Dbfetch
ID MT776878; SV 1; linear; genomic DNA; STD; HUM; 1533 BP. XX AC MT776878; XX DT 25-JAN-2021 (Rel. 144, Created) DT 10-MAR-2021 (Rel. 144, Last updated, Version 2) XX DE Homo sapiens clone 111394987 MHC class II antigen (HLA-DPA1) gene, DE HLA-DPA1*01:03:01:04var allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1533 RA Gomez-Massa E.; RT ; RL Submitted (16-JUL-2020) to the INSDC. RL Histocompatibility and Immunogenetics Laboratory, Blood and Tissue Bank, RL Edifici Frederic Duran i Jorda. Passeig del Taulat 106-116, Barcelona RL 08005, Spain XX DR MD5; 9d9acf8541068b0c5e57883b3d2590c3. XX CC ##Assembly-Data-START## CC Assembly Method :: GenDx (NGS engine) v. IMGT 3.38.0. CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1533 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="111394987" FT /db_xref="taxon:9606" FT gene <1..>1533 FT /gene="HLA-DPA1" FT /allele="HLA-DPA1*01:03:01:04var" FT mRNA join(<367..612,953..1234,1449..>1533) FT /gene="HLA-DPA1" FT /allele="HLA-DPA1*01:03:01:04var" FT /product="MHC class II antigen" FT CDS join(<367..612,953..1234,1449..>1533) FT /codon_start=3 FT /gene="HLA-DPA1" FT /allele="HLA-DPA1*01:03:01:04var" FT /product="MHC class II antigen" FT /protein_id="QQP27551.1" FT /translation="DHVSTYAAFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEF FT GQAFSFEAQGGLANIAILNNNLNTLIQRSNHTQAANDPPEVTVFPKEPVELGQPNTLIC FT HIDKFFPPVLNVTWLCNGELVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVE FT HWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGI" XX SQ Sequence 1533 BP; 328 A; 428 C; 340 G; 437 T; 0 other; tgaaatatgt aaagtattta gaaggatgcc tggcacaagt aagtgctcaa caaatgttag 60 ctgtcattgt tactattact attgtgtagg gtcaggatgc ccagactttc aaagaccagg 120 aagcagcttg acttatcagt gataaacttt tcattttgtt ctttgctcct ttctttttat 180 aactgctcat ctgctctgta ttatttcctt tatggtgttg ctccttcttc ttccccatat 240 gtccttcctt tgacctctta ccttcttcct ttttatattc ataagtcttt attcattctc 300 tagctttgac cacttgcata ttcaaactga cattttgtcg tgtttttctc tactgtcttt 360 atgcagcgga ccatgtgtca acttatgccg cgtttgtaca gacgcataga ccaacagggg 420 agtttatgtt tgaatttgat gaagatgaga tgttctatgt ggatctggac aagaaggaga 480 ccgtctggca tctggaggag tttggccaag ccttttcctt tgaggctcag ggcgggctgg 540 ctaacattgc tatattgaac aacaacttga ataccttgat ccagcgttcc aaccacactc 600 aggccgccaa tggtactgcc tatctttgcc tcttcctctg tagcccaact ggaagggatg 660 agagggcctc tctgccaccc tcagactagg aagcctaagt gccccctgct gtgtgatcct 720 cttcccctag tggccatggg ctgatcccac tacagcaagg gcttgcatcc tctcttctca 780 ggagagagaa aggtgagcag agtgaggctg gtcagtggtg tgatacccct ctctgtgatt 840 cagagctgcc ataaaatcta aggctgaggt agaggaccac cctcccctaa gaggtggagc 900 ctttgtgatt catcccagaa gaggggccta acctggtgct gtctccttcc agatccccct 960 gaggtgaccg tgtttcccaa ggagcctgtg gagctgggcc agcccaacac cctcatctgc 1020 cacattgaca agttcttccc accagtgctc aacgtcacgt ggctgtgcaa cggggagctg 1080 gtcactgagg gtgtcgctga gagcctcttc ctgcccagaa cagattacag cttccacaag 1140 ttccattacc tgacctttgt gccctcagca gaggacttct atgactgcag ggtggagcac 1200 tggggcttgg accagccgct cctcaagcac tggggtatgc aactgctttt ctctccataa 1260 tctcctggca tcctctattc caaagacctg gtgtcctctg caccagcttt ccgcactggc 1320 tgggtctcag tcctctcctc gtcctaacat ccaattaact ggtccataac cttcaattcc 1380 cacaaccatc ccaggccatc accaccctca ctgcacctcc tgaccctatc tcttcattct 1440 tcccccagag gcccaagagc caatccagat gcctgagaca acggagactg tgctctgtgc 1500 cctgggcctg gtgctgggcc tagtcggcat cat 1533 //