Dbfetch
ID MZ246854; SV 1; linear; genomic DNA; STD; HUM; 1220 BP. XX AC MZ246854; XX DT 24-MAY-2022 (Rel. 144, Created) DT 09-JUN-2022 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens MHC class II antigen (DPA1) gene, DPA1*01:03:01:05 allele, DE exons 2 and 3 and partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1220 RA Galluccio T.; RT "A new HLA-DPB1 allele discovered in an italian Patient"; RL Unpublished. XX RN [2] RP 1-1220 RA Galluccio T.; RT ; RL Submitted (19-MAY-2021) to the INSDC. RL Laboratorio d'Immunogenetica dei Trapianti, IRCCSOspedale pediatrico RL Bambino Gesu, Viale Ferdinando Baldelli 40, Roma, Roma 00146, Italia XX DR MD5; 2266d11668996957c5ac6f37e9dfb5ba. XX CC ##Assembly-Data-START## CC Assembly Method :: Typestreame v. v1.3 CC Sequencing Technology :: IonTorrent CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1220 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>1220 FT /gene="DPA1" FT /allele="DPA1*01:03:01:05" FT mRNA join(<367..612,953..>1220) FT /gene="DPA1" FT /allele="DPA1*01:03:01:05" FT /product="MHC class II antigen" FT CDS join(<367..612,953..>1220) FT /codon_start=3 FT /gene="DPA1" FT /allele="DPA1*01:03:01:05" FT /product="MHC class II antigen" FT /note="DP alpha chain" FT /protein_id="UQU56081.1" FT /translation="DHVSTYAAFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEF FT GQAFSFEAQGGLANIAILNNNLNTLIQRSNHTQATNDPPEVTVFPKEPVELGQPNTLIC FT HIDKFFPPVLNVTWLCNGELVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVE FT HWGLDQPL" FT exon 367..612 FT /gene="DPA1" FT /allele="DPA1*01:03:01:05" FT /number=2 FT exon 953..>1220 FT /gene="DPA1" FT /allele="DPA1*01:03:01:05" FT /number=3 XX SQ Sequence 1220 BP; 267 A; 315 C; 282 G; 356 T; 0 other; tgaaatatgt aaagtattta gaaggatgcc tggcacaagt aagtgctcaa caaatgttag 60 ctgtcattgt tactattact attgtgtagg gtcaggatgc ccagactttc aaagaccagg 120 aagcagcttg acttatcagt gataaacttt tcattttgtt ctttgctcct ttctttttat 180 aactgctcat ctgctctgta ttatttcctt tatggtgttg ctccttcttc ttccccatat 240 gtccttcctt tgacctctta ccttcttcct ttttatattc ataagtcttt attcattctc 300 tagctttgac cacttgcata ttcaaactga cattttgtcg tgtttttctc tactgtcttt 360 atgcagcgga ccatgtgtca acttatgccg cgtttgtaca gacgcataga ccaacagggg 420 agtttatgtt tgaatttgat gaagatgaga tgttctatgt ggatctggac aagaaggaga 480 ccgtctggca tctggaggag tttggccaag ccttttcctt tgaggctcag ggcgggctgg 540 ctaacattgc tatattgaac aacaacttga ataccttgat ccagcgttcc aaccacactc 600 aggccaccaa cggtacgccc tatctttgcc tcttcctctg tagcccaact ggaagggatg 660 agagggcctc tctgccaccc tcagactagg aagcctaagt gccccctgct gtgtgatcct 720 cttcccctag tggccatggg ctgatcccac tacagcaagg gcttgcatcc tctcttctca 780 ggagagagaa aggtgagcag agtgaggctg gtcagtggtg tgatacccct ctctgtgatt 840 cagagctgcc ataaaatcta aggctgaggt agaggaccac cctcccctaa gaggtggagc 900 ctttgtgatt catcccagaa gaggggccta acctggtgct gtctccttcc agatccccct 960 gaggtgaccg tgtttcccaa ggagcctgtg gagctgggcc agcccaacac cctcatctgc 1020 cacattgaca agttcttccc accagtgctc aacgtcacgt ggctgtgcaa cggggagctg 1080 gtcactgagg gtgtcgctga gagcctcttc ctgcccagaa cagattacag cttccacaag 1140 ttccattacc tgacctttgt gccctcagca gaggacttct atgactgcag ggtggagcac 1200 tggggcttgg accagccgct 1220 //