Dbfetch
ID MZ374133; SV 1; linear; genomic DNA; STD; HUM; 3369 BP. XX AC MZ374133; XX DT 13-JUL-2021 (Rel. 144, Created) DT 13-JUL-2021 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens isolate 1332269 MHC class I antigen (HLA-C) gene, DE HLA-C*17:01:01var allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3369 RA Gomez-Massa E.; RT ; RL Submitted (08-JUN-2021) to the INSDC. RL Histocompatibility and Immunogenetics Laboratory, Blood and Tissue Bank, RL Edifici Frederic Duran i Jorda. Passeig del Taulat 106-116, Barcelona RL 08005, Spain XX DR MD5; 521dbf326d2f29174304fd0e7a7edf27. XX CC ##Assembly-Data-START## CC Assembly Method :: GenDx (NGS engine) v. IMGT 3.43.0 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3369 FT /organism="Homo sapiens" FT /isolate="1332269" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <294..>3208 FT /gene="HLA-C" FT /allele="HLA-C*17:01:01var" FT mRNA join(<294..366,497..766,1013..1288,1876..2151,2276..2413, FT 2852..2884,2992..3039,3204..>3208) FT /gene="HLA-C" FT /allele="HLA-C*17:01:01var" FT /product="MHC class I antigen" FT CDS join(294..366,497..766,1013..1288,1876..2151,2276..2413, FT 2852..2884,2992..3039,3204..3208) FT /codon_start=1 FT /gene="HLA-C" FT /allele="HLA-C*17:01:01var" FT /product="MHC class I antigen" FT /protein_id="QXH29462.1" FT /translation="MRVMAPQALLLLLSGALALIETWAGSHSMRYFYTAVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVNLRK FT LRGYYNQSEAGSHTIQRMYGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTA FT AQISQRKLEAAREAEQLRAYLEGECVEWLRGYLENGKETLQRAERPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY FT TCHVQHEGLQEPCTLRWKPSSQPTIPNLGIVSGPAVLAVLAVLAVLAVLGAVVAAVIHR FT RKSSGGKGGSCSQAASSNSAQGSDESLIACKA" XX SQ Sequence 3369 BP; 627 A; 985 C; 1052 G; 705 T; 0 other; aggagaagag ggatcaggac gaagtcccag gtcccgggcg gggctctctg ggtctcaagc 60 tcccagggcc gtgtctgcat tggggaggcg cagcgttggg gattccccac tcccactccc 120 ctgagtttca cttcttctcc caacctgcgt cgggtccttc ttcctgaata ctcatgacgc 180 gtccccaatt cccactccca ttgggtgtcg ggttctagag aagccaatca gcgtctacgc 240 agtcccggtt ctgaagtcac ccacccggac tcagattctc cccagacgcc gagatgcggg 300 tcatggcgcc ccaagccctc ctcctgctgc tctcgggagc cctggccctg atcgagacct 360 gggccggtga gtgcggggtt gggagggaaa cggcctctgc ggagaggagc gaggggcccg 420 cccggcgagg gcgcaggacc cggggagccg cgcagggagg agggtcgggc gggtctcagc 480 ccctcctcgc ccccaggctc ccactccatg aggtatttct acaccgccgt gtcccggccc 540 ggccgcggag agccccgctt catcgcagtg ggctacgtgg acgacacgca gttcgtgcgg 600 ttcgacagcg acgccgcgag tccgagaggg gagccgcggg cgccgtgggt ggagcaggag 660 gggccggagt attgggaccg ggagacacag aagtacaagc gccaggcaca ggctgaccga 720 gtgaacctgc ggaaactgcg cggctactac aaccagagcg aggccggtga gtgaccccag 780 cccggggcgc aggtcacgac ccctccccat cccccacgga cggcccgggt cgccccgagt 840 ctcccggtct gagatcctcc ccgaggctgc ggaacccgcc cagaccctcg accggagaga 900 gccctagtcg cctttacccg gtttcatttt cagtttaggc caaaatcccc gcgggttggt 960 cggggctggg gcggggctcg ggggacgggg ctgaccacgg gggcggggcc aggttctcac 1020 accatccaga ggatgtatgg ctgcgacctg gggcccgacg ggcgcctcct ccgcgggtat 1080 aaccagttcg cctacgacgg caaggattac atcgccctga acgaggacct gcgctcctgg 1140 accgcggcgg acacggcggc tcagatctcc cagcgcaagt tggaggcggc ccgtgaggcg 1200 gagcagctga gagcctacct ggagggcgag tgcgtggagt ggctccgcgg atacctggag 1260 aacgggaagg agacgctgca gcgcgcgggt accaggggca gtggggagcc ttccccatct 1320 cctatagatc tcccgggatg gcctcccacg aggaggggag gaaaatggga tcagcgctag 1380 aatatcgccc tcccttgaat ggagaatggg atgagttttc ccgagtttcc tctgagggcc 1440 ccgtctgctc tctaggacaa ttaagggatg aagtccctga ggaaatggag gggaagacag 1500 tccctggaat actgatcagg ggtccccttt gaccactttg accactgcgg cagctgtggt 1560 caggctgctg acctttctct caggccttgt tctctgcctc acactcaatg tgtctgaagg 1620 tttgattcca gcttttctga gtccttcggc ctccactcag gtcaggacca gaagtcgctg 1680 ttcctccctc agagactaga actttccaaa gaataggaga ttatcccagg tccctgtgtc 1740 caggctggcg tctgggttct gtgccccctt ccctacccca ggtgtcctgt ccattctcag 1800 gatggtcaca tgggcgctgc tggagtgtcg caagagagat acaaagtgtc tgaattttct 1860 gactcttccc gtcagaacgc ccaaagacac acgtgaccca ccatcccgtc tctgaccatg 1920 aggccaccct gaggtgctgg gccctgggct tctaccctgc ggagatcaca ctgacctggc 1980 agcgggatgg ggaggaccaa actcaggaca ccgagcttgt ggagaccagg ccagcaggag 2040 atggaacctt ccagaagtgg gcagctgtgg tggtgccttc tggacaagaa cagagataca 2100 cgtgccatgt gcagcacgag gggctgcagg agccctgcac cctgagatgg agtaaggagg 2160 gggatgaggg gtcatgtgtc ttctcaggga aagcagaagt ccttctggag cccttcagcc 2220 gggtcagggc tgaggcttgg gtgtaagggc ccctcacctt cccctccttt cccagagccg 2280 tcttcccagc ccaccatccc caacttgggc atcgtttctg gcccagctgt cctggctgtc 2340 ctggctgtcc tggctgtcct agctgtccta ggagctgtgg tcgctgctgt gatacatagg 2400 aggaagagct caggtaggga aggggtgagg agtggggtct gggttttctt gtcccactgg 2460 gagtttcaag ccccaggtag aagtgtgccc cacctcgtta ctggaagcac catccacacc 2520 tgggccatcc cagcctggga ccctgtgtgc cagcacttac tctgttgtga agcacatgac 2580 aacgaaggac agatgtatca ccttgatgat tatggtgttg gggtcctgat tccagcattc 2640 gtgagtcagg ggaaggtccc tgctaaggac agaccttagg agggcagttg ctccagaacc 2700 cacagctgct ttccccgtgt ttcctgatcc tgccctgggt ctgcagtcat agttctggaa 2760 acttctcttg ggtccaagac taggaggttc ccctaagatc gcatggccct gcctcctccc 2820 tgtcccctca cagggcattt tcttcccaca ggtggaaaag gagggagctg ctctcaggct 2880 gcgtgtaagt gatggcggtg ggcgtgtgga ggagctcacc taccccataa ttcctcttgt 2940 cccacatctc ctgcgggctc tgaccaggtc tttttttttg ttctacccca gccagcaaca 3000 gtgcccaggg ctctgatgag tctctcatcg cttgtaaagg tgagattctg gggagctgaa 3060 gtggtcgggg gtggggcaga gggaaaaggc ctgggtaatg gggattcttt gattgggacg 3120 tttcgagtgt gtggtggact gttcagagtg tcatcactta ccatgactga cctgaatttg 3180 ttcatgacta ttgtgttctg tagcctgaga cagctgcctg tgtgggactg agatgcagga 3240 tttcttcaca cctctccttt gtgacttcaa gagcctctgg catctctttc tgcaaaggca 3300 tctgaatgtg tctgcgttcc tgttagcata atatgaggag ttggagagac agctcacccc 3360 cgtgtccac 3369 //