Dbfetch
ID MZ374113; SV 1; linear; genomic DNA; STD; HUM; 3350 BP. XX AC MZ374113; XX DT 13-JUL-2021 (Rel. 144, Created) DT 13-JUL-2021 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens isolate 1324007 MHC class I antigen (HLA-C) gene, DE HLA-C*16:01:01var2 allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3350 RA Gomez-Massa E.; RT ; RL Submitted (07-JUN-2021) to the INSDC. RL Histocompatibility and Immunogenetics Laboratory, Blood and Tissue Bank, RL Edifici Frederic Duran i Jorda. Passeig del Taulat 106-116, Barcelona RL 08005, Spain XX DR MD5; fcd8d5deadb082cac4e96c16932e7dd4. XX CC ##Assembly-Data-START## CC Assembly Method :: GenDx (NGS engine) v. IMGT 3.43.0 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3350 FT /organism="Homo sapiens" FT /isolate="1324007" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <295..>3189 FT /gene="HLA-C" FT /allele="HLA-C*16:01:01var2" FT mRNA join(<295..367,498..767,1014..1289,1877..2152,2274..2393, FT 2833..2865,2973..3020,3185..>3189) FT /gene="HLA-C" FT /allele="HLA-C*16:01:01var2" FT /product="MHC class I antigen" FT CDS join(295..367,498..767,1014..1289,1877..2152,2274..2393, FT 2833..2865,2973..3020,3185..3189) FT /codon_start=1 FT /gene="HLA-C" FT /allele="HLA-C*16:01:01var2" FT /product="MHC class I antigen" FT /protein_id="QXH29454.1" FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMRYFYTAVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN FT LRGYYNQSEAGSHTLQWMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAARAAEQQRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHLVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" XX SQ Sequence 3350 BP; 625 A; 981 C; 1047 G; 697 T; 0 other; aggagaagag ggatcaggac gaagtcccag gtcccgggcg gggctctcag ggtctcaggc 60 tccaagggcc gtgtctgcac tggggaggcg ccgcgttgag gattctccac tcccctgagt 120 ttcacttctt ctcccaacct gcgtcgggtc cttcttcctg aatactcatg acgcgtcccc 180 aattcccact cccattgggt gtcgggttct agagaagcca atcagcgtct ccgcagtccc 240 ggttctaaag tccccagtca cccacccgga ctcggattct ccccagacgc cgagatgcgg 300 gtcatggcgc cccgaaccct catcctgctg ctctcgggag ccctggccct gaccgagacc 360 tgggcctgtg agtgcggggt tgggagggaa acggcctctg cggagaggag cgaggggccc 420 gcccggcgag ggcgcaggac ccggggagcc gcgcagggag gagggtcggg cgggtctcag 480 cccctcctcg cccccaggct cccactccat gaggtatttc tacaccgccg tgtcccggcc 540 cggccgcgga gagccccgct tcatcgcagt gggctacgtg gacgacacgc agttcgtgcg 600 gttcgacagc gacgccgcga gtccaagagg ggagccgcgg gcgccgtggg tggagcagga 660 ggggccggag tattgggacc gggagacaca gaagtacaag cgccaggcac agactgaccg 720 agtgagcctg cggaacctgc gcggctacta caaccagagc gaggccggtg agtgaccccg 780 gcccggggcg caggtcacga cccctcccca tcccccacgg acggcccggg tcgccccgag 840 tctcccggtc tgagatccac cccgaggctg cggaacccgc ccagaccctc ggccggagag 900 agccccagtc acctttaccc ggtttcattt tcagtttagg ccaaaatccc cgcgggttgg 960 tcggggctgg ggcggggctc gcgggacggg gctgaccacg ggggcggggc cagggtctca 1020 caccctccag tggatgtatg gctgcgacct ggggcccgac gggcgcctcc tccgcgggta 1080 tgaccagtcc gcctacgacg gcaaggatta catcgccctg aacgaggacc tgcgctcctg 1140 gaccgccgcg gacacggcgg ctcagatcac ccagcgcaag tgggaggcgg cccgtgcggc 1200 ggagcagcag agagcctacc tggagggcac gtgcgtggag tggctccgca gatacctgga 1260 gaacgggaag gagacgctgc agcgcgcggg taccaggggc agtggggagc cttccccatc 1320 tcctgtagat ctcccgggat ggcctcccac gaggagggga ggaaaatggg atcagcgcta 1380 gaatatcgcc ctcccttgaa tggagaatgg gatgagtttt cctgagtttc ctctgagggc 1440 cccctctgct ctctaggaca attaagggat gaagtccttg aggaaatgga ggggaagaca 1500 gtccctggaa tactgatcag gggtcccctt tgaccacttt gaccactgca gcagctgtgg 1560 tcaggctgct gacctttctc tcaggccttg ttctctgcct catgctcaat gtgtttgaag 1620 gtttgattcc agcttttctg agttcttcag cctccactca ggtcaggacc agaagtcgct 1680 gttcctccct cagagactag aactttccaa tgaataggag attatcccag gtgcctgtgt 1740 ccaggctggc gtctgggttc tgtgccccct tccccacccc aggtgtcctg tccattctca 1800 ggatggtcac atgggcgctg ttggagtgtc gcaagagaga tacaaagtgt ctgaattttc 1860 tgactcttcc cgtcagaaca cccaaagaca cacgtgaccc accatctcgt ctctgaccat 1920 gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac actgacctgg 1980 cagcgggatg gcgaggacca aactcaggac accgagcttg tggagaccag gccagcagga 2040 gatggaacct tccagaagtg ggcagctgtg gtggtgcctt ctggagaaga gcagagatac 2100 acgtgccatg tgcagcacga ggggctgccg gagcccctca ccctgagatg gggtaaggag 2160 ggggatgagg ggtcatgtgt cttctcaggg aaagcagaag tcctggagcc cttcagccgg 2220 gtcagggctg aggcttgggg gtcaaggccc ctcaccttcc cctcctttcc cagagccatc 2280 ttcccagccc accatcccca tcgtgggcat cgttgctggc ctggctgtcc tggctgtcct 2340 agctgtccta ggagctgtgg tggctgttgt tatgtgtagg aggaagagct caggtaggga 2400 aggggtgagg agtggggtct gggttttctt gtcccactgg gagtttcaag ccccaggtag 2460 aagtgtgccc cacctcgtta ctggaagcac catccacaca tgggccatcc cagcctggga 2520 ccctgtgtgc cagcacttac tctgttgtga agcacatgac aatgaaggac agatgtatca 2580 ccttgatgat tatggtgttg gggtccttga ttccagcatt catgagtcag gggaaggtcc 2640 ctgctaagga cagaccttag gagggcagtt gctccagaac ccacagctgc tttccctgtg 2700 tttcctgatc ctgccctggg tctgcagtca tagttctgga aacttctctt gggtccaaga 2760 ctaggaggtt cccctaagat cgcatggccc tgcctcctcc ctgtcccctc acagggcatt 2820 ttcttcccac aggtggaaaa ggagggagct gctctcaggc tgcgtgtaag tgatggcagt 2880 gggcgtgtgg aggagctcac ccaccccata attcctcttg tcccacatct cctgcgggct 2940 ctgaccaggt cttttttttt gttctacccc agccagcaac agtgcccagg gctctgatga 3000 gtctctcatc gcttgtaaag gtgagattct ggggagctga agtggtcggg ggtggggcag 3060 agggaaaagg cctaggtaat ggggatcctt tgattgggac gtttcgaatg tgtggtgagc 3120 tgttcagagt gtcatcactt accatgactg acctgaattt gttcatgact attgtgttct 3180 gtagcctgag acagctgcct gtgtgggact gagatgcagg atttcttcac acctctcctt 3240 tgtgacttca agagcctctg gcatctcttt ctgcaaaggc atctgaatgc gtctgcgttc 3300 ctgttagcat aatgtgagga ggtggagaga cagcccaccc ccgtgtccac 3350 //