Dbfetch

ID   MZ091414; SV 1; linear; genomic DNA; STD; HUM; 1068 BP.
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AC   MZ091414;
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DT   30-JUL-2021 (Rel. 144, Created)
DT   30-JUL-2021 (Rel. 144, Last updated, Version 1)
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DE   Homo sapiens clone 20220086 MHC class II antigen (HLA-DQA1) gene, complete
DE   cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-1068
RA   Fuerst D., Tsamadou C., Neuchel C.;
RT   "HLA-DQA1*03var, a novel HLA-DQA1 allele";
RL   Unpublished.
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RN   [2]
RP   1-1068
RA   Fuerst D., Tsamadou C., Neuchel C.;
RT   ;
RL   Submitted (04-MAY-2021) to the INSDC.
RL   Transplant Immunology, Institute for Clinical Transfusion Medicine Ulm,
RL   Helmholtzstr.10, Ulm, BW 89077, Germany
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DR   MD5; 8c911f9bd89c226745aacb722cfb0cba.
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..1068
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /clone="20220086"
FT                   /tissue_type="blood"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>1068
FT                   /gene="HLA-DQA1"
FT   mRNA            join(<1..82,183..431,532..813,914..>1068)
FT                   /gene="HLA-DQA1"
FT                   /product="MHC class II antigen"
FT   CDS             join(1..82,183..431,532..813,914..1068)
FT                   /codon_start=1
FT                   /gene="HLA-DQA1"
FT                   /product="MHC class II antigen"
FT                   /protein_id="QXU63157.1"
FT                   /translation="MILNKALMLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPS
FT                   GQYSHEFDGDEEFYVDLERKETVWQLPLFRRFRRFDPQFALTNIAVLKHNLNIVIKRSN
FT                   STAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSF
FT                   LSKSDHSFFKISYLTFLPSDDEIYDCKVEHWGLDEPLLKHWEPEIPTPMSKLTETVVCA
FT                   LGLSVGLVGIVVGTVLIIRGLRSVGASRHQGPL"
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SQ   Sequence 1068 BP; 168 A; 201 C; 197 G; 202 T; 300 other;
     atgatcctaa acaaagctct gatgctgggg gccctcgccc tgaccaccgt gatgagccct        60
     tgtggaggtg aagacattgt ggnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       120
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       180
     nnctgaccat gttgcctctt acggtgtaaa cttgtaccag tcttatggtc cctctgggca       240
     gtacagccat gaatttgatg gagacgagga gttctatgtg gacctggaga ggaaggagac       300
     tgtctggcag ttgcctctgt tccgcagatt tagaagattt gacccgcaat ttgcactgac       360
     aaacatcgct gtgctaaaac ataacttgaa catcgtgatt aaacgctcca actctaccgc       420
     tgctaccaat gnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       480
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn naggttcctg       540
     aggtcacagt gttttccaag tctcccgtga cactgggtca gcccaacacc ctcatctgtc       600
     ttgtggacaa catctttcct cctgtggtca acatcacctg gctgagcaat gggcactcag       660
     tcacagaagg tgtttctgag accagcttcc tctccaagag tgatcattcc ttcttcaaga       720
     tcagttacct caccttcctc ccttctgatg atgagattta tgactgcaag gtggagcact       780
     ggggcctgga tgagcctctt ctgaaacact gggnnnnnnn nnnnnnnnnn nnnnnnnnnn       840
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       900
     nnnnnnnnnn nnnagcctga gattccaaca cctatgtcaa agctcacaga gactgtggtc       960
     tgcgccctgg ggttgtctgt gggcctcgtg ggcattgtgg tggggaccgt cttgatcatc      1020
     cgaggcctgc gttcagttgg tgcttccaga caccaagggc ccttgtga                   1068
//