Dbfetch
ID MZ398109; SV 1; linear; genomic DNA; STD; HUM; 3147 BP. XX AC MZ398109; XX DT 28-JUN-2021 (Rel. 144, Created) DT 28-JUN-2021 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens clone HLA-UERJ-C11263 MHC class I protein (HLA-A) gene, DE HLA-A-A*29:NEW allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3147 RA Vianna R., Porto L.C.; RT ; RL Submitted (15-JUN-2021) to the INSDC. RL Laboratorio de Histocompatibilidade e Criopreservacao - HLA/UERJ, Rio de RL Janeiro State University, Av Marechal Rondon 381, Rio de Janeiro, RJ RL 20950-003, Brazil XX DR MD5; fdabf87cbb80340b65fb785d4272addf. XX CC ##Assembly-Data-START## CC Assembly Method :: Omixon HLA Twin v. 4.4.1; GenDx NGSengine CC v. 2.21 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3147 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="HLA-UERJ-C11263" FT /db_xref="taxon:9606" FT gene <1..>3147 FT /gene="HLA-A" FT /allele="A*29:NEW" FT exon <1..205 FT /gene="HLA-A" FT /allele="A*29:NEW" FT /number=1 FT 5'UTR <1..132 FT /gene="HLA-A" FT /allele="A*29:NEW" FT CDS join(133..205,335..604,846..1121,1722..1997,2097..2213, FT 2654..2686,2829..2876,3046..3050) FT /codon_start=1 FT /gene="HLA-A" FT /allele="A*29:NEW" FT /product="MHC class I protein" FT /protein_id="QWV59134.1" FT /translation="MAVMAPRTLLLLLLGALALTQTWAGSHSMRYFTTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSNAASQRMEPRAPWIEQEGPEYWDLQTRNVKAQSQTDRANLGT FT LRGYYNQSEAGSHTIQMMYGCDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMA FT AQITQRKWEAARVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWASVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVFAGAVVAAVRWRRKSSDRK FT GGSYSQAASSDSAQGSDMSLTACKV" FT exon 335..604 FT /gene="HLA-A" FT /allele="A*29:NEW" FT /number=2 FT exon 846..1121 FT /gene="HLA-A" FT /allele="A*29:NEW" FT /number=3 FT exon 1722..1997 FT /gene="HLA-A" FT /allele="A*29:NEW" FT /number=4 FT exon 2097..2213 FT /gene="HLA-A" FT /allele="A*29:NEW" FT /number=5 FT exon 2654..2686 FT /gene="HLA-A" FT /allele="A*29:NEW" FT /number=6 FT exon 2829..2876 FT /gene="HLA-A" FT /allele="A*29:NEW" FT /number=7 FT exon 3046..>3147 FT /gene="HLA-A" FT /allele="A*29:NEW" FT /number=8 FT 3'UTR 3051..>3147 FT /gene="HLA-A" FT /allele="A*29:NEW" XX SQ Sequence 3147 BP; 599 A; 902 C; 974 G; 672 T; 0 other; ctcacgacgc ggacccagtt ctcactccca ttgggtgtcg ggtttccaga gaagccaatc 60 agtgtcgtcg cggtcgcggt tctaaagtcc gcacgcaccc accgggactc agattctccc 120 cagacgccga ggatggccgt catggcgccc cgaaccctcc tcctgctact cttgggggcc 180 ctggccctga cccagacctg ggcgggtgag tgcggggtcg tggggaaacc gcctctgcgg 240 ggagaagcaa ggggcccgcc cggcggggac gcaggacccg ggtagccgcg ccgggaggag 300 ggtcgggtgg gtctcagcca ctcctcgccc ccaggctccc actccatgag gtatttcacc 360 acatccgtgt cccggcccgg ccgcggggag ccccgcttca tcgccgtggg ctacgtggac 420 gacacgcagt tcgtgcggtt tgacagcaac gccgcgagcc agaggatgga gccgcgggca 480 ccgtggatag agcaggaggg gccggagtat tgggacctgc agacacggaa tgtgaaggcc 540 cagtcacaga ctgaccgagc gaacctgggg accctgcgcg gctactacaa ccagagcgag 600 gccggtgagt gaccccggcc cggggcgcag gtcacgacct ctcatccccc acggacgggc 660 cgggtcgccc acagtctccg ggtccgagat ccaccccgaa gccgcgggac cccgagaccc 720 ttgccccggg agaggcccag gcgcctttac ccggtttcat tttcagttta ggccaaaaat 780 ccccccgggt tggtcggggc cggacggggc tcgggggact gggctgaccg tggggtcggg 840 gccaggttct cacaccatcc agatgatgta tggctgcgac gtggggtcgg acgggcgctt 900 cctccgcggg taccggcagg acgcctacga cggcaaggat tacatcgcct tgaacgagga 960 cctgcgctct tggaccgcgg cggacatggc ggctcagatc acccagcgca agtgggaggc 1020 ggcccgtgtg gcggagcagt tgagagccta cctggagggc acgtgcgtgg agtggctccg 1080 cagatacctg gagaacggga aggagacgct gcagcgcacg ggtaccgggg gccacggggc 1140 gcctccctga tcgcctgtag atctcccggg ctggcctccc acaaggaggg gagacaattg 1200 ggaccaacac tagaatatcg ccctccctct ggtcctgagg gagaggaatc ctcctgggtt 1260 tccagatcct gtaccagaga gtgactctga ggttccgccc tgctctctga cacaattaag 1320 ggataaaatc tctgaaggaa tgacgggaag acgatccctc gaatactgat gagtggttcc 1380 ctttgacaca caccggcagc agccttgggc ccgtgacttt tcctctcagg ccttgttctc 1440 tgcttcacac tcaatgtgtg tgggggtctg agtccagcac ttctgagtcc ctcagcctcc 1500 actcaggtca ggaccagaag tcgctgttcc ctcttcaggg actagaattt tccacggaat 1560 aggagattat cccaggtgcc tgtgtccagg ctggtgtctg ggttctgtgc tcccttcccc 1620 atcccaggtg tcctgtccat tctcaagata gccacatgtg tgctggagga gtgtcccatg 1680 acagatgcaa aatgcctgaa tgttctgact cttcctgaca gacgccccca agacgcatat 1740 gactcaccac gctgtctctg accatgaggc caccctgagg tgctgggccc tgagcttcta 1800 ccctgcggag atcacactga cctggcagcg ggatggggag gaccagaccc aggacacgga 1860 gcttgtggag accaggcctg caggggatgg aaccttccag aagtgggcgt ctgtggtggt 1920 gccttctgga caggagcaga gatacacctg ccatgtgcag catgagggtc tgcccaagcc 1980 cctcaccctg agatggggta aggagggaga tgggggtgtc atgtctttta gggaaagcag 2040 gagcctctct gacctttagc agggtcaggg cccctcacct tcccctcttt tcccagagcc 2100 gtcttcccag cccaccatcc ccatcgtggg catcattgct ggcctagttc tctttggagc 2160 tgtgttcgct ggagctgtgg tcgctgctgt gaggtggagg aggaagagct caggtggggt 2220 gaagggatga agggtgggtc tgagatttct tgtctcactg agggttccaa gacccaggta 2280 gaagtgtgcc ctgcctcgtt actgggaagc accatccaca attatgggcc tacccagcct 2340 gggccctgtg tgccagcact tactcttttg taaagcacct gttaaaatga aggacagatt 2400 tatcaccttg attacggcgg tgatgggacc tgatcccagc agtcacaagt cacaggggaa 2460 ggtccctgag gaccttcagg agggcggttg gtccaggacc cacacctgct ttcttcatgt 2520 ttcctgatcc cgccctgggt ctgcagtcac acatttctgg aaacttctct gaggtccaag 2580 acttggaggt tcctctagga ccttaaggcc ctggctcctt tctggtatct cacaggacat 2640 tttcttccca cagatagaaa aggagggagc tactctcagg ctgcaagtaa gtatgaagga 2700 ggctgatgcc tgaggtcctt gggatattgt gtttgggagc ccgtggggga gctcacccac 2760 cccacaattc ctcctctagc cacatcttct gtgggatctg accaggttct gtttttgtcc 2820 taccccaggc agtgacagtg cccagggctc tgatatgtct ctcacagctt gtaaaggtga 2880 gagcctggag ggcctgatgt gtgttgggtg ttgggcggaa cagtggacgc agctgtgcta 2940 tggggtttct ttgcattgga tgtattgagc atgcgatggg ctgtttaaag tgtgactcct 3000 cactgtgaca gatacgaatt tgttcatgaa tatttttttc tatagtgtga gacagctgcc 3060 ttgtgtggga ctgagaggca agatttgttc ctgcccttcc ctttgtgact tgaagaaccc 3120 tgactttgtt tctgcaaagg cacctgc 3147 //