Dbfetch
ID MZ299031; SV 1; linear; genomic DNA; STD; HUM; 5076 BP. XX AC MZ299031; XX DT 14-JUN-2021 (Rel. 144, Created) DT 14-JUN-2021 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens MHC class II antigen (HLA-DQB1) gene, HLA-DQB1*06:01 allele, DE partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5076 RA Kwok J., Cheung S., Ho J., Chan Y.S.; RT ; RL Submitted (27-MAY-2021) to the INSDC. RL Division of Transplantation and Immunogenetics, Department of Pathology, RL Queen Mary Hospital, 102 Pokfulam Road, Pokfulam, Hong Kong, Hksar XX DR MD5; 4cfb1f6cd528908b5e2decbbb4be8053. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 2.20.0; TypeStream Visual v. CC 2.0.1 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..5076 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <221..>5052 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*06:01" FT mRNA join(<221..490,3024..3305,3811..3921,4405..4428, FT 5039..>5052) FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*06:01" FT /product="MHC class II antigen" FT CDS join(<221..490,3024..3305,3811..3921,4405..4428,5039..5052) FT /codon_start=3 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*06:01" FT /product="MHC class II antigen" FT /protein_id="QWE89940.1" FT /translation="DFVLQFKAMCYFTNGTERVRYVTRYIYNREEDVRFDSDVGVYRAV FT TPQGRPDAEYWNSQKDILERTRAELDTVCRHNYEVAFRGILQRRVEPTVTISPSRTEAL FT NHHNLLVCSVTDFYPGQIKVQWFRNDQEETAGVVSTPLIRNGDWTFQILVMLEMTPQHG FT DVYTCHVEHPSLQSPITVEWRAQSESAQNKMLSGIGGFVLGLIFLGLGLIIRQRSQKGP FT QGPPPAGLLH" XX SQ Sequence 5076 BP; 1285 A; 1176 C; 1237 G; 1378 T; 0 other; ctgtaggaag gcagattccc gaagccccca gagagggcgg gcagggctga gcagagccgc 60 cgggaggatc ccagttctgg agcgccagac acgggcaggc gggaactgga ggtcgcgcgg 120 gcggttccac agctccgggc cgggtcaggg cggcggctgc gggggcggcc gggctagggc 180 caggctgggg cctgactgac cggccggtga ttccccgcag aggatttcgt gctccagttt 240 aaggccatgt gctacttcac caatgggacg gagcgcgtgc gttatgtgac cagatacatc 300 tataaccgag aggaggacgt gcgcttcgac agcgacgtgg gggtgtatcg ggcggtgacg 360 ccgcaggggc ggcctgacgc cgagtactgg aacagccaga aggacatcct ggagaggacc 420 cgagcggagt tggacacggt gtgcagacac aactacgagg tggcgttccg cgggatcttg 480 cagaggagag gtgagcgtgg ttgaccctcc gtgaggcgca cccttggccg ggaccccgag 540 tctctgtgcc gggaggggcg atgggggcgc ggcctctgaa atctgagcct cgttcattcc 600 acgccaggag acaggaggcg gcggaggggg tggtgggggc aggtgcaccg gaggagcggg 660 gacctagggc agagcagggg gacaagcaga gttgactagg ctgcctagtg tccccccagc 720 ctccccgtcc gtcggcttcg tcctctgctc tgcaggtttc tcgccttctg ccttgtgcgt 780 ttgcctcctc gtgccttacc tttactaagc agttctctct gcccccagtg cccaccctct 840 tcccctgccc gcctgccccg ctagtactgc cccacccagc aaggcccacg tacgcagctc 900 gcgcctcagg aagcttcagg cttggcctgg tggagttagg gctgccccac aactgcgctc 960 agggcatcca gcaattacag ttgcgaaata agatattttg actttttggc ttcaaatcat 1020 tattcatcgt aattctgttt tcttaaatgg ctatcactca tggcggagat ctttgaggcg 1080 agagactgtt taattattgc atgcttggta cctgacacat tgactggtat gtggtatgag 1140 ctcaatgatc ttccgttaaa ttcatgaata aatgtactca gctgccaatc catttaggtt 1200 cgagaaaaaa cagaggctta caaatggact taattaatta ctttctatca ttttgcttaa 1260 tgcttcaaag taaactctta ttgacttgga tcttaataga atttgtgaat acaaagtctg 1320 aggaaaaaag tgtttgctaa aaataaaaac agtgcttgaa tgatgttgta aggcagagtt 1380 ttaatttctt agaaaagctg aacaaatggc acaatgcaaa gagcagaagt ttgggaataa 1440 ataggttgaa gccattaaat tattggataa aaatagtttc aagttgcttt tggcctaggt 1500 tctccccttc ccccatcact atccacttca ggaataaaca ttctgaaagt caattttacc 1560 cattcaggtg gcacttattt ctagacagtt gccttatcaa ataccatata tgttatgtca 1620 tttaatctca cagttacctg tgcattagag attagcatca ccactttgta tatgctaata 1680 ttggtacatg ataaacactt taagtaatca acccacaatt actcaccaag accttaagcc 1740 tcccaaagta tacaacattc ttatgttcct cactgcacat ctgtagagtc taagagatgt 1800 aaggccttgt taaagccagt tttgaccaga agcagcaatg agtctattcc tgtttgttct 1860 ccatgttaat ggggcattga aaattcactg attaatcaat ccctagtctg accccagtgt 1920 tacctatgca ggttcacaaa actttcagtt tactttatac tcccttgcct tcttttgact 1980 cacaacctaa tgccagcaag tacttatatt tttgctattt cagttctatt tccataaaat 2040 ttattttatc atcttttctc ataaatttgc gccctctatt tttactccca gtctgtttaa 2100 gatgaacaaa tcttataagg ccacataggt gactgtgatt tcagttggac tccaggaagg 2160 agaacctgaa gaaaagttca agtccaagca gaaactgtga tttcttccgg atgatggctc 2220 aagagtgccg tctaattggg gtgcaacctg ctgacctcag caaatcccag ttatatgtat 2280 atgttcacat tacaggctca ttaacccagg cagacctctg cacagatctc agaatatttt 2340 ctatagagaa cgtacatgat aatgtctgat ttcagaacaa gaaagtaatt ctcaatacca 2400 aggaaatgga gtggggtaga cagctagtaa ttaaactcac ttgtgcgtta aaaagaaatt 2460 aaggaaaaaa agaaaatgag agaacatatt actaaataag gaaagcacac attaaatatt 2520 tgctatagtt tcacactaag agaataaagg aaatgcaata aagtggcctg aaaagtaaag 2580 gatgagatgt gtaaagaggc ggggaaagat gtgtcatttt ttttactatg agcagcaatc 2640 tgagaagata aaggaatggg caaacgtgat gtttgatcag tgttatttgt tttcaaggcc 2700 tgcctacttt ttttttcaaa tattacaaat ttttgaagta acattctttt tgttttttgc 2760 tgtctgttac tagattctat aaagtaaatt ctataaagta aattatgtta cacattctat 2820 aaaggcaggg accatggtat gttgtttatc tttggattct cagtgattgt caaatttata 2880 tttgttgaat gaaccttgat ccaagacttg gactccaggt atctttccac tctggttcca 2940 aggagggacc ttcctcatgg tggacgtgct gtgtggtctc acatctcact cctatgtctt 3000 ttcctgtctg ttactgccct cagtggagcc cacagtgacc atctccccat ccaggacaga 3060 ggccctcaac caccacaacc tgctggtctg ctcggtgaca gatttctatc caggccagat 3120 caaagtccag tggtttcgga atgaccagga ggagacagct ggcgttgtgt ccacccccct 3180 tattaggaac ggtgactgga ccttccagat cctggtgatg ctggaaatga ctccccagca 3240 tggagacgtc tacacctgcc acgtggagca ccccagcctc cagagcccca tcaccgtgga 3300 gtggcgtaag gggatattga gtttctgtta ctatgggccc cacaagacaa agagctcctt 3360 ctgatccatt ccttcccatc tcttatccct gatgtcacta ctgagctggg aatcacagaa 3420 gactagacat ctcttgctcc atggcaagtg catcagaaga atcctgatct catcaccttt 3480 ccagatgcta gggaaattac tctacgtact gttgctctag atcccagtcc cgacagctct 3540 cagggactga ttcttagggc tggtgattga gatcttaggg tctaaggtta tggatgagtt 3600 cctgaggagc agagacttac ttccctactc tctcacctac tcactgtatc caaggaccta 3660 ttggctttct ctcccttacg ggtggtctga atggaggact agcttccttt gacgccttca 3720 cctcctgcac ctcagactgg acttcagctc ctcagcaggg atgctatggg gtgtggagac 3780 aaacactgac actcaggctg tactccttag gggctcagtc tgaatctgcc cagaacaaga 3840 tgctgagtgg cattggaggc ttcgtgctgg ggctgatctt cctcgggctg ggccttatca 3900 tccgtcaaag gagtcagaaa ggtgaggaac cctggaggaa aaggggaaga tgggctgcga 3960 cccagaccct ttgttcagag aggtcctgtc tttggacgta gctctttcct cctgaccctg 4020 agaggaagaa ggctaggctg gaggtgggag gagacaggac aagattggaa aaggcattgg 4080 aatctgattt tactggttga aaggtagccc tgtcacagag ctgactgata gagcttattg 4140 caggacaccc ttaccattta tcattgtctc actggctcct ttccaaaagc ttcctccatt 4200 aagagggtca gagcctcggc ctccttgcct tctagtgaaa atttcctttg ttttagggga 4260 ttttaaatta gggtgcttaa ggccttgaag aacatgggtg ggaagagaat ataactaatt 4320 aagtcatgtg tgtcattttc ctttgggatg agagagtgtc tgtttgtgta atgagacctt 4380 tctctgcata acttcctttt gtaggacctc aagggcctcc accagcaggt aatatttcag 4440 ccatgatcca gtatagggag gacacaggta taagggggaa gagcataagc tgagtggacc 4500 tgaccacatg atctctgttc atggcctgtt tgctgctatg aggatcaaga cttacgggag 4560 aagtttgcca gtttctggga atctccagag gttgttcccc agaaccaagc cttaactttg 4620 gtggcatctt cttgtgaaat gtggagccag aaccacagct taaatgttac atactaggat 4680 gatgcccact ttgtgccaca ctttgttggc tactgcctgt aggcattttc cagtgactga 4740 aagaggccac tagtggtgga gatgaggtat catccaattt cctaaaaaga ctgaaccctt 4800 catattcccc agaagaataa cagctgttcc ccgacttccc acacatctgc atcaagctga 4860 agttctgtgt cctcatgagc tgatttcatc tttgcacaga tcttagggga ggtgatgatg 4920 atataccctg gacctcaact ttctctgtct gaagctgcag ggggcccctg aggggtgggg 4980 gagatggcag gcccgccagc ataccctgtg ctgatcactc ctcttctctc ttctccaggg 5040 cttctgcact gactcctgag actattttaa ctagga 5076 //