" FT /allele="MICA*008:new" FT /number=5 FT exon 11397..11542 FT /gene="MICA" FT /allele="MICA*008:new" FT /number=6 XX SQ Sequence 11542 BP; 2370 A; 2966 C; 2778 G; 3428 T; 0 other; tggcgacgtc ggggccatgg ggctgggccc ggtcttcctg cttctggctg gcatcttccc 60 ttttgcacct ccgggagctg ctgctggtga gtggcgttcc tggcggtcct cggcggagcg 120 ggagcagtgg gacgtttccg ggggtcgggt gggtagcggc gagcgctgtg cggtcagggc 180 ggggctcctg tgccctgtcg gtggcgcagg gagctggacg cggcccgtta ccgccacact 240 tcagccctgc ttccccgtca cttttcagtc ctcctcggga tcgcgcatca cctgcacttt 300 ctggtctcct cctgctcttt ctctcctcgc gtctcctccg cttcctctca cttttcggac 360 aaaccagtcc ttctgaggcc catgggttcc cgggctgcct ccggggctgc tcctgtgaat 420 ggcattcgag tgcccttcca gcgcggccac tgaagcagcc acaacccccg gtgctcgggg 480 cggctctcag gtccctgaag tcctgtcctc tcccggagcc gacgtgttct cagctcctgg 540 gccgcagctc ctggagtagg ggccctcctt tctcgggacc cggagctggt gcttcctgct 600 gctgtgggga ctgtgggggg tcctgactct caagctgagg ggttggagtc tgcaggctcc 660 gggcagagga ttcttcctgc gacttctctc atccccagct cattctcccc tcgcctctgg 720 ctccgagggt cctctcctct ctctcatccc acccctacta atgaccagtg atctaaggac 780 accagattcc ctctcacctc ctccctgccc atctcagggc ccgctgagtc cttttgccct 840 cccagctccc tgctacccct tcctgtgtgc tgttctctga tccatttcta gggtgtcctc 900 tgccctcatc ccctgtcccc gccaccgaag gtccctcctg caccccttat gggcctttcc 960 tacaagcagc cttcacccag tgctgcccct atgcctcccc gttcccaaat gtccctgact 1020 ctaactttct ggtgctgcct tttatccggg ggggtcttcc ctccatccca ctcccctcca 1080 gacccccaag gggaaccctg atgctaatgg cagttgggcc ttaggcaggg cgcagggcag 1140 cgcagatgcc ccctcccctc cagtgcagat gcctgttctg gaccctgcct cattgtggcc 1200 ccttccccac tccttcatcc tcagcctcac cctcttgagg accccaccct ccagcccaca 1260 ggtgctggac catccctccc tggtccctcc gcccctctcc accttgggac cttgtgctgc 1320 tcctatctct tgcccagctg ccttgggccc tcagcacgtt ctcatctttc agtgggaaag 1380 tgggagtgct ggagcatatg acagtgctga gcatctttcc caagccccac cctcccccag 1440 agcaccctcc cctcctgtcc tcaccctacc ccaagttctc ccacagtcac tcctgcccca 1500 tgctcatgcc gccctccagt tcttgctctg cccatctccc ctccccaacc cagacctaaa 1560 acaggctgtt gggccaactg ttccttgacc ttccttcttt tcttttggtt ccttgacccc 1620 agtgggctct tactccccac accgcatatc taaaatctgt tttgcctgct cttggggtgc 1680 cactgctccc cctccagcat tactcctttt ggcaggtcct tcctcaggct gagaatctcc 1740 ccctctacct tggttttctc tctctggcca gcacccccac tccttgcttt gtttttaatt 1800 tttaactttt gtttgggtac gtagtagata tatatgtata tatttatggg gtacatggga 1860 tattttgaca caggcctaca atatgtaata atcacatcag ggtaaatggg ttatatcaca 1920 acaagcattt atcctttctt tgtgctacaa acaatcccat tatgctcttt cagttatttt 1980 taaatgtaca ataaattatt gttgactgta ctcaccctgc tgtgctatct actagatctt 2040 attcattcta attatatttt tgtacccatt attaaccatc cctgctcccc cactccccac 2100 tacccttctc agcctctggt aatcatcatt ctattgtctc tccccatgag gtccattgtt 2160 ttaaattttg gctgccacaa ataagtgaga acatgcaaag tttgtctgtc tgggcctggg 2220 gcttatttca cttcacagga tgacctccag ttctttgcaa atgacacgat ggctgaatag 2280 ttctccacat acacatgtac accacatttt ctttatccat gcgtctgttg atggacactt 2340 agattgcttg cagatcttgg ctactttgaa tagtgctgca ataaacatgg aaaagtagat 2400 agctctttaa tataccgatt tcctttcttt ggagtatatg cctaacagtg ggagtgctgg 2460 agcatatgac agctctattg tatttttagt ttttggaaga acctccacat tgtttcccat 2520 agtggttgta ctagtttacg ttcccaccaa cagtgtacat cctcaccagc attccttatt 2580 tctacatcct cgccagcatt ccttattgcc tgtcttctgg ataaaagcca gtttatctgg 2640 ggtgggatgt tatctcgtag gagttttgat ttgccttcat ctgttgacga atgatgttga 2700 gcaccttttc atatacctgt ttgccattta tatgtcttct tttgagaaat gactattcag 2760 atcttttctc atttttaaat tggattatta tatttttttt cctatagttg ttcgagctcc 2820 ttatatgttt cagttactga tcctttgtca gatgaatagt ttgaaaatat tttctcccat 2880 tcttggatgg tctcttcatt ttgtttattg tttcctttgc tgtgcagaag cctttttact 2940 tgatatgatc ccatttatgc aattttactt tggttacctg tgcttgtggg gtattacttt 3000 aaaaatcttt gcccagtcca atatcctaga gagtttcccc aatgttttct tgtatagttt 3060 catagtttga ggtcatagat ttacatcttt aatccacttt gatttgattt ttgtatatgg 3120 tgaaagacag ggtctagttt cattcttctg cataaggata tctagtttcc ccagcaccat 3180 ttttgaagag actctccttt gccaatgtgt gttcttggta cctttgttgg aaatgagttt 3240 actgtagatg tatggaattg tttctgggtt ctctattctg tttcattggt ctgtgtgtct 3300 gtttttatgc cagtatcatg ctgttttggt tactgtagct ctgtagtata atttgaagtc 3360 agataatgtg attcctctag ttttgttcat tttgctcagg atagctttat ctattctggt 3420 ttttttgtgg ttccatatgc attttaggat tatttttatt atttctgtga agaatgtcat 3480 tagtgttttg atagggattg cattgaatct gtagattact ttgggtagta tggatatttc 3540 aacaaaactg attcttccaa tccatgaacg tggactatct tttccatttt ttgtgtcctt 3600 caattttttg catcagtgtt ttttgttttt ggtttttgag atggagtttc actcttgttg 3660 cccaggctag aatgcaaggg tgtgatcttg gctcaccgca acctccgcct cccaggttca 3720 agctattctt ctgcctcagc ctcccaagta gctgggatta caggcatgtg ccactgtgcc 3780 tggctaattt tctattttta ttagagatgg ggtttctcta tgttggccag gctagtcttg 3840 aactcctgac ctcaggtgat ccacctgcct cggcctccca aagtgctggg attacaggca 3900 tgagccacca cgcccagcca catcactgtt ttatagtttt tattggagag gtctttcact 3960 tcttcagtta ggtttattcc tcagtatttt attttatttg tagctattgt aaatgggatt 4020 cgtttcttga tttctttttc agattatttg ctgttagcac tgatttttgc atgttgattt 4080 tgtatcctgc aactttactg aatttgttct tcagttctaa tggttttttg gtggagtctt 4140 taggtttttc caaatatcag accacatgat ctgcaaacaa ggataatttg acttcttctt 4200 ttccagtttt aatgcccttt ctttctttct cctgtctgat tgctctagtt aggatctgca 4260 gtactgtgtt gcataactgt ggtaaaatta gtcatccttg tcttattcca gatcttagag 4320 aaaaggcttt cagttttccc ccattcagta tgttactagc tgtgagtttg tcatatatgg 4380 cttttattat attgaggtct gttccttgta tacttagttt tttgagagtt tttatcatga 4440 agggatgttg aatttatcaa atgctttttc agtatcaatt gaatgatact ggcttttgtc 4500 ctttattctg ttgatatgac gtattacatt gattgatttg tgtatgttaa atcatccttg 4560 catacctgga atacattcca cttgctcata aagaatgatc ttttttaatg tattgttgaa 4620 tgtggtttgc tagtatttcc ttgacgattt ttgcatcggt gttcatcagg gatataggcc 4680 tgtagttttc ttttttatga tgtgtctttg cctggttttt gtatcaggat attcctggct 4740 ttgtaaaatg agtttggaag tattccctcc tcctctattt ttcagaacag tttgaatagg 4800 actgacatat gttgttcttt aaaagtttaa ttgtggtaaa ttatacatta cataaatttt 4860 actgttttaa ccacttttaa gtgtatactc ggtggcatta gatacattca catttttgtg 4920 caacccaaaa ctctgtgccc attaatcggt aactccccat tcctccctac ctctggcccc 4980 tggtaaccac cattctactt tttgtttcta tgaatttgac cactctaggt acctcattta 5040 agcagaatca tgtaatgttt gtctttttgt ttctggctta tttcacttat aatatttttg 5100 aggttcggtg ggcacagtgg ctcacgcctg gatttccagc actttgggag gctgaagcag 5160 gtggatcacc tgagtttcgg agttcgaaac cagcctggcc aacatggtga aaccccatct 5220 ctactaaaaa taataaaagt tagccgggcg tgatggcggg tgcctgtaat cccaactact 5280 tgggaggctg aggcaggaga atcgcttgaa tccgggaagt ggaggttgca gtgagctgag 5340 atcaggccac tgcactccag cctgggcaac aagagtgaaa ttccatctcc aaaaaaaaaa 5400 aataaaacaa taataataat aatatttttg aggttcatcc aagttgtagt atgggtcaga 5460 atttcattcc ttttaaggat ggataatact cattatatgt atgtaccaca tcttggttat 5520 ccatccctca gacaatggac acttgggtta cttctacctt ttggatattg gcaaatattt 5580 catttccttt gggtatatat ttatttcctt tgggtatttc ttttgggtat atatccagaa 5640 atagaagcag tacacagggg cttcattttc tctgtctctt tgccaacctt gctctgtgtg 5700 tgtgtgtatg tgtgtgtgta ggtgtgtgat aacagccatc ctgattggtt tcaggtggca 5760 tctcattgtg gtttggattt gcattttcct aatgagtgct gatattgagc atcttttcat 5820 gtgtttgttg atcatttgta attttctttg aagaattggc catttaagtc ttttgcccat 5880 tttttccccc acatagcttc tcttatcaga tatatgactt gcaatattta tttcatttcg 5940 gggttgattg ctttttcact ctgattgtgc cctttgatgc atagatgttt tgaattttca 6000 tcagtctact ttgtcagttc tttctattct atctgtgctt tggtgtcata tccatgaaag 6060 cactgtcaaa tcctatgtca tgaacattat ccccaatgtt tgcttctaag aaatttttag 6120 gttttagttc ttgagtgtag agtttaggtc tttgattcat tttgagttaa tttttgtata 6180 tagtgcaaat taagggtcca attttatttt aacaccccct gcccccagaa ctatttgctg 6240 aaaagatcaa ctgactcttt gtcacctgct caccccagtg gacactagct gttccatcca 6300 attgctgtcc tggggccttg tcatgctact cttccacttt gaacccaagc ccacaccgtt 6360 cgttgctccc ctctgggata ctgaccccac tataaacttc tctggggcta caaccttcct 6420 accctttgtg cctcatgacc accccctccc ttgtccccgc catgcccatg atgagtctct 6480 tctcgaggca gctccccttg cctccatctc accctcagcc tatgcaccac agccacactg 6540 gacatgggtc cctctgagcc tgagtccctt cccattccca ccatcccctc tggcaagacc 6600 ttccttccac caccttcatg ctcctccctt gcccctgcag ggcagcctct ccccttggcc 6660 cctattccct tagggggctt gtggccaccc agtccttgca cctggcctac aagtttgcca 6720 tcttcattcc cccttcttct gttcatcagc cccctcctct atcctcccac cctcacagtt 6780 ttctttgtat atgaaatcct cgttcttgtc cctttgcccg tgtgcatttc ctgccccagg 6840 aaggttggga cagcagacct gtgtgttaaa catcaatgtg aagttacttc caggaagaag 6900 tttcacctgt gatttcctct tccccagagc cccacagtct tcgttataac ctcacggtgc 6960 tgtcctggga tggatctgtg cagtcagggt ttcttgctga ggtacatctg gatggtcagc 7020 ccttcctgcg ctatgacagg cagaaatgca gggcaaagcc ccagggacag tgggcagaag 7080 atgtcctggg aaataagaca tgggacagag agaccaggga cttgacaggg aacggaaagg 7140 acctcaggat gaccctggct catatcaagg accagaaaga aggtgagagt cggcaggggc 7200 aagagtgact ggagaggcct tttccagaaa agttaggggc agagagcagg gacctgtctc 7260 ttcccactgg atctggctca ggctgggggt gaggaatggg ggtcagtgga actcagcagg 7320 gaggtgagcc ggcactcagc ccacacaggg aggcatggag gagggccagg gaggcatacc 7380 ccctgggctg agttcctcac ttgggtggaa aggtgatggg ttcgggaatg gagaagtcac 7440 tgctgggtgg gggcaggctt gcattccctc caggagatta gggtctgtga gatccatgaa 7500 gacaacagca ccaggagctc ccagcatttc tactacgatg gggagctctt cctctcccaa 7560 aacctggaga ctgaggaatg gacagtgccc cagtccccca gagctcagac cttggccatg 7620 aacgtcagga atttcttgaa ggaagatgcc atgaagacca agacacacta tcacgctatg 7680 catgcagact gcctgcagga actacggcga tatctagaat ccggcgtagt cctgaggaga 7740 acaggtaccg acgctggcca ggggctctcc tctccctcca attctgctag agttgcctca 7800 cctcccagat gtgtccaggg aaaccctccc tgtgctatgg atgaaggcat ttcctgttgg 7860 cacatcgtgt cctgattttc ctctattgtt agagccactg gataaagaca gagggtcagg 7920 gactggacca tccagtgttg taatcagggc aagtagagga ccctccgaca gaatcctgag 7980 cctgtggtgg gtgtcaggca ggagaggaag ccttcagggc cagggctgcc ccctctgcct 8040 cccagcctgc ccatcctgga gagttccctc ctggccccac aacccaggag tccacccctg 8100 acatccccct cctcagcatc aatgtgggga tcccagagcc tgaggccaca gtcccaaggc 8160 ccatcctcct gccagcctgg aagaactggg ccccagagtg aggacagact tgcaggtcag 8220 gggtcccgga gggcttcagc cagagtgaga acagtgaaga gaaacagccc tgttcctctc 8280 ccctccttag aggggagcag ggcttcactg gctctgccct ttcttctcca gtgcccccca 8340 tggtgaatgt cacccgcagc gaggcctcag agggcaacat caccgtgaca tgcagggctt 8400 ccagcttcta tccccggaat atcatactga cctggcgtca ggatggggta tctttgagcc 8460 acgacaccca gcagtggggg gatgtcctgc ctgatgggaa tggaacctac cagacctggg 8520 tggccaccag gatttgccga ggagaggagc agaggttcac ctgctacatg gaacacagcg 8580 ggaatcacag cactcaccct gtgccctctg gtgagcctag ggtgaccctg gagagggtca 8640 ggccagggta gggacagcag ggatggctgt ggctctctgc ccagtgtata acaagtccct 8700 ttttttcagg gaaagtgctg gtgcttcaga gtcattggca gacattccat gtttctgctg 8760 ttgctgctgg ctgctgctat ttttgttatt attattttct atgtccgttg ttgtaagaag 8820 aaaacatcag ctgcagaggg tccaggtgag aaaagcgggc agtttctgga gatggtaagg 8880 cccctgtctg ggcagtaggg tcccctcatt gctcctgcaa agataggcat gttggtgaca 8940 aggcttccgt aacaggggat gaaagttggg gaatttggga agggaatggg ggcagcatct 9000 ccatctacac ccataagtgc tgcccaagca agggtcaaac gcccagctgt ggcatcctcc 9060 tgctgcaggt gaggagtggg cagcagggag ggctgcggcg cctgctctgt ccccatcccg 9120 gtctctgtgt ctcttgaact cactagggcg catccaggtg gggtgagctg ggaatcacgt 9180 gctgaatgct aagggcctgg atgatcacgg cctcagaggg agcaaatagt aaaggcagct 9240 gtgatctggg gagggccaga aactggagag gaatctgagg agaggcggtg cccctattcc 9300 cttcctctct gcatccccct cccctgtttc tccagccatc ggggcggaca ccgagaaaaa 9360 gacctatgag gcccagcctg ggggccctgc ctgtgtagcc ctttggagac cccttgtaac 9420 agggagggtc ctgagcacac atggccatct ctgtccactt tgcagctccc catgcacctc 9480 ctccaggagc tttcttgggg ttgtcgtgtc ctctgcacca ttcgaggccc tactctttcc 9540 aggttcccac ggcctggcct ccctgagttt cttgcagatg acatggatga gtagataagc 9600 agatgtccct gggccatttg aggagtgggg cccagcccct catcagggca gctgtggtcc 9660 ctgttttcat cctacctccg agtgttttct tctccagtcc ctgagggaca cagtcctcag 9720 ggcccatgtt tttggggatt taatctgtgc tctgtggcct caccttgccc tccctgagcc 9780 aatttccctt tctaaaggtg gtcactgcct ggtaagtttg gagtaaggga cggtcagaat 9840 catttcccct acagtcaggt tgtttgatgg gggatgaaaa gagacagcag gaagttttgt 9900 gtttctgcaa agacagaagc agttcaggcg acagtaagag gctggggtgt ccaggaggat 9960 gtgtctggca gtagggtcgc tggtttctca tccttgaacc taattgcact gtcaatcggc 10020 ccctcaggcc tgagcagatg ggaaggtttg tcccctgccc tgcagcaaga gggccctgtc 10080 caggaggcac ccacaacagg ggcagtgcag gtctgtggtc actcctgctc tcacctgtgg 10140 cgtctcccgt agagggattg tcagttctgg ttccctgtgg gcaggaatgg tttcctcata 10200 ggtcactgga gttttggcca ggaaaagagt atgaagttca tgtgccagtt tctcaaaatt 10260 cctgctttca atgttgatgt ccagtaaaga tattcgtaat ttcagctcta taatcttaat 10320 aggatttcct ctaatattgt gaagcatatt atatgaaaca ggaacacaaa tttctcaaaa 10380 ttcctgcgat gtccaataaa gattttcata atttcagctc tgcaatctta ataggatttc 10440 ctaatactgt aaagcatatt aaatgaaaca ggaactcaaa tttggagccc cctctccagg 10500 aggttctgtg tggagatggt ggctgtggca gtggcagttc ccaggtgcag agggtgggca 10560 gaggcagcct caggctaagg ggtctcccct actccacatg gagaaaatcc cttgtaggtt 10620 gcaagggcag tggccgggtg gaatccctgc tagggacaga gcaggaaggc ctcgcagcct 10680 caccaagcag cagccctggg gtggagctgc gtttccaggg ttaagcggac caggcaggag 10740 tagcggttac tcaagagcag gtcacaggct tgggttgtga gggtcaggag aggccaggcc 10800 tcctcgagca aggtgggggt cccagggtca ggtcaggtgc agatcctgtg gcagccacgt 10860 ctttccatgc tgggcctgct gggcccccca ggcttcctga tggggtcccc agttaggagc 10920 tgcctgctca gggctgggag gggaggagca ctgagctgca gatagagggc agagcccaca 10980 gtgggcaggg cctgccctgg tgtgtaggtg cctctgcagg agaggagggc ctggggactg 11040 agagcaaggg tcagggcctc tctttgggga ggcctctcac tgtaacagga ctggtcaggc 11100 ctgagaggag ggcactgggt tccctcttgg gtcttgtcct ttagtcttgg ggccctttcc 11160 ctccctgcac gatgagtggt gggcacaggg cacgggctga tgttgatgga gtgatgggag 11220 ggaactggca ggggctggga aaagcaagga gggaggaaga aaaaagtggg ggcctcatct 11280 tccctcagag aaagggcaaa tctggttttg gagcaactga agagtgaaaa gtccccaggg 11340 aataaacaca acactgcacc cagtggagca tttacccatt tccctctttt ctccagagct 11400 cgtgagcctg caggtcctgg atcaacaccc agttgggacg agtgaccaca gggatgccac 11460 acagctcgga tttcagcctc tgatgtcagc tcttgggtcc actggctcca ctgagggcac 11520 ctagactcta cagccaggcg gc 11542 //