Dbfetch
ID MT604101; SV 1; linear; genomic DNA; STD; HUM; 3349 BP.
XX
AC MT604101;
XX
DT 25-JAN-2021 (Rel. 144, Created)
DT 10-MAR-2021 (Rel. 144, Last updated, Version 2)
XX
DE Homo sapiens isolate 111360283 MHC class I antigen (HLA-C) gene,
DE HLA-C*0202var allele, complete cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-3349
RA Gomez-Massa E.;
RT ;
RL Submitted (09-JUN-2020) to the INSDC.
RL Histocompatibility and Immunogenetics Laboratory, Blood and Tissue Bank,
RL Edifici Frederic Duran i Jorda. Passeig del Taulat 106-116, Barcelona
RL 08005, Spain
XX
DR MD5; 5b06a4cf22fd88d09b440987ee35ea0b.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: GenDx (NGS engine) v. IMGT 3.38.0.
CC Sequencing Technology :: Illumina
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..3349
FT /organism="Homo sapiens"
FT /isolate="111360283"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <295..>3187
FT /gene="HLA-C"
FT /allele="HLA-C*0202var"
FT mRNA join(<295..367,498..767,1013..1288,1876..2151,2273..2392,
FT 2832..2864,2972..3019,3183..>3187)
FT /gene="HLA-C"
FT /allele="HLA-C*0202var"
FT /product="MHC class I antigen"
FT CDS join(295..367,498..767,1013..1288,1876..2151,2273..2392,
FT 2832..2864,2972..3019,3183..3187)
FT /codon_start=1
FT /gene="HLA-C"
FT /allele="HLA-C*0202var"
FT /product="MHC class I antigen"
FT /protein_id="QQP18441.1"
FT /translation="MRVMAPRTLLLLLSGALALTETWACSHSMRYFYTAVSRPSRGEPH
FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVNLRK
FT LRGYYNQSEAGSHTLQRMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA
FT AQITQRKWEAAREAEQWRAYLEGECVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE
FT ATLRCWALGFYPTEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG
FT KGGSCSQAASSNSAQGSDESLIACKA"
XX
SQ Sequence 3349 BP; 634 A; 978 C; 1043 G; 694 T; 0 other;
aggagaagag ggatcaggac gaagtcccag gtcccgggcg gggctctcag ggtctcaggc 60
tccaagggcc gtgtctgcac tggggaggcg ccgcgttgag gattctccac tcccctgagt 120
ttcacttctt ctcccaacct gcgacgggtc cttcttcctg aatactcatg acgcgtcccc 180
aattcccact cccattgggt gtcgggttct agagaagcca atcagcgtct ccgcagtccc 240
ggttctaaag tccccagtca cccacccgga ctcggattct ccccagacgc cgagatgcgg 300
gtcatggcgc cccgaaccct cctcctgctg ctctcgggag ccctggccct gaccgagacc 360
tgggcctgtg agtgcggggt tgggagggaa acggcctctg cggagaggag cgaggggccc 420
gcccggcgag ggcgcaggac ccggggagcc gcgcagggag gagggtcggg cgggtctcag 480
cccctcctct cccccaggct cccactccat gaggtatttc tacaccgctg tgtcccggcc 540
cagccgcgga gagccccact tcatcgcagt gggctacgtg gacgacacgc agttcgtgcg 600
gttcgacagc gacgccgcga gtccaagagg ggagccgcgg gcgccgtggg tggagcagga 660
ggggccggag tattgggacc gggagacaca gaagtacaag cgccaggcac agactgaccg 720
agtgaacctg cggaaactgc gcggctacta caaccagagc gaggccggtg agtgaccccg 780
gcccggggcg caggtcacga cccctcccca tcccccacgg acggcccggg tcgccccgag 840
tctccgggtc tgagatccac cccgaggctg cggaacccgc ccagaccctt gaccggagag 900
agccccagtc acctttaccc ggtttcattt tcagtttagg ccaaaatccc cgcgggttgg 960
tcggggctgg ggcggggctc gggggacggg ctgaccacgg gggcggggcc agggtctcac 1020
accctccaga ggatgtacgg ctgcgacctg gggcccgacg ggcgcctcct ccgcgggtat 1080
gaccagtccg cctacgacgg caaggattac atcgccctga acgaggacct gcgctcctgg 1140
accgccgcgg acacagcggc tcagatcacc cagcgcaagt gggaggcggc ccgtgaggcg 1200
gagcagtgga gagcctacct ggagggcgag tgcgtggagt ggctccgcag atacctggag 1260
aacgggaagg agacgctgca gcgcgcgggt accaggggca gtggggagcc ttccccatct 1320
cctgtagatc tcccgggatg gcctcccacg aggaggggag gaaaatggga tcagcgctag 1380
aatatcgccc tcccttgaat ggagaatggg atgagttttc ctgagtttcc tctgagggcc 1440
ccctctgctc tctaggacaa ttaagggatg aagtccttga ggaaatggag gggaagacag 1500
tccctggaat actgatcagg ggtccccttt gaccactttg accactgcag cagctgtggt 1560
caggctgctg acctttctct caggccttgt tctctgcctc acgctcaatg tgtttgaagg 1620
tttgattcca gcttttctga gtccttcggc ctccactcag gtcaggacca gaagtcgctg 1680
ttcctccctc agagactaga actttccaat gaataggaga ttatcccagg tgcctgtgtc 1740
caggctggcg tctgggttct gtgccccctt ccccacccca ggtgtcctgt ccattctcag 1800
gatagtcaca tgggcgctgt tggagtgtcg caagagagat acaaagtgtc tgaattttct 1860
gactcttccc gtcagaacac ccaaagacac acgtgaccca ccatcccgtc tctgaccatg 1920
aggccaccct gaggtgctgg gccctgggct tctaccctac ggagatcaca ctgacctggc 1980
agcgggatgg cgaggaccaa actcaggaca ccgagcttgt ggagaccagg ccagcaggag 2040
atggaacctt ccagaagtgg gcagctgtgg tggtgccttc tggagaagag cagagataca 2100
cgtgccatgt gcagcacgag gggctgccgg agcccctcac cctgagatgg ggtaaggagg 2160
gggatgaggg gtcatgtgtc ttctcaggga aagcagaagt cctggagccc ttcagctggg 2220
tcagggctga ggcttggggg tcagggcccc tcaccttccc ctcctttccc agagccatct 2280
tcccagccca ccatccccat cgtgggcatc gttgctggcc tggctgtcct ggctgtccta 2340
gctgtcctag gagctgtggt ggctgttgtg atgtgtagga ggaagagctc aggtagggaa 2400
ggggtgagga gtggggtctg ggttttcttg tcccactggg agtttcaagc cccaggtaga 2460
agtgtgcccc acctcgttac tggaagcacc atccacacat gggccatccc agcctgggac 2520
cctgtgtgcc agcacttact ctgttgtgaa gcacatgaca atgaaggaca gatgtatcac 2580
cttgatgatt atggtgttgg ggtccttgat tccagcattc atgagtcagg ggaaggtccc 2640
tgctaaggac agaccttagg agggcagttg ctccagaacc cacagctgct ttccccgtgt 2700
ttcctgatcc tgccctgggt ctgcagtcat agttctggaa acttctcttg ggtccaagac 2760
taggaggttc ccctaagatt gcatggccct gcctcctccc tgtcccctca cagggcattt 2820
tcttcccaca ggtggaaaag gagggagctg ctctcaggct gcgtgtaagt gatggcggca 2880
ggcgtgtgga ggagctcacc caccccataa ttcctcttgt cccacatctc ctgcgggctc 2940
tgaccaggtc tttttttttg ttctacccca gccagcaaca gtgcccaggg ctctgatgag 3000
tctctcatcg cttgtaaagg tgagattctg ggagctgaag tggtcggggg tggggcagag 3060
ggaaaaggcc taggtaatgg ggatcctttg atagggacgt ttcgaatgtg tggtgagctg 3120
ttcagagtgt catcacttac catgactgac ctgaatttgt tcatgactat tgtgttctgt 3180
agcctgagac agctgcctgt gtgggactga gatgcaggat ttcttcacac ctctcctttg 3240
tgacttcaag agcctctggc atctctttct acaaaggcat ctgaatgtgt ctgcgttcct 3300
gttagcataa tgtgaggagg tggagagacc agcccacccc cgtgtccac 3349
//