Dbfetch
ID MT797918; SV 1; linear; genomic DNA; STD; HUM; 6879 BP. XX AC MT797918; XX DT 18-AUG-2020 (Rel. 144, Created) DT 18-AUG-2020 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens MHC class II antigen (HLA-DQB1) gene, HLA-DQB1*02 null allele, DE complete sequence. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-6879 RA Mazzocco M.; RT ; RL Submitted (22-JUL-2020) to the INSDC. RL Support, GenDx, Yalelaan 48, Utrecht 3584 CM, Netherlands XX DR MD5; da78692a07ce2f770b9cbcf6b63e9f7b. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 2.16.2.16030 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..6879 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene 33..6781 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02 null" FT /note="MHC class II antigen" FT variation 100 FT /gene="HLA-DQB1" FT /replace="c" FT /note="introduces premature stop codon" XX SQ Sequence 6879 BP; 1728 A; 1582 C; 1675 G; 1894 T; 0 other; tgttgactac cacttttccc ttcgtctcaa ttatgtcttg gaaaaaggct ttgcggatcc 60 ccggaggcct tcgggcagca actgtgacct tgatgctgta gatgctgagc accccagtgg 120 ctgagggcag agactctccc ggtaagtgca gggcagctgc tctccagagc cgctactctg 180 ggaacaggct ctccttgggc tggggtacgg ggatggtgat ctccataatc tcggacacaa 240 tcttttatca acatttcctc tgttttggga aagagagcta tgttgcattt ccatttatct 300 tttaatgatg aagtgaggac aatccaatcc catcctacag gcttaagcct ggaagaggag 360 gagagaggag agaaaagagg agacaaagtg ttcatttact accagtgata ggacaaagtg 420 agcatggggt tatttttgaa gatatgaatt tctccaaaga cacagcagga tttgccattt 480 aggcgtgtcc caagacttgc ctggactaaa tattatgatt tcctgcattg ggaaatgcaa 540 ggcagcaatg gtgtctgtag tctccgtatt tggggaaaag ttgtctgtat tcctgaccca 600 gtggagcgtt tgtggaggca aaatcttggt actgagggaa gctgactggc tgaccacaga 660 aagagagcct tcaggtttca ctgatttatg ggcaaatggt gacctgagtg ggattcagat 720 acccgagttg atgatggact aaatttagta gaaaggagga tgtaaagaag ggaaataaca 780 catactgtga aaccactcat ttcagacaca gaacaatact ttacataaat tctctctcac 840 tccttctaac atcctgtgtg tagatatcat gattttcttt tacacaatta tacttgtgat 900 atggatattc tgttacataa actgcccggg ctggtgactg ccacagttta atgggaatct 960 agtttatcaa attcaaaagc ttgtgctctt tcggtgaata aatgtttctt tctaggactc 1020 agagatctag gactcccttc tttctaacac agacgtgagt gaacctcaca gggcacttgg 1080 gagggtaaat ccaggcatgg gaaggaaggt attttaccca gggaccaaga gaataggcgt 1140 atcggaagag gacaggttta attcctggac ctgtctcgtc attcccttga actgtcaggt 1200 ttatgtggat aactttatct ctgaggtacc caggagctcc atggaaaatg agatttcatg 1260 cgagaacgcc ctgatccctc taagtgcaga ggtccatgta aaatcagccc gactgcctct 1320 tcacttggtt cacaggccga gacagggaca gggctttcct ccctttcctg cctgtaggaa 1380 ggcggattcc cgaagacccc cgagagggcg ggcagggctg ggcagagccg ccgggaggat 1440 cccaggtctg cagcgcgagg cacgggccgg cgggaacttg tggtcgcgcg ggctgttcca 1500 cagctccggg ccgggtcagg gtggcggctg cgggggcgga cgggctgggc cgcactgact 1560 ggccggtgat tcctcgcaga ggatttcgtg taccagttta agggcatgtg ctacttcacc 1620 aacgggacag agcgcgtgcg tcttgtgagc agaagcatct ataaccgaga agagatcgtg 1680 cgcttcgaca gcgacgtggg ggagttccgg gcggtgacgc tgctggggct gcctgccgcc 1740 gagtactgga acagccagaa ggacatcctg gagaggaaac gggcggcggt ggacagggtg 1800 tgcagacaca actaccagtt ggagctccgc acgaccttgc agcggcgagg tgagcggcgt 1860 cgcccctctg cgaggcccac ccttggcccc aagtctctgc gccaggaggg gcgaagggtc 1920 gtggcctctg gaacctgagc cccgtttgtt ccaccccaga ggacaggagg cagcggcgag 1980 agtggtgggg gcaggtgcat cggaggtgcg gggacctagg gcagagcagg gggacaggca 2040 gagttggcca ggctgcctag tgtcgcccca gcctacccgt tcgtcggcct tgtcctctgc 2100 tctgcatgtt cttgcctcgt gccttatgca tttgcctcct tttgccttac ctttgctaag 2160 cagctctctc tgctcagaat gcccgccctc ttcccctgcc cgcccgcccg ccccactagc 2220 actgccccac ccagcaaggc ccacgtgcac agctcttgca gcaggaagct tcaggcttag 2280 cctggtggag ttagggctgt tccacaactg cgcgcaggac attcagcaat tacagttgtg 2340 aaataagata ttttaacttt tggcttcaaa tcattattca tcgtaattct gttttcttaa 2400 atggctctca ttcatggcag agatctttga ggtgagggtg ttttaatcat tgcatgccta 2460 gtacctgaca cattgactgg tatgtggtgt gagctcaatg atcttctgtt aaattaatga 2520 ataaatgtac tcagctgccc atccacttag gctcaagaaa aaaaaagagg taaacagagc 2580 cttaaaaatg gactttatta attattttct ataattttgc ttaatgcttt aaagtaaact 2640 cttattgact tggatcttaa tagagtttgt gaatacaaaa tctgaggaaa aaagtttttg 2700 ctaaaaataa aaacaacgct tgaaagatat tgtaaggcag tttaaatttc ttttcttttc 2760 tttttttttt ttttttgaga cggattctca ctctgtcgcc caggccggag tgcagtggcg 2820 cgatctcggc tcactgcaag ctccgcctcc cgggttcacg ccattctcct gcctcagcct 2880 cctgagtagg tgggattaca ggcgcgtgcc accacgcccg gctaattttt ttgtattttt 2940 agtagaggcg gggtttcacc gtgttagcca ggatggtctg gatctcctga cctcatgatc 3000 cgcccgcctc ggcctcccaa agtgctggga ttacaggtgt gagccacagt gcccggccgg 3060 cacttttaat ttcttagaaa agctgaacaa atggcacaat gcaaagagca aaagttttgg 3120 aataaataga ttgaagccat taaattattg gataaaaata gtttcgggtt gcttttggcc 3180 taggttctcc cctcccccca tgactatcca cttcaggaat aaacattctg aaagtcaatt 3240 ttacccattt agtgagcatt tatttctaga cagttgcctt atcaaatacc atctatgtta 3300 cgtcatttaa tctcacagtt acttgtgcat cagagattag catcaccact ttatatattg 3360 gtacatgata aacactttat tggtcatgga tggggagatg gtcactgtag gctaatattg 3420 gtacatgata aacactttaa gtaatcagcc cataattgct caccaagacc ttaagcctcc 3480 caaagtacac aacattcttt gtgttcttca ctacacatcc atagagtcta agggacgtaa 3540 agcctcgtta aagccagttt tgaccagaag cagcaatgag tctattcctg tgtgttttcc 3600 atgttaatgg gacaaaatga tactttcaag gcattgaaaa ttcatgatta atcaatccct 3660 agtctgaccc cagtgttatc tatgcaggtt tgcaaaacct ttagtttact taatactccc 3720 ttgccttctt ttgattcaca tcctaatgcc agcaaatact tatgtttttg ctatttcagt 3780 tccatttcca taaaatttat tttatcatct tttctcataa atttatgccc tctattttta 3840 ctcccaatct gtttaagatg aacaaatctt ataaggccac atagctgact gttatttctg 3900 ttggactcca ggaaggagaa cctaaagaaa agttcaagtc caagcagaaa ccgtgatttc 3960 ttccagatga tggctcatga gtgccattta attggggtgc cacctggtga cctcagcaaa 4020 tcccagctat atttatgtgt tcacattaca ggatcattaa cccagaccga ccactgcaca 4080 gatctcagaa tattttctat ggagaacata cataataatg cctgatttca gaagaagaaa 4140 gtaattctca atagcaaggg gatggagtag ggtagacagc tgtaattaaa ctcacttgtg 4200 tgataaaaag aaattaagga aaaaagaaaa tgagagaaca tattactaaa taaagaaagc 4260 atacattaaa tatttactat agtttcacac taagagaata aaggaaatgc aataaagtgg 4320 cctgaaaggt aaaggatgag atgtgtaaag gggtgtagta tttttactat gagcagcaat 4380 ctgagaagat aaaggaatcg agttacgggc aaacatgatg tttgatcagt gttatttgtt 4440 ttcaaggcct gcctaaattt ttttcaaata ttacaaactt ttgaaataac attctttttg 4500 ttttttgctg tctgttacta ggttgcacat tttataaagg cagggaccat ggtatgttgt 4560 ttgtctttgg attctcagtg attgttatat ttatatttgt tgaaggaacc ttaatccaag 4620 acttggactc caagtatctt tccactctgg ttccaaggag ggaccttcct cacagcaggc 4680 atgctgtgtg gtctcacatc tcactcctat atctttccct gtctgttact gccctcagtg 4740 gagcccacag tgaccatctc cccatccagg acagaggccc tcaaccacca caacctgctg 4800 gtctgctcgg tgacagattt ctatccagcc cagatcaaag tccggtggtt tcggaatgac 4860 caggaggaga cagctggcgt tgtgtccacc ccccttatta ggaatggtga ctggaccttc 4920 cagatcctgg tgatgctgga aatgactccc cagcgtggag acgtctacac ctgccacgtg 4980 gagcacccca gcctccagag ccccatcacc gtggagtggc gtaaggggat attgagtttc 5040 tgttactgtg ggccccacaa gacaaaggac agagctcctt ctgacccatc ccttcccatc 5100 tcttatccct gatgtcactg ctgagctggg aatcacagga gactagagca cctctagttc 5160 catggcgagt gcatcagaag aatcctgatc tcatcacctt tccagatgct agggaaatta 5220 ctctacatac tgttgctctg gatcccagtc ctgattgctc tgaggaactg attattaggg 5280 ctggtgactg ggatcttagg gtctaagttt atggatgagt tcctgaggag tggagatctg 5340 cttccccact ctgtcaccta ctcactgtat ccaaggacct attggctggc ctttccctcc 5400 cttaggggtg gtctgaatgg agaactaggt tcctttgatg ccttcacctc ctgcatctca 5460 gactggactt cagctcctca tcagggaaac tatggggtat ggggacaaac actgacactc 5520 aggctctgct tctcaggggc tcaatctgaa tctgcccaga gcaagatgct gagtggcatt 5580 ggaggcttcg tgctggggct gatcttcctc gggctgggcc ttatcatcca tcacaggagt 5640 cagaaaggtg aggaacccca ggggaaaagg ggaagatggc ctgtgaccca gaccctctgt 5700 tcagagaggt cctgtctcta gatgtagctc tttcctcctg accctgagag gaagaaagct 5760 gagctggaag tggaaggaga caggacaagg ttggaggagg cattggaatc tgattttact 5820 agctgaaggg tagccctgtc acagagctga ctgatagagc ttattccagg gcatccttac 5880 cattcatcat tgtctcactg gctcctttcc aaaaacttcc tccattaaga gggtcagagc 5940 ctcggcctcc ttgccttcta gtgacaattt cctttatttt aggggatttt aaattagggt 6000 gcttaaggac ttgaagaaca tgaatgggaa gagaatataa ctctaattaa gtcacatgtg 6060 tcattttcct ttggggtgag agagtggctg ttcatgtaat gagacctttc tctgcataac 6120 ttccttttgt aagacctcaa gggcctccac cagcaggtaa tatttcagcc gtgatccagt 6180 gtggggaggg cacaggtgta agagggaaga gcatgagctg agtgtacctg acagtagtgg 6240 tctctgttca tggtatattt gctgctatga ggatcaagac ttaggggtga agtttgccag 6300 tttctaggaa tctccagagg ttgttcccca gaaccaagcc ttaactttgg tggtatcttc 6360 ctgttaaatg tggagccaga accacggctt aaatgttaga cactaggatg atgcccactt 6420 tgtgccacat gatggtggct actgcctgta ggcattttcc agtgactgaa agaggctgct 6480 agtggtaggg atgaggtatc atccaatttc ctaaaaagat tgaacccttc atattcacca 6540 gaagagtaac agctgttccc ccacctccca cacatctgca tcaagctgaa gttctgtgtc 6600 ttcatgagct gatttcacct ttgcacagat cttgggggag gtgatgacaa tacactctgg 6660 acctcagctt tgtctgtctg aagctgcagg aggcccctga ggggtgggga agatggcagg 6720 cccaccagcg taccctgtgc tgatcatccc tcttctctct tcttcagggc tcctgcactg 6780 actcctgaga ctattttaac tgggattggt tatcactttt ctgtaacgcc tgcttgtccc 6840 tgcccagaat tcccagctgt ctgtgtcagc ctgtccccc 6879 //