Dbfetch
ID MN889862; SV 1; linear; genomic DNA; STD; HUM; 3191 BP.
XX
AC MN889862;
XX
DT 06-FEB-2020 (Rel. 143, Created)
DT 06-FEB-2020 (Rel. 143, Last updated, Version 1)
XX
DE Homo sapiens isolate DNA_29_Val_C MHC class I antigen (HLA-C) gene,
DE HLA-C*04:01:01:01 allele, complete cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-3191
RA Alizadeh M.;
RT ;
RL Submitted (30-DEC-2019) to the INSDC.
RL PFBI, EFS, Rue Pierre Jean Gineste, Rennes, Bretagne 35016, France
XX
DR MD5; 6bea658d68001ec38a578b65a5fda187.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: Profiler v. 2.0.236
CC Sequencing Technology :: Illumina
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..3191
FT /organism="Homo sapiens"
FT /isolate="DNA_29_Val_C"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <233..>3127
FT /gene="HLA-C"
FT /allele="HLA-C*04:01:01:01"
FT mRNA join(<233..305,436..705,952..1227,1815..2090,2212..2331,
FT 2771..2803,2911..2958,3123..>3127)
FT /gene="HLA-C"
FT /allele="HLA-C*04:01:01:01"
FT /product="MHC class I antigen"
FT CDS join(233..305,436..705,952..1227,1815..2090,2212..2331,
FT 2771..2803,2911..2958,3123..3127)
FT /codon_start=1
FT /gene="HLA-C"
FT /allele="HLA-C*04:01:01:01"
FT /product="MHC class I antigen"
FT /protein_id="QHR76757.1"
FT /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFSTSVSWPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASPRGEPREPWVEQEGPEYWDRETQKYKRQAQADRVNLRK
FT LRGYYNQSEDGSHTLQRMFGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTA
FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE
FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPEPLTLRWKPSSQPTIPIVGIVAGLAVLAVLAVLGAMVAVVMCRRKSSGG
FT KGGSCSQAASSNSAQGSDESLIACKA"
XX
SQ Sequence 3191 BP; 600 A; 926 C; 998 G; 667 T; 0 other;
caagggccgt gtctgcactg gggaggcgcc gcgttgggga ttctccactc ccctgagttt 60
cacttcttct cccaacctgc gtcgggtcct tcttcctgaa tactcatgac gcgtccccaa 120
ttcccactcc cattgggtgt cgggttctag agaagccaat cagcgtctcc gcagtcccgg 180
ttctaaagtc cccagtcacc cacccggact cagattctcc ccagacgccg agatgcgggt 240
catggcgccc cgaaccctca tcctgctgct ctcgggagcc ctggccctga ccgagacctg 300
ggccggtgag tgcggggttg ggagggaaac ggcctctggg gagaggagcg aggggcccgc 360
ccggcgaggg cgcaggaccc ggggagccgc gcagggagga gggtcgggcg ggtctcagcc 420
actcctcgtc cccaggctcc cactccatga ggtatttctc cacatccgtg tcctggcccg 480
gccgcgggga gccccgcttc atcgcagtgg gctacgtgga cgacacgcag ttcgtgcggt 540
tcgacagcga cgccgcgagt ccaagagggg agccgcggga gccgtgggtg gagcaggagg 600
ggccggagta ttgggaccgg gagacacaga agtacaagcg ccaggcacag gctgaccgag 660
tgaacctgcg gaaactgcgc ggctactaca accagagcga ggacggtgag tgaccccggc 720
ccggggcgca ggtcacgacc cctccccatc ccccacggac ggcccgggtc gccccgagtc 780
tccccgtctg agatccaccc cgaggctgcg gaacccgccc agaccctcga ccggagagag 840
ccccagtcac ctttacccgg tttcattttc agtttaggcc aaaatccccg cgggttggtc 900
gggactgggg cggggctcgg gggaccgggc tgaccacggg ggcggggcca gggtctcaca 960
ccctccagag gatgtttggc tgcgacctgg ggccggacgg gcgcctcctc cgcgggtata 1020
accagttcgc ctacgacggc aaggattaca tcgccctgaa cgaggatctg cgctcctgga 1080
ccgccgcgga cacggcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgaggcgg 1140
agcagcggag agcctacctg gagggcacgt gcgtggagtg gctccgcaga tacctggaga 1200
acgggaagga gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc 1260
ccgtagatct cccgggatgg cctcccacga ggaggggagg aaaatgggat cagcgctaga 1320
atatcgccct cccttgaatg gagaatggga tgagttttcc tgagtttcct ctgagggccc 1380
cctctgctct ctaggacaat taagggatga agtccttgag gaaatggagg ggaagacagt 1440
ccctggaata ctgatcaggg gtcccctttg accactttga ccactgcagc agctgtggtc 1500
aggctgctga cctttctctc aggccttgtt ctctgcctga cgctcaatgt gtttgaaggt 1560
ttgattccag cttttctgag tccttcggcc tccactcagg tcaggaccag aagtcgctgt 1620
tcctccctca gagactagaa ctttccaatg aataggagat tatcccaggt gcctgtgtcc 1680
aggctggcgt ctgggttctg tgcccccttc cccaccccag gtgtcctgtc cattctcagg 1740
atggtcacat gggcgctgtt ggagtgtcgc aagagagata caaagtgtct gaattttctg 1800
actcttccca tcagaacacc caaagacaca cgtgacccac catcccgtct ctgaccatga 1860
ggccaccctg aggtgctggg ccctgggctt ctaccctgcg gagatcacac tgacctggca 1920
gtgggatggg gaggaccaaa ctcaggacac cgagcttgtg gagaccaggc cagcaggaga 1980
tggaaccttc cagaagtggg cagctgtggt ggtgccttct ggagaagagc agagatacac 2040
gtgccatgtt cagcacgagg ggctgccgga gcccctcacc ctgagatgga gtaagaaggg 2100
ggatgagggg tgatgtgtct tctcagggaa agcagaagtc ctggagccct tcagccgggt 2160
cagggctgag gcttggaggt cagggcccct caccttcccc tcctttccca gagccgtctt 2220
cccagcccac catccccatc gtgggcatcg ttgctggcct ggctgtcctg gctgtcctag 2280
ctgtcctagg agctatggtg gctgttgtga tgtgtaggag gaagagctca ggtagggaag 2340
gggtgaggag tggggtctgg gttttcttgt tccactggga gtttcaagcc ccaggtagaa 2400
gtgtgcccca cctcgttact ggaagcacca tccacacatg ggccatccca gcctgggacc 2460
ctgtgtgcca gcacttactc tgttgtgaag cacatgacaa tgaaggacag atgtatcacc 2520
ttgatgatta tggtgttggg gtccttgatt ccagcattca tgagtcaggg gaaggtccct 2580
gctaaggaca gaccttagga gggcagttgc ttcagaaccc acagctgctt tccccgtgtt 2640
tcctgatcct gccctgggtc tgcagtcata gttctggaaa cttctcttgg gtccaagact 2700
aggaggttcc cctaagatcg catggccctg cctcctccct gtcccctcac agggcatttt 2760
cttcccacag gtggaaaagg agggagctgc tctcaggctg cgtgtaagtg atggcggtgg 2820
gcgtgtggag gagctcaccc accccataat tcctcttgtc ccacatctcc tgcgggctct 2880
gaccaggtct ttttttttgt tctaccccag ccagcaacag tgcccagggc tctgatgagt 2940
ctctcatcgc ttgtaaaggt gagattctgg ggagctgaag tggtcggggg tggggcagag 3000
ggaaaaggcc taggtaatgg ggatcctttg attgggacgt ttcgaatgtg tggtgagctg 3060
ttcagagtgt catcacttac catgactgac ctgaatttgt tcatgactat tgtgttctgt 3120
agcctgagac agctgcctgt gtgggactga gatgcaggat ttcttcacac ctctcctttg 3180
tgacttcaag a 3191
//