Dbfetch

Dbfetch

ID   MT161580; SV 1; linear; genomic DNA; STD; HUM; 883 BP.
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AC   MT161580;
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DT   09-OCT-2020 (Rel. 144, Created)
DT   11-MAR-2021 (Rel. 144, Last updated, Version 3)
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DE   Homo sapiens isolate 20200309DPA1e2 MHC class II antigen (HLA-DPA1) gene,
DE   HLA-DPA1*01:04 allele, partial cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-883
RA   Fuerst D., Tsamadou C., Neuchel C., Mytilineos J.;
RT   "Complete sequence of HLA-DPA1*01:04";
RL   Unpublished.
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RN   [2]
RP   1-883
RA   Fuerst D., Tsamadou C., Neuchel C., Mytilineos J.;
RT   ;
RL   Submitted (09-MAR-2020) to the INSDC.
RL   Transplant Immunology, Institute for Clinical Transfusion Medicine Ulm,
RL   Helmholtzstr.10, Ulm, BW 89077, Germany
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DR   MD5; f6f1bde6310a630c8ed73ff59abb43c2.
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..883
FT                   /organism="Homo sapiens"
FT                   /isolate="20200309DPA1e2"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>883
FT                   /gene="HLA-DPA1"
FT                   /allele="HLA-DPA1*01:04"
FT   mRNA            join(<1..246,347..628,729..>883)
FT                   /gene="HLA-DPA1"
FT                   /allele="HLA-DPA1*01:04"
FT                   /product="MHC class II antigen"
FT   CDS             join(<1..246,347..628,729..883)
FT                   /codon_start=3
FT                   /gene="HLA-DPA1"
FT                   /allele="HLA-DPA1*01:04"
FT                   /product="MHC class II antigen"
FT                   /protein_id="QOC77841.1"
FT                   /translation="DHVSTYAAFVQTHRPTGEFMFEFDDDEMFYVDLDKKETVWHLEEF
FT                   GQAFSFEAQGGLANIAILNNNLNTLIQRSNHTQATNDPPEVTVFPKEPVELGQPNTLIC
FT                   HIDKFFPPVLNVTWLCNGELVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVE
FT                   HWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVGTVLIIKSLRSGHDPRA
FT                   QGTL"
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SQ   Sequence 883 BP; 147 A; 195 C; 187 G; 154 T; 200 other;
     cggaccatgt gtcaacttat gccgcgtttg tacagacgca tagaccaaca ggggagttta        60
     tgtttgaatt tgatgacgat gagatgttct atgtggatct ggacaagaag gagaccgtct       120
     ggcatctgga ggagtttggc caagcctttt cctttgaggc tcagggcggg ctggctaaca       180
     ttgctatatt gaacaacaac ttgaatacct tgatccagcg ttccaaccac actcaggcca       240
     ccaacgnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnatcc ccctgaggtg       360
     accgtgtttc ccaaggagcc tgtggagctg ggccagccca acaccctcat ctgccacatt       420
     gacaagttct tcccaccagt gctcaacgtc acgtggctgt gcaacgggga gctggtcact       480
     gagggtgtcg ctgagagcct cttcctgccc agaacagatt acagcttcca caagttccat       540
     tacctgacct ttgtgccctc agcagaggac ttctatgact gcagggtgga gcactggggc       600
     ttggaccagc cgctcctcaa gcactgggnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       660
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       720
     nnnnnnnnag gcccaagagc caatccagat gcctgagaca acggagactg tgctctgtgc       780
     cctgggcctg gtgctgggcc tagtcggcat catcgtgggc accgtcctca tcataaagtc       840
     tctgcgttct ggccatgacc cccgggccca ggggaccctg tga                         883
//