Dbfetch
ID MT268092; SV 1; linear; genomic DNA; STD; HUM; 3258 BP. XX AC MT268092; XX DT 09-OCT-2020 (Rel. 144, Created) DT 11-MAR-2021 (Rel. 144, Last updated, Version 3) XX DE Homo sapiens MHC class II antigen (HLA-DPA1) gene, HLA-DPA1*01:35N allele, DE partial sequence. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3258 RA Shike H., Fisher C., Kumer L., Casey H., Tyler J.; RT ; RL Submitted (30-MAR-2020) to the INSDC. RL Pathology, PennState Hershey Medical Center, 500 University Drive, Hershey, RL PA 17033, USA XX DR MD5; 3fe69e308fd8ec57824cfc12fd919ea0. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 03/20/2020 CC Sequencing Technology :: IonTorrent CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3258 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /country="USA: Central Pennsylvania" FT /collection_date="16-Mar-2020" FT /sex="male" FT /cell_type="peripheral whole blood cells" FT /db_xref="taxon:9606" FT gene <1..>3258 FT /gene="HLA-DPA1" FT /allele="HLA-DPA1*01:35N" FT /note="MHC class II antigen; null allele" XX SQ Sequence 3258 BP; 872 A; 764 C; 637 G; 985 T; 0 other; ccccaggaag ccttccctga tgtgctgttt ggtcgcatct tgtgtatacc tacgtatctg 60 cacttatcct tctgaacctg ctgttgtcct gtcacttgtg tttccttctg tgacttatac 120 gcgtctgcag aacaggacgt atgtattatt tttatttggg tatttagcat ctaacagtgt 180 ttgacatata gtagtctttt aatacatatt tttgtctgaa tggaaatgat attttgaaga 240 aaaataatct gttccatagc tggctgatct ttggactgca gaacttgtga aagtgttttt 300 taaaaagcat tttaaaaagt acaagggaca ttcatgtatt aagaagatga gtttccaata 360 actgctagag gactttgtgt ctttttattt taccctcttt ttcctgatga gtcctttgag 420 tcctttaaac tgaggagcaa gctaagtttc ctagtgaaat acctatagga tttgttttgt 480 ttagtttcaa ataccactct ttgcttggcc acttactgtg tcagggagtc attctcagtg 540 aaaaataaga cacaggtcat accctctaga cacttacaat tacagtggca aggagtcatt 600 ctcctgtcac tgtaagtggc caagcacaga ctgggtcccc acatgtcagg gctgaaaact 660 cacagggaaa tctgtgagtt gggaggtgag agcagaagag tcccgtagtt ccttctcact 720 ctgatgcatt tatcattcta aacccagact ttcacataca cattcatcgt tttctttcat 780 gataatagtt gcttttatcc tcttatcttt gctaattctt acaaactaat aaagactaag 840 aaacaaaata aattaaatcc tacaggtgtt ccaaactcag caataatttc tagttggcct 900 ctaaaacaaa aatcaaaata taaatgtaag aaaagtttag aatgcttagt acctgtgtga 960 tgaaataatc tgtacactaa acccccaagt catgagttta cctatacaac aaacctgcac 1020 atgtactcct gaacataaaa taaatgttga aatattttta aaaaggaaac aaaagtttgg 1080 aacaaatgcc aaaataactg tactgtactt ttgaatttat atgccccaaa tgaaaaatat 1140 tatcaacaaa gctatacatt ctacagtttc atgttcataa actaagacag aaactttaaa 1200 actgtcaaga gccctaaaat ttgaaggata ttttcttctt cctctcaatt ttgtattttt 1260 ttctaccttt tctataataa gaaaaagaaa atgtccattc ccccaccccc atgactctaa 1320 aaacaatttt acatctgtgt catagaaaaa ttaagatctt aatgggagag aaaacctctc 1380 tactagttcc gccagtagcc gtatgacctt agcaagttat taatatgtaa cttccctgca 1440 tttccttacc tgtaaaatgt atgatatgta tttgcttcat agggttattg tgacaattca 1500 gcgagtgaaa tatgtaaagt atttagaagg atgcctggca caagtaagtg ctcaacaaat 1560 gttagctgtc attgttacta ttactattgt gtagggtcag gatgcccaga ctttcaaaga 1620 ccaggaagca gcttgactta tcagtgataa acttttcatt ttgttctttg ctcctttctt 1680 tttataactg ctcatctgct ctgtattatt tcctttatgg tgttgctcct tcttcttccc 1740 catatgtcct tcctttgacc tcttaccttc ttccttttta tattcataag tctttattca 1800 ttctctagct ttgaccactt gcatattcaa actgacattt tgtcgtgttt ttctctactg 1860 tctttatgca gcggaccatg tgtcaactta tgccgcgttt gtacagacgc atagaccaac 1920 aggggagttt atgtttgaat ttgatgaaga tgagatgttc tatgtggatc tggacaagaa 1980 ggagaccgtc tggcatctgg aggagtttgg ccaagccttt tcctttgagg ctcagggcgg 2040 gctggctaac attgctatat tgaacaacaa cttgaatacc ttgatctagc gttccaacca 2100 cactcaggcc accaacggta cgccctatct ttgcctcttc ctctgtagcc caactggaag 2160 ggatgagagg gcctctctgc caccctcaga ctaggaagcc taagtgcccc ctgctgtgtg 2220 atcctcttcc cctagtggcc atgggctgat cccactacag caagggcttg catcctctct 2280 tctcaggaga gagaaaggtg agcagagtga ggctggtcag tggtgtgata cccctctctg 2340 tgattcagag ctgccataaa atctaaggct gaggtagagg accaccctcc cctaagaggt 2400 ggagcctttg tgattcatcc cagaagaggg gcctaacctg gtgctgtctc cttccagatc 2460 cccctgaggt gaccgtgttt cccaaggagc ctgtggagct gggccagccc aacaccctca 2520 tctgccacat tgacaagttc ttcccaccag tgctcaacgt cacgtggctg tgcaacgggg 2580 agctggtcac tgagggtgtc gctgagagcc tcttcctgcc cagaacagat tacagcttcc 2640 acaagttcca ttacctgacc tttgtgccct cagcagagga cttctatgac tgcagggtgg 2700 agcactgggg cttggaccag ccgctcctca agcactgggg tatgcaactg cttttctctc 2760 cataatctcc tggcatcctc tattccaaag acctggtgtc ctctgcacca gctttccgca 2820 ctggctgggt ctcagtcctc tcctcgtcct aacatccaat taactggtcc ataaccttca 2880 attcccacaa ccatcccagg ccatcaccac cctcactgca cctcctgacc ctatctcttc 2940 attcttcccc cagaggccca agagccaatc cagatgcctg agacaacgga gactgtgctc 3000 tgtgccctgg gcctggtgct gggcctagtc ggcatcatcg tgggcaccgt cctcatcata 3060 aagtctctgc gttctggcca tgacccccgg gcccagggga ccctgtgaaa tactgtaaag 3120 gtgggaatgt aaagaggagg ccctaggatt tgtagaatgt aaggaaggga ggaaaaattc 3180 aatctgataa gtgttcattg atcttctaat gggttaaaag cattcagcca cataacaaca 3240 acaacaccga taactaac 3258 //