Dbfetch
ID MW194112; SV 1; linear; genomic DNA; STD; HUM; 6746 BP. XX AC MW194112; XX DT 19-NOV-2020 (Rel. 144, Created) DT 20-APR-2021 (Rel. 144, Last updated, Version 4) XX DE Homo sapiens MHC class II antigen (HLA-DQB1) gene, HLA-DQB1*02:02 NEW DE allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-6746 RA Senoussi O., Dard C.; RT ; RL Submitted (30-OCT-2020) to the INSDC. RL Histocompatibility Laboratory, EFS Grenoble, 29 Avenue du Maquis du RL Gresivaudan, La Tronche 38701, France XX DR MD5; b1a1c620e78f9d96a600647824214818. XX CC ##Assembly-Data-START## CC Assembly Method :: OMIXON HLA TWIN v. 4.2 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..6746 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>6746 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:02 NEW" FT mRNA join(<1..109,1548..1817,4704..4985,5502..5612,6733..>6746) FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:02 NEW" FT /product="MHC class II antigen" FT CDS join(1..109,1548..1817,4704..4985,5502..5612,6733..6746) FT /codon_start=1 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:02 NEW" FT /product="MHC class II antigen" FT /protein_id="QOW17632.1" FT /translation="MSWKKALRIPGGLRAATVTLMLSMLSTPVAEGRDSPEDFVYQFKG FT MCYFTNGTERVRLVSRSIYNREEIVRFDSDVGEFRAVTLLGLPAAEYWNSQKDILERKR FT AAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRW FT FRNGQEETAGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQSPITVEWRA FT QSESAQSKMLSGIGGFVLGLIFLGLGLIIHHRSQKGLLH" XX SQ Sequence 6746 BP; 1704 A; 1539 C; 1654 G; 1849 T; 0 other; atgtcttgga aaaaggcttt gcggatcccc ggaggccttc gggcagcaac tgtgaccttg 60 atgctgtcga tgctgagcac cccagtggct gagggcagag actctcccgg taagtgcagg 120 gcagctgctc tccagagccg ctactctggg aacaggctct ccttgggctg gggtacgggg 180 atggtgatct ccataatctc ggacacaatc ttttatcaac atttcctctg ttttgggaaa 240 gagagctatg ttgcatttcc atttatcttt taatgatgaa gtgaggacaa tccaatccca 300 tcctacaggc ttaagcctgg aagaggagga gagaggagag aaaagaggag acaaagtgtt 360 catttactac cagtgatagg acaaagtgag catggggtta tttttgaaga tatgaatttc 420 tccaaagaca cagcaggatt tgccatttag gcgtgtccca agacttgcct ggactaaata 480 ttatgatttc ctgcattggg aaatgcaagg cagcaatggt gtctgtagtc tccgtatttg 540 gggaaaagtt gtctgtattc ctgacccagt ggagcgtttg tggaggcaaa atcttggtac 600 tgagggaagc tgactggctg accacagaaa gagagccttc aggtttcact gatttatggg 660 caaatggtga cctgagtggg attcagatac ccgagttgat gatggactaa atttagtaga 720 aaggaggatg taaagaaggg aaataacaca tactgtgaaa ccactcattt cagacacaga 780 acaatacttt acataaattc tctctcactc cttctaacat cctgtgtgta gatatcatga 840 ttttctttta cacaattata cttgtgatat ggatattctg ttacataacc tgcccgggct 900 ggtgactgcc acagtttaat gggaatctag tttatcaaat tcaaaagctt gtgctctttc 960 ggtgaataaa tgtttctttc taggactcag agatctagga ctcccttctt tctaacacag 1020 aagtgagtga acctcacagg gcacttggga gggtaaatcc aggcatggga aggaaggtat 1080 tttacccagg gaccaagaga ataggcgtat cggaagagga caggtttaat tcctggacct 1140 gtctcgtcat tcccttgaac tgtcaggttt atgtggataa ctttatctct gaggtaccca 1200 ggagctccat ggaaaatgag atttcatgcg agaacgccct gatccctcta agtgcagagg 1260 tccatgtaaa atcagcccga ctgcctcttc acttggttca caggccgaga cagggacagg 1320 gctttcctcc ctttcctgcc tttaggaagg cggattcccg aagacccccg agagggcggg 1380 cagggctggg cagagccgcc gggaggatcc caggtctgca gcgcgaggca cgggccggcg 1440 ggaacttgtg gtcgcgcggg ctgttccaca gctccgggcc gggtcagggt ggcggctgcg 1500 ggggcggacg ggctgggccg cactgactgg ccggtgattc ctcgcagagg attttgtgta 1560 ccagtttaag ggcatgtgct acttcaccaa cgggacagag cgcgtgcgtc ttgtgagcag 1620 aagcatctat aaccgagaag agatcgtgcg cttcgacagc gacgtggggg agttccgggc 1680 ggtgacgctg ctggggctgc ctgccgccga gtactggaac agccagaagg acatcctgga 1740 gaggaaacgg gcggcggtgg acagggtgtg cagacacaac taccagttgg agctccgcac 1800 gaccttgcag cggcgaggtg agcggcgtcg cccctctgcg aggcccaccc ttggccccaa 1860 gtctctgcgc caggaggggc gaagggtcgt tgcctctgga acctgagccc cgtttgttcc 1920 accccagagg acaggaggca gcggcgagag tggtgggggc aggtgcatcg gaggtgcggg 1980 gacctagggc agagcagggg gacaggcaga gttggccagg ctgcctagtg tcgccccagc 2040 ctacccgttc gtcggccttg tcctctgctc tgcatgttct tgcctcgtgc cttatgcatt 2100 tgcctccttt tgccttacct ttgctaagca gctctctctg ctcagaatgc ccgccctctt 2160 cccctgcccg cccgcccgcc ccgctagcac tgccccaccc agcaaggccc acgtgcacag 2220 ctcttgcagc aggaagcttc aggcttagcc tggtggagtt agggctgttc cacaactgcg 2280 cgcaggacat ccagcaatta cagttgtgaa ataagatatt ttaacttttg gcttcaaatc 2340 attattcatc gtaattctgt tttcttaaat ggctctcatt catggcagag atctttgagg 2400 tgagggtgtt ttaatcattg catgcctagt acctgacaca ttgactggta tgtggtgtga 2460 gctcaatgat cttctgttaa attaatgaat aaatgtactc agctgcccat ccacttaggc 2520 tcaagaaaaa aaaagaggta aacagagcct taaaaatgga ctttattaat tattttctat 2580 aattttgctt aatgctttaa agtaaactct tattgacttg gatcttaata gagtttgtga 2640 atacaaaatc tgaggaaaaa agtttttgct aaaaataaaa acaacgcttg aaagatattg 2700 taatgcagtt taaatttctt ttcttttttt tttttttttt tgagacggat tctcactctg 2760 tcgcccaggc cggagtgcag tggcgcgatc tcggctcact gcaagctccg cctcccgggt 2820 tcacgccatt ctcctgcctc agcctcctga gtaggtggga ttacaggcgc gtgccaccac 2880 gcccggctaa tttttttgta tttttagtag aggcggggtt tcaccgtgtt agccaggatg 2940 gtctggatct cctgacctca tgatccgccc gcctcggcct cccaaagtgc tgggattaca 3000 ggtgtgagcc acagtgcccg gccggcactt ttaatttctt agaaaagctg aacaaatggc 3060 acaatgcaaa gagcaaaagt tttggaataa atagattgaa gccattaaat tattggataa 3120 aaatagtttc gggttgcttt tggcctaggt tctcccctcc ccccatgact atccacttca 3180 ggaataaaca ttctgaaagt caattttacc catttagtga gcatttattt ctagacagtt 3240 gccttatcaa ataccatcta tgttacgtca tttaatctca cagttacttg tgcatcagag 3300 attagcatca ccactttata tattggtaca tgataaacac tttattggtc atggatgggg 3360 agatggtcac tgtaggctaa tattggtaca tgataaacac tttaagtaat cagcccataa 3420 ttgctcacca agaccttaag cctcccaaag tacacaacat tctttgtgtt cttcactaca 3480 catccataga gtctaaggga cgtaaagcct cgttaaagcc agttttgacc agaagcagca 3540 atgagtctat tcctgtgtgt tttccatgtt aatgggacaa aatgatactt tcaaggcatt 3600 gaaaattcat gattaatcaa tcgctagtct gaccccagtg ttatctatgc aggtttgcaa 3660 aacctttagt ttacttaata ctcccttgcc ttcttttgat tcacatccta atgccagcaa 3720 atacttatgt ttttgctatt tcagttccat ttccataaaa tttattttat catcttttct 3780 cataaattta tgccctctat ttttactccc aatctgttta agatgaacaa atcttataag 3840 gccacatagc tgactgttat ttctgttgga ctccaggaag gagaacctaa agaaaagttc 3900 aagtccaagc agaaaccgtg atttcttcca gatgatggct catgagtgcc atttaattgg 3960 ggtgccacct ggtgacctca gcaaatccca gctatattta tgtgttcaca ttacaggatc 4020 attaacccag accgaccact gcacagatct cagaatattt tctatggaga acatacataa 4080 taatgcctga tttcagaaga agaaagtaat tctcaatagc aaggggatgg agtagggtag 4140 acagctgtaa ttaaactcac ttgtgtgata aaaagaaatt aaggaaaaaa gaaaatgaga 4200 gaacatatta ctaaataaag aaagcataca ttaaatattt actatagttt cacactaaga 4260 gaataaagga aatgcaataa agtggcctga aaggtaaagg atgagatgtg taaaggggtg 4320 tagtattttt actatgagca gcaatctgag aagataaagg aatcgagtta cgggcaaaca 4380 tgatgtttga tcagtgttat ttgttttcaa ggcctgccta aatttttttc aaatattaca 4440 aacttttgaa ataacattct ttttgttttt tgctgtctgt tactaggttg cacattttat 4500 aaaggcaggg accatggtat gttgtttgtc tttggattct cagtgattgt tatatttata 4560 tttgttgaag gaaccttaat ccaagacttg gactccaagt atctttccac tctggttcca 4620 aggagggacc ttcctcacag caggcatgct gtgtggtctc acatctcact cctatatctt 4680 tccctgtctg ttactgccct cagtggagcc cacagtgacc atctccccat ccaggacaga 4740 ggccctcaac caccacaacc tgctggtctg ctcggtgaca gatttctatc cagcccagat 4800 caaagtccgg tggtttcgga atggccagga ggagacagct ggcgttgtgt ccacccccct 4860 tattaggaat ggtgactgga ccttccagat cctggtgatg ctggaaatga ctccccagcg 4920 tggagacgtc tacacctgcc acgtggagca ccccagcctc cagagcccca tcaccgtgga 4980 gtggcgtaag gggatattga gtttctgtta ctgtgggccc cacaagacaa aggacagagc 5040 tccttctgac ccatcccttc ccatctctta tccctgatgt cactgctgag ctgggaatca 5100 caggagacta gagcacctct agttccatgg cgagtgcatc agaagaatcc tgatctcatc 5160 acctttccag atgctaggga aattactcta catactgttg ctctggatcc cagtcctgat 5220 tgctctgagg aactgattat tagggctggt gactgggatc ttagggtcta agtttatgga 5280 tgagttcctg aggagtggag atctgcttcc ccactctgtc acctactcac tgtatccaag 5340 tacctattgg ctggcctttc cctcccttag gggtggtctg aatggagaac taggttcctt 5400 tgatgccttc acctcctgca tctcagactg gacttcagct cctcatcagg gaaactatgg 5460 ggtatgggga caaacactga cactcaggct ctgcttctca ggggctcaat ctgaatctgc 5520 ccagagcaag atgctgagtg gcattggagg cttcgtgctg gggctgatct tcctcgggct 5580 gggccttatc atccatcaca ggagtcagaa aggtgaggaa ccccagggga aaaggggaag 5640 atggcctgtg acccagaccc tctgttcaga gaggtcctgt ctctagatgt agctctttcc 5700 tcctgaccct gagaggaaga aagctgagct ggaagtggaa ggagacagga caaggttgga 5760 ggaggcattg gaatctgatt ttactagctg aagggtagcc ctgtcacaga gctgactgat 5820 agagcttatt ccagggcatc cttaccattc atcattgtct cactggctcc tttccaaaaa 5880 cttcctccat taagagggtc agagcctcgg cctccttgcc ttctagtgac aatttccttt 5940 attttagggg attttaaatt agggtgctta aggacttgaa gaacatgaat gggaagagaa 6000 tataactcta attaagtcac atgtgtcatt ttcctttggg gtgagagagt ggctgttcat 6060 gtaatgagac ctttctctgc ataacttcct tttgtaagac ctcaagggcc tccaccagca 6120 ggtaatattt cagccgtgat ccagtgtggg gagggcacag gtgtaagagg gaagagcatg 6180 agctgagtgt acctgacagt agtggtctct gttcatggta tatttgctgc tatgaggatc 6240 aagacttagg ggtgaagttt gccagtttct aggaatctcc agaggttgtt ccccagaacc 6300 aagccttaac tttggtggta tcttcctgtg aaatgtggag ccagaaccac ggcttaaatg 6360 ttagacacta ggatgatgcc cactttgtgc cacatgatgg tggctactgc ctgtaggcat 6420 tttccagtga ctgaaagagg ctgctagtgg tagggatgag gtatcatcca atttcctaaa 6480 aagattgaac ccttcatatt caccagaaga gtaacagctg ttcccccacc tcccacacat 6540 ctgcatcaag ctgaagttct gtgtcttcat gagctgattt cacctttgca cagatcttgg 6600 gggaggtgat gataatacac tctggacctc agctttgtct gtctgaagct gcaggaggcc 6660 cctgaggggt gggggagatg gcaggcccac cagcgtaccc tgtgctgatc atccctcttc 6720 tctcttcttc agggctcctg cactga 6746 //