Dbfetch
ID MW817154; SV 1; linear; genomic DNA; STD; HUM; 4085 BP.
XX
AC MW817154;
XX
DT 25-AUG-2021 (Rel. 144, Created)
DT 25-AUG-2021 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens isolate THC0381 MHC class I protein (HLA-B) gene,
DE HLA-B*35extended allele, complete cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-4085
RA Khor S.-S., Ito I., Sato T., Tokunaga K.;
RT ;
RL Submitted (26-MAR-2021) to the INSDC.
RL Department of Human Genetics, The University of Tokyo, Hongo 7-3-1, Bunkyo
RL Ward, Tokyo 1130033, Japan
XX
DR MD5; cd30d53b24a18001cebdbf8e099cecc8.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: NGSengine v. 2.18.0.17625
CC Sequencing Technology :: PacBio
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..4085
FT /organism="Homo sapiens"
FT /isolate="THC0381"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>4085
FT /gene="HLA-B"
FT /allele="HLA-B*35extended"
FT mRNA join(<1..357,487..756,1002..1277,1853..2128,2233..2349,
FT 2791..2823,2930..>4085)
FT /gene="HLA-B"
FT /allele="HLA-B*35extended"
FT /product="MHC class I protein"
FT exon <1..357
FT /gene="HLA-B"
FT /allele="HLA-B*35extended"
FT /number=1
FT 5'UTR <1..284
FT /gene="HLA-B"
FT /allele="HLA-B*35extended"
FT CDS join(285..357,487..756,1002..1277,1853..2128,2233..2349,
FT 2791..2823,2930..2973)
FT /codon_start=1
FT /gene="HLA-B"
FT /allele="HLA-B*35extended"
FT /product="MHC class I protein"
FT /protein_id="QZA66417.1"
FT /translation="MRVTAPRTVLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRESLRN
FT LRGYYNQSEAGSHIIQRMYGCDLGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTA
FT AQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK
FT GGSYSQAASSDSAQGSDVSLTA"
FT exon 487..756
FT /gene="HLA-B"
FT /allele="HLA-B*35extended"
FT /number=2
FT exon 1002..1277
FT /gene="HLA-B"
FT /allele="HLA-B*35extended"
FT /number=3
FT exon 1853..2128
FT /gene="HLA-B"
FT /allele="HLA-B*35extended"
FT /number=4
FT exon 2233..2349
FT /gene="HLA-B"
FT /allele="HLA-B*35extended"
FT /number=5
FT exon 2791..2823
FT /gene="HLA-B"
FT /allele="HLA-B*35extended"
FT /number=6
FT exon 2930..>4085
FT /gene="HLA-B"
FT /allele="HLA-B*35extended"
FT /number=7
FT 3'UTR 2974..>4085
FT /gene="HLA-B"
FT /allele="HLA-B*35extended"
XX
SQ Sequence 4085 BP; 771 A; 1152 C; 1235 G; 927 T; 0 other;
gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagagcct 60
tgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120
tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180
ccattgggtg tcggatatct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240
tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300
cccgaaccgt cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggccggtg 360
agtgcggggt cgggagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg 420
gcgcaggacc tgaggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480
ccccaggctc ccactccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg 540
agccccgctt catcgcagtg ggctacgtgg acgacaccca gttcgtgagg ttcgacagcg 600
acgccgcgag tccgaggacg gagccccggg cgccatggat agagcaggag gggccggagt 660
attgggaccg gaacacacag atcttcaaga ccaacacaca gacttaccga gagagcctgc 720
ggaacctgcg cggctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780
aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840
atccgcctcc ctgaggccgc gggacccgcc cagaccctcg accggcgaga gccccaggcg 900
cgtttacccg gtttcatttt cagttgaggc caaaatcccc gcgggttggt cggggcgggg 960
cggggctcgg gggacggggc tgaccgcggg gccggggcca gggtctcaca tcatccagag 1020
gatgtatggc tgcgacctgg ggcccgacgg gcgcctcctc cgcgggcatg accagtccgc 1080
ctacgacggc aaggattaca tcgccctgaa cgaggacctg agctcctgga ccgcggcgga 1140
caccgcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcagctgag 1200
agcctacctg gagggcctgt gcgtggagtg gctccgcaga tacctggaga acgggaagga 1260
gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320
ccggggatgg cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct 1380
cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct 1440
ctaggacaat taagggatga cgtctctgag gaaatggagg ggaagacagt ccctagaata 1500
ctgatcaggg gtcccctttg acccctgcag cagccttggg aaccgtgact tttcctctca 1560
ggccttgttc tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt 1620
cactttacct ccactcagat caggagcaga agtccctgtt ccccgctcag agactcgaac 1680
tttccaatga ataggagatt atcccaggtg cctgcgtcca ggctggtgtc tgggttctgt 1740
gccccttccc cacaccaggt gtcctgtcca ttctcaggct ggtcacatgg gtggtcctag 1800
ggtgtcccat gagagatgca aagcgcctga attttctgac tcttcccatc agacccccca 1860
aagacacacg tgacccacca ccccgtctct gaccatgagg ccaccctgag gtgctgggcc 1920
ctgggcttct accctgcgga gatcacactg acctggcagc gggatggcga ggaccaaact 1980
caggacactg agcttgtgga gaccagacca gcaggagata gaaccttcca gaagtgggca 2040
gctgtggtgg tgccttctgg agaagagcag agatacacat gccatgtaca gcatgagggg 2100
ctgccgaagc ccctcaccct gagatggggt aaggaggggg atgaggggtc atatctcttc 2160
tcagggaaag caggagccct tctggagccc ttcagcaggg tcagggcccc tcgtcttccc 2220
ctcctttccc agagccatct tcccagtcca ccatccccat cgtgggcatt gttgctggcc 2280
tggctgtcct agcagttgtg gtcatcggag ctgtggtcgc tactgtgatg tgtaggagga 2340
agagctcagg tagggaaggg gtgaggggtg gggtctgggt tttcttgtcc cactgggggt 2400
ttcaagcccc aggtagaagt gttccctgcc tcattactgg gaagcagcat ccacacaggg 2460
gctaacgcag cctgggaccc tgtgtgccag cacttactct tttgtgcagc acatgtgaca 2520
atgaaggacg gatgtatcac cttgatggtt gtggtgttgg ggtcctgatt tcagcattca 2580
tgagtcaggg gaaggtccct gctaaggaca gaccttagga gggcagttgg tccaggaccc 2640
acacttgctt tcctcgtgtt tcctgatcct gccttgggtc tgtagtcata cttctggaaa 2700
ttccttttgg gtccaagacg aggaggttcc tctaagatct catggccctg cttcctccca 2760
gtcccctcac aggacatttt cttcccacag gtggaaaagg agggagctac tctcaggctg 2820
cgtgtaagtg gtgggggtgg gagtgtggag gagctcaccc accccataat tcctcctgtc 2880
ccacgtctcc tgcgggctct gaccaggtcc tgtttttgtt ctactccagc cagcgacagt 2940
gcccagggct ctgatgtgtc tctcacagct tgaaaaggtg agattcttgg ggtctagagt 3000
gggcgggggg ggcggggagg gggcagaggg gaaaggcctg ggtaatggag attctttgat 3060
tgggatgttt cgcgtgtgtc gtgggctgtt cagagtgtca tcacttacca tgactaacca 3120
gaatttgttc atgactgttg ttttctgtag cctgagacag ctgtcttgtg agggactgag 3180
atgcaggatt tcttcactcc tcccctttgt gacttcaaga gcctctggca tctctttctg 3240
caaaggcacc tgaatgtgtc tgtgtccctg ttagcctaat gtgaggaggt ggagagacag 3300
cccacccccg tgtccactgt gacccctgtt cccatgctga cctgtgtttc ctccccagtc 3360
atctttcttg ttccagagag gtggggctgg atgtctccat ctctgtctca actttatgtg 3420
cactgagctg caacttctta cttccctact gaaaataaga atctgaatat aaatttgttt 3480
tctcaaatat ttgctatgag aggttgatgg attaattaaa taagtcaatt cctggaattt 3540
gaaagagcaa ataaagacct gagaaccttc cagaatctgc atgttcgctg tgctgagtct 3600
gttgcaggtg gggtgtggag aaggctgtgg ggggccgagt gtggatgggg cctgtgccca 3660
tttggtgttg agtccatcat gggctttatg tggttagtcg tcagctgggt caccttcact 3720
gctccattgt ccttgtccct tcagtggaaa cttgtccagt gggagctgtg accacagagg 3780
ctcacacatc gcccagggtg gcccctgcac acgggggtct ctgtgcattc tgagacaaat 3840
tttcagagcc attcacctcc tgccctgctt ctagagctcc ttttctgctc tgctctcctg 3900
ccctctctcc ctgccctggt tctagtgatc ttggtgctga atccaatccc aactcctgaa 3960
tctgtaaagc agagtctaat ttagacttac atttgtctgt gaaattggac ccgtcatcaa 4020
ggactgttct ttcctgaaga gagaacctga ttgtgtgctg cagtgtgctg gggcaggggg 4080
tgcgg 4085
//