Dbfetch
ID MW118597; SV 1; linear; genomic DNA; STD; HUM; 5060 BP. XX AC MW118597; XX DT 19-NOV-2020 (Rel. 144, Created) DT 20-APR-2021 (Rel. 144, Last updated, Version 3) XX DE Homo sapiens MHC class II antigen (HLA-DQB1) gene, HLA-DQB1*06:NEW allele, DE partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5060 RA Sanchez Gordo Fd.P.; RT ; RL Submitted (14-OCT-2020) to the INSDC. RL Tipaje HLA, Centro de Transfusion Sanguinea y Banco de Tejidos, Avda Galvez RL Ginachero S/N, Malaga 29009, Spain XX DR MD5; 1887739cab6743d130287ca28cff6a1e. XX CC ##Assembly-Data-START## CC Assembly Method :: Type Stream Visual -One Lambda v. 2.0 CC Sequencing Technology :: IonTorrent CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..5060 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>5060 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*06:NEW" FT mRNA join(<220..489,3023..3304,3810..3920,4404..4427, FT 5038..>5060) FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*06:NEW" FT /product="MHC class II antigen" FT CDS join(<220..489,3023..3304,3810..3920,4404..4427,5038..5051) FT /codon_start=3 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*06:NEW" FT /product="MHC class II antigen" FT /protein_id="QOU12043.1" FT /translation="DFVLQFKAMCYFTNGTERVRYVTRYIYNREEDVRFDSDVGVYRAV FT TPQGRPDAEYWNSQKDILERTRAELDTVCRHNYEVAFRGILQRRVEPTVTISPSRTEAL FT NHHNLLVCSVTDFYPGQIKVRWFRNDQEETAGVVSTPLIRNGDWTFQILVMLEMTPQHG FT DVYTCHVEHPSLQSPITVEWRAQSESAQNKMLSGIGGFVLGLIFLGLGLIIRQRSQKGP FT QGPPPAGLLH" XX SQ Sequence 5060 BP; 1280 A; 1173 C; 1236 G; 1371 T; 0 other; tgtaggaagg cagattcccg aagcccccag agagggcggg cagggctgag cagagccgcc 60 gggaggatcc cagttctgga gcgccagaca cgggcaggcg ggaactggag gtcgcgcggg 120 cggttccaca gctccgggcc gggtcagggc ggcggctgcg ggggcggccg ggctagggcc 180 aggctggggc ctgactgacc ggccggtgat tccccgcaga ggatttcgtg ctccagttta 240 aggccatgtg ctacttcacc aatgggacgg agcgcgtgcg ttatgtgacc agatacatct 300 ataaccgaga ggaggacgtg cgcttcgaca gcgacgtggg ggtgtatcgg gcggtgacgc 360 cgcaggggcg gccagacgcc gagtactgga acagccagaa ggacatcctg gagaggaccc 420 gagcggagtt ggacacggtg tgcagacaca actacgaggt ggcgttccgc gggatcttgc 480 agaggagagg tgagcgtggt tgaccctccg tgaggcgcac ccttggccgg gaccccgagt 540 ctctgtgccg ggaggggcga tgggggcgcg gcctctgaaa tctgagcctc gttcattcca 600 cgccaggaga caggaggcgg cggagggggt ggtgggggca ggtgcaccgg aggagcgggg 660 acctagggca gagcaggggg acaagcagag ttgactaggc tgcctagtgt ccccccagcc 720 tccccgtccg tcggcttcgt cctctgctct gcaggtttct cgccttctgc cttgtgcgtt 780 tgcctcctcg tgccttacct ttactaagca gttctctctg cccccagtgc ccaccctctt 840 cccctgcccg cctgccccgc tagtactgcc ccacccagca aggcccacgt acgcagctcg 900 cgcctcagga agcttcaggc ttggcctggt ggagttaggg ctgccccaca actgcgctca 960 gggcatccag caattacagt tgcgaaataa gatattttga ctttttggct tcaaatcatt 1020 attcatcgta attctgtttt cttaaatggc tatcactcat ggcggagatc tttgaggcga 1080 gagactgttt aattattgca tgcttggtac ctgacacatt gactggtatg tggtatgagc 1140 tcaatgatct tccgttaaat tcatgaataa atgtactcag ctgccaatcc atttaggttc 1200 gagaaaaaac agaggcttac aaatggactt aattaattac tttctatcat tttgcttaat 1260 gcttcaaagt aaactcttat tgacttggat cttaatagaa tttgtgaata caaagtctga 1320 ggaaaaaagt gtttgctaaa aataaaaaca gtgcttgaat gatgttgtaa ggcagagttt 1380 taatttctta gaaaagctga acaaatggca caatgcaaag agcagaagtt tgggaataaa 1440 taggttgaag ccattaaatt attggataaa aatagtttca agttgctttt ggcctaggtt 1500 ctccccttcc cccatcacta tccacttcag gaataaacat tctgaaagtc aattttaccc 1560 attcaggtgg cacttatttc tagacagttg ccttatcaaa taccatatat gttatgtcat 1620 ttaatctcac agttacctgt gcattagaga ttagcatcac cactttgtat atgctaatat 1680 tggtacatga taaacacttt aagtaatcaa cccacaatta ctcaccaaga ccttaagcct 1740 cccaaagtat acaacattct tatgttcctc actgcacatc tgtagagtct aagagatgta 1800 aggccttgtt aaagccagtt ttgaccagaa gcagcaatga gtctattcct gtttgttctc 1860 catgttaatg gggcattgaa aattcactga ttaatcaatc cctagtctga ccccagtgtt 1920 acctatgcag gttcacaaaa ctttcagttt actttatact cccttgcctt cttttgactc 1980 acaacctaat gccagcaagt acttatattt ttgctatttc agttctattt ccataaaatt 2040 tattttatca tcttttctca taaatttgcg ccctctattt ttactcccag tctgtttaag 2100 atgaacaaat cttataaggc cacataggtg actgtgattt cagttggact ccaggaagga 2160 gaacctgaag aaaagttcaa gtccaagcag aaactgtgat ttcttccgga tgatggctca 2220 agagtgccgt ctaattgggg tgcaacctgc tgacctcagc aaatcccagt tatatgtata 2280 tgttcacatt acaggctcat taacccaggc agacctctgc acagatctca gaatattttc 2340 tatagagaac gtacatgata atgtctgatt tcagaacaag aaagtaattc tcaataccaa 2400 ggaaatggag tggggtagac agctagtaat taaactcact tgtgcgttaa aaagaaatta 2460 aggaaaaaaa gaaaatgaga gaacatatta ctaaataagg aaagcacaca ttaaatattt 2520 gctatagttt cacactaaga gaataaagga aatgcaataa agtggcctga aaagtaaagg 2580 atgagatgtg taaagaggcg gggaaagatg tgtcattttt tttactatga gcagcaatct 2640 gagaagataa aggaatgggc aaacgtgatg tttgatcagt gttatttgtt ttcaaggcct 2700 gcctactttt tttttcaaat attacaaatt tttgaagtaa cattcttttt gttttttgct 2760 gtctgttact agattctata aagtaaattc tataaagtaa attatgttac acattctata 2820 aaggcaggga ccatggtatg ttgtttatct ttggattctc agtgattgtc aaatttatat 2880 ttgttgaatg aaccttgatc caagacttgg actccaggta tctttccact ctggttccaa 2940 ggagggacct tcctcatggt ggacgtgctg tgtggtctca catctcactc ctatgtcttt 3000 tcctgtctgt tactgccctc agtggagccc acagtgacca tctccccatc caggacagag 3060 gccctcaacc accacaacct gctggtctgc tcggtgacag atttctatcc aggccagatc 3120 aaagtccggt ggtttcggaa tgaccaggag gagacagctg gcgttgtgtc cacccccctt 3180 attaggaacg gtgactggac cttccagatc ctggtgatgc tggaaatgac tccccagcat 3240 ggagacgtct acacctgcca cgtggagcac cccagcctcc agagccccat caccgtggag 3300 tggcgtaagg ggatattgag tttctgttac tatgggcccc acaagacaaa gagctccttc 3360 tgatccattc cttcccatct cttatccctg atgtcactac tgagctggga atcacagaag 3420 actagacatc tcttgctcca tggcaagtgc atcagaagaa tcctgatctc atcacctttc 3480 cagatgctag ggaaattact ctacgtactg ttgctctaga tcccagtccc gacagctctc 3540 agggactgat tcttagggct ggtgattgag atcttagggt ctaaggttat ggatgagttc 3600 ctgaggagca gagacttact tccctactct ctcacctact cactgtatcc aaggacctat 3660 tggctttctc tcccttacgg gtggtctgaa tggaggacta gcttcctttg acgccttcac 3720 ctcctgcacc tcagactgga cttcagctcc tcagcaggga tgctatgggg tgtggagaca 3780 aacactgaca ctcaggctgt actccttagg ggctcagtct gaatctgccc agaacaagat 3840 gctgagtggc attggaggct tcgtgctggg gctgatcttc ctcgggctgg gccttatcat 3900 ccgtcaaagg agtcagaaag gtgaggaacc ctggaggaaa aggggaagat gggctgcgac 3960 ccagaccctt tgttcagaga ggtcctgtct ttggacgtag ctctttcctc ctgaccctga 4020 gaggaagaag gctaggctgg aggtgggagg agacaggaca agattggaaa aggcattgga 4080 atctgatttt actggttgaa aggtagccct gtcacagagc tgactgatag agcttattgc 4140 aggacaccct taccatttat cattgtctca ctggctcctt tccaaaagct tcctccatta 4200 agagggtcag agcctcggcc tccttgcctt ctagtgaaaa tttcctttgt tttaggggat 4260 tttaaattag ggtgcttaag gccttgaaga acatgggtgg gaagagaata taactaatta 4320 agtcatgtgt gtcattttcc tttgggatga gagagtgtct gtttgtgtaa tgagaccttt 4380 ctctgcataa cttccttttg taggacctca agggcctcca ccagcaggta atatttcagc 4440 catgatccag tatagggagg acacaggtat aagggggaag agcataagct gagtggacct 4500 gaccacatga tctctgttca tggcctgttt gctgctatga ggatcaagac ttacgggaga 4560 agtttgccag tttctgggaa tctccagagg ttgttcccca gaaccaagcc ttaactttgg 4620 tggcatcttc ttgtgaaatg tggagccaga accacagctt aaatgttaca tactaggatg 4680 atgcccactt tgtgccacac tttgttggct actgcctgta ggcattttcc agtgactgaa 4740 agaggccact agtggtggag atgaggtatc atccaatttc ctaaaaagac tgaacccttc 4800 atattcccca gaagaataac agctgttccc cgacttccca cacatctgca tcaagctgaa 4860 gttctgtgtc ctcatgagct gatttcatct ttgcacagat cttaggggag gtgatgatga 4920 tataccctgg acctcaactt tctctgtctg aagctgcagg gggcccctga ggggtggggg 4980 agatggcagg cccgccagca taccctgtgc tgatcactcc tcttctctct tctccagggc 5040 ttctgcactg actcctgaga 5060 //