Dbfetch

Dbfetch

ID   MW013132; SV 1; linear; genomic DNA; STD; HUM; 1101 BP.
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AC   MW013132;
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DT   03-MAY-2021 (Rel. 144, Created)
DT   03-MAY-2021 (Rel. 144, Last updated, Version 1)
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DE   Homo sapiens isolate 5771900061 MHC class II antigen (HLA-DRB1) gene,
DE   partial cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-1101
RA   You X., Zhang W., Zhu F.;
RT   "A novel HLA-DRB1 allele was identified";
RL   Unpublished.
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RN   [2]
RP   1-1101
RA   You X., Zhang W., Zhu F.;
RT   ;
RL   Submitted (17-SEP-2020) to the INSDC.
RL   Hla Laboratory, Transfusion Institute, Blood Center of Zhejiang Province,
RL   Jianye Road 789, Hangzhou, Zhejiang 310052, China
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DR   MD5; 26be095762b60c1588722471ad535139.
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CC   ##Assembly-Data-START##
CC   Assembly Method       :: TypeStream Visual Software v. 1.2.0
CC   Sequencing Technology :: IonTorrent
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..1101
FT                   /organism="Homo sapiens"
FT                   /isolate="5771900061"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>1101
FT                   /gene="HLA-DRB1"
FT   mRNA            join(<1..270,371..652,753..863,964..987,1088..>1101)
FT                   /gene="HLA-DRB1"
FT                   /product="MHC class II antigen"
FT   CDS             join(<1..270,371..652,753..863,964..987,1088..1101)
FT                   /codon_start=3
FT                   /gene="HLA-DRB1"
FT                   /product="MHC class II antigen"
FT                   /protein_id="QUF99615.1"
FT                   /translation="RFLWQPKRECHFFNGTERVRFLDRYFYNQEESVRFDSDVGEFRAV
FT                   TELGRPDAEYWNSQKDILEQARAAVDTYCRHNYGVVESFTVQRRVQPKVTVYPSKTQPL
FT                   QHHNLLVCSVSGFYPGSIEVRWFLNGQEEKAGMVSTGLIQNGDWTFQTLVMLETVPRSG
FT                   EVYTCQVEHPSVTSPLTVEWRARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGH
FT                   SGLQPTGFLS"
FT   variation       808
FT                   /gene="HLA-DRB1"
FT                   /replace="g"
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SQ   Sequence 1101 BP; 156 A; 179 C; 225 G; 141 T; 400 other;
     cacgtttcct gtggcagcct aagagggagt gtcatttctt caatgggacg gagcgggtgc        60
     ggttcctgga cagatacttc tataaccagg aggagtccgt gcgcttcgac agcgacgtgg       120
     gggagttccg ggcggtgacg gagctggggc ggcctgacgc tgagtactgg aacagccaga       180
     aggacatcct ggagcaggcg cgggccgcgg tggacaccta ctgcagacac aactacgggg       240
     ttgtggagag cttcacagtg cagcggcgag nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnnnnnnnn tccaacctaa ggtgactgta tatccttcaa agacccagcc cctgcagcac       420
     cacaacctcc tggtctgctc tgtgagtggt ttctatccag gcagcattga agtcaggtgg       480
     ttcctgaacg gccaggaaga gaaggctggg atggtgtcca caggcctgat ccagaatgga       540
     gactggacct tccagaccct ggtgatgctg gaaacagttc ctcgaagtgg agaggtttac       600
     acctgccaag tggagcaccc aagcgtgaca agccctctca cagtggaatg gannnnnnnn       660
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       720
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nngagcacgg tctgaatctg cacagagcaa       780
     gatgctgagt ggagtcgggg gctttgtcct gggcctgctc ttccttgggg ccgggctgtt       840
     catctacttc aggaatcaga aagnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       900
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       960
     nnngacactc tggacttcag ccaacagnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1020
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1080
     nnnnnnngat tcctgagctg a                                                1101
//