Dbfetch

Dbfetch

ID   MW411626; SV 1; linear; genomic DNA; STD; HUM; 1068 BP.
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AC   MW411626;
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DT   20-JUL-2021 (Rel. 144, Created)
DT   20-JUL-2021 (Rel. 144, Last updated, Version 1)
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DE   Homo sapiens MHC class II antigen (HLA-DQA1) gene, HLA-DQA1*01:NEW allele,
DE   complete cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-1068
RA   Cargou M., Andreani M., Battara M., Wojciechowski E., Visentin J.;
RT   "Characterization of the novel HLA-DQA1*01:XX allele by sequencing-based
RT   typing";
RL   Unpublished.
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RN   [2]
RP   1-1068
RA   Cargou M., Andreani M., Battara M., Wojciechowski E., Visentin J.;
RT   ;
RL   Submitted (24-DEC-2020) to the INSDC.
RL   laboratoire d'Immunologie et d'Immunogenetique, CHU Bordeaux, Place Amelie
RL   Raba Leon, Bordeaux, Gironde 33076, France
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DR   MD5; 6e8e234617ff0f3d29dd42804cab5c39.
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CC   ##Assembly-Data-START##
CC   Assembly Method       :: TypeStream Visual v. 2.0.0
CC   Sequencing Technology :: Illumina
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..1068
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>1068
FT                   /gene="HLA-DQA1"
FT                   /allele="HLA-DQA1*01:NEW"
FT   mRNA            join(<1..82,183..431,532..813,914..>1068)
FT                   /gene="HLA-DQA1"
FT                   /allele="HLA-DQA1*01:NEW"
FT                   /product="MHC class II antigen"
FT   CDS             join(1..82,183..431,532..813,914..1068)
FT                   /codon_start=1
FT                   /gene="HLA-DQA1"
FT                   /allele="HLA-DQA1*01:NEW"
FT                   /product="MHC class II antigen"
FT                   /protein_id="QXL99756.1"
FT                   /translation="MILNKALLLGALALTTVMSPCGGEDIVADHVASCGVNLYQFYGPS
FT                   GQYTHEFDGDEQFYVDLERKETARRWPEFSKFGGFDPQGALRNMAVAKHNLNIMIKRYN
FT                   STAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSF
FT                   LSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCA
FT                   LGLSVGLMGIVVGTVFIIQGLRSVGASRHQGPL"
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SQ   Sequence 1068 BP; 167 A; 202 C; 202 G; 197 T; 300 other;
     atgatcctaa acaaagctct gctgctgggg gccctcgctc tgaccaccgt gatgagcccc        60
     tgtggaggtg aagacattgt ggnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       120
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       180
     nnctgaccac gttgcctctt gtggtgtaaa cttgtaccag ttttacggtc cctctggcca       240
     gtacacccat gaatttgatg gagatgagca gttctacgtg gacctggaga ggaaggagac       300
     tgccaggcgg tggcctgagt tcagcaaatt tggaggtttt gacccgcagg gtgcactgag       360
     aaacatggct gtggcaaaac acaacttgaa catcatgatt aaacgctaca actctaccgc       420
     tgctaccaat gnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       480
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn naggttcctg       540
     aggtcacagt gttttccaag tctcccgtga cactgggtca gcccaacacc ctcatttgtc       600
     ttgtggacaa catctttcct cctgtggtca acatcacatg gctgagcaat gggcagtcag       660
     tcacagaagg tgtttctgag accagcttcc tctccaagag tgatcattcc ttcttcaaga       720
     tcagttacct caccttcctc ccttctgctg atgagattta tgactgcaag gtggagcact       780
     ggggcctgga ccagcctctt ctgaaacact gggnnnnnnn nnnnnnnnnn nnnnnnnnnn       840
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       900
     nnnnnnnnnn nnnagcctga gattccagcc cctatgtcag agctcacaga gactgtggtc       960
     tgtgccctgg ggttgtctgt gggcctcatg ggcattgtgg tgggcactgt cttcatcatc      1020
     caaggcctgc gttcagttgg tgcttccaga caccaagggc cattgtga                   1068
//