Dbfetch
ID MT427603; SV 1; linear; genomic DNA; STD; HUM; 3721 BP.
XX
AC MT427603;
XX
DT 17-JUN-2020 (Rel. 144, Created)
DT 17-JUN-2020 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens isolate HLAJ013 MHC class I antigen (HLA-J) pseudogene,
DE partial sequence.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-3721
RA Edwards J.A., Sayer D.C., Hogan H.M., Newbound C., Dallas P., Kolanski S.,
RA Timler S., Madden L.;
RT ;
RL Submitted (03-MAY-2020) to the INSDC.
RL R&D, CareDx Pty Ltd, 20 Collie St, Fremantle, Western Australia 6160,
RL Australia
XX
DR MD5; 2146aef9c4ea5220a294542e2b4e63b3.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: AlloSeq Assign v. v1.0.0.1146
CC Sequencing Technology :: AlloSeq Tx Hybrid capture
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..3721
FT /organism="Homo sapiens"
FT /isolate="HLAJ013"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>3721
FT /gene="HLA-J"
FT /note="MHC class I antigen"
FT /pseudogene="unknown"
XX
SQ Sequence 3721 BP; 721 A; 1057 C; 1145 G; 798 T; 0 other;
gctccctggg gtgagttttc tttttgaaga gtccagggga acaggtaagc agtggggaag 60
cagggagtcc atttcaggga caggaattcc cggatgaaaa gtgaagggag agggaagggg 120
gcccaagccg agggtttctt cctggtttct cggacagctc ctggaccaag actcagggaa 180
cattgagaca gagcgtttgt cacaggagga gcggggtcag ggcgaagtcc cagagcccca 240
ggcatggctc tcagggtccc aggccccgaa ggcggtgcat ggactgggga ggtgcagcat 300
tggggattcc ccatctccgc agagtttctc ttctccctct cccagcctgc gacgggtcct 360
tcttcctgga cactcacgac gcggacccag ttctcactcc cactgagtgt cgggtttcta 420
gggaagccaa tcagcgtcgc gcggccccgg ttctaaagtc cccacgcacc caccgggact 480
cggagtctcc ccagacgccg acgatggggt catggcgccc cgaaccctcc tcctgctgct 540
ctcggggacc ctggccctgg ccgagacctg ggcgggtgag tgcggggtca ggagggaaac 600
ggcctctgcc gtgaggagcg aaaggtccgc ctggctgggg cgcaggaccc ggggagccgc 660
gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc cccaggctcc cactccatga 720
ggtatttcag caccgcggtt tcctggccgg gccgcgggga gcccagcttc attgccgtgg 780
gctacgtgga cgacacgcag gtcgtgcggg tcgacagtga cgccgtgagt ctgaggatga 840
agacgcgggc gcggtgggtg gagcaggagg ggccggagta ttgggaccta cagacactgg 900
gcgccaaggc ccaggcacag actgaccgag tgaacctgcg gaccctgctc cgctactaca 960
accagagcga ggcgggtgag tgaccccggc ccggggcgca gatcacttac tccccgctcc 1020
atgcctcacg gacggccctg gtcccctgag tctccgggtc caagatcgac cccgaggctg 1080
cgggacctgc agagatcctc gacccgggag agccccaggc gcctttacct ggtttcatct 1140
tcagttgagg ccaaaatctc cgcaggttgc taggggcggg gccggggctc ggtgggcggg 1200
gctgaccgcg ggaactgggc ctgcgtatca catcctccag ggaatgtttg gctgcgacct 1260
ggggcccgac gggcgtctcc tccgcgggta tgagcagtat gcctacgacg gcaaggatta 1320
catcgccctg aacgaggacc tgcgctcctg gaccgccgcg gataccgcgg ctcagattac 1380
ccagcgcaag tatgaggcgg ccaatgtggc tgagcaaagg agagcctacc tggagggcac 1440
ctgcatggag tggctccgca gacacctgga gaacgggaag gagacgctgc agcgcgcggg 1500
taccaggggc catggggagc ctgctcgatc tcctgtagat ctcccgggct ggcctcgcac 1560
aaggagggga agaaaatgga aacaccacca gaatatcgcc ctccctcctg tcctgacgga 1620
gaggaatcct cctgggtttc cagatcctgt atcagagatt gactctgagg gcccaccctg 1680
ctcttcctgg gacaattaag ggatgaagtc tctgaaggag tggaggggaa gacaatccct 1740
ggaagactga tccgcggtcc cctttcaccc cacagcaacc ttgggcacca ggacttttcc 1800
tcccgggcct tgttctctgc ctcacactca atgtgtcgga gtctgactcc agctcctctg 1860
agtcccttgg cctccactca gatcaggacc agaagtccct gctaccctgc tcagagacta 1920
gaactttcca aggaatagga gattatccca ggcgcctgtg tcgaggctgg tgtctgggct 1980
ctgtgctccc ttccccaccc caggtgtcct attcatcagg atggtcacat gggcgctgct 2040
ggggtgtccc atgaggaatg caaagtgcct gagttttctg actcttcctt tcagaccccc 2100
ccaagacaca cgtgacccac caccctgtct ctgaacatga ggcataacga ggtgctgggt 2160
tctgggcttc taccctgcgg agatcacatt gacctggcag cgggatgggg aggaccagac 2220
ccaggacatg gagctcgtgg agaccaggcc cacaggggat ggaaccttcc agaagtgggc 2280
ggttgtggta gtgccttctg gagaggaaca gagatacaca tgccatgtgc agcacaaggg 2340
gctgcccaag cccctcatcc tgagatgggg taaggagaga gatgggggcg gtcatgtctc 2400
ttagggaaag caggagcccc tctggagacc tttagcaggg tcggggctgg gtcctggagg 2460
tcagaaccct cacattcccc tcctttccca gagccctctc cccagcccac catccccatt 2520
gtgggtatca ttgctggcct ggttctcctt ggagctgtgg tcactggagc tgtggtcact 2580
gctgtgatgt ggaggaagaa gagctcaggt ggggaagggg tgaggagtgg ggtttgagtt 2640
ttcttgtccc actgggggtt tcaagctcca ggtagaaatg tgttctgcct ggttaccggg 2700
aagcaccatc cacattcatg ggcctaccca gcctggaccc tgtgtgccag cacttactct 2760
tttgtaagca cctgtgacaa tgaaggacag atttctcacc ttgatgattg tagtgatggg 2820
gatctgaccc cagtaatcac aggtcagggg aaggtccctg ctgaggacag accttaggag 2880
ggcagttggt ccaggaccca catctgcttt ccttgttttt cctgatcctg cccttggttt 2940
gcagtcacac atttctggaa acttctcgag ggtccaagac taggagcttc ctctaggacc 3000
tcatggccct gctaccttcc tggcctctca caggacgttt tcttcccgca gatagaaaag 3060
gagggagcta ctctcaggct gcaagtaagt atgaaggagg ctgatccctg agatccttgg 3120
gatattgtgg ttgggagccc atgggggagc tcacccaccc cacaattcct cctctagcca 3180
catctcctgt gggatctcac caggttctgt ttttgttcta ccccaggcag ccaaagtgcc 3240
cagggctctg atgtgtctct cacggcttgt aaaggtgaga ccctggggag gctgatgtgt 3300
gtgggttgtt ggggtaacag tggatatagc tgtgctatgg ggtttctttg acttggatgt 3360
attcagcaca tgatgggctg ttgaaggtgt gacccctcac tgtgagtgat atgaatttgt 3420
tcatgaatat tttttctata gtgtgagaca gctgccttgt gtgggactga gaggcaagat 3480
ttgttcatgc cttccctttg tgacttcaag aaccctgact tctctttctg caaaggcatc 3540
tgaatgtgtc tgtgtcccta taggcataat gtgaggtggt ggggagacca gcccacaccc 3600
gtgtccacca tgaccctgtt ccccacactg acctacattc cttccccgat cacctttcct 3660
gttccagaga agtggtgctg ggatgtctcc atctctgtct caacttcatg gtgcactgag 3720
c 3721
//