Dbfetch
ID MN871646; SV 1; linear; genomic DNA; STD; HUM; 2964 BP.
XX
AC MN871646;
XX
DT 03-JUL-2021 (Rel. 144, Created)
DT 03-JUL-2021 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens isolate 19135078 MHC class I antigen (HLA-C) gene,
DE HLA-C*07:02:01:xx allele, partial cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-2964
RA Aggarwal A.;
RT "Novel HLA Alleles in Indian Population";
RL Unpublished.
XX
RN [2]
RP 1-2964
RA Aggarwal A.;
RT ;
RL Submitted (23-DEC-2019) to the INSDC.
RL Molecular, Core Diagnostics, 7th Floor Fortune Tower 406 Udyog Vihar Phase
RL III Sector 20, Gurgaon, Haryana 122008, India
XX
DR MD5; 3d7b07aa55f716a649d596dac5ceed9f.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: NGSengine v. 2.15
CC Sequencing Technology :: IonTorrent
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..2964
FT /organism="Homo sapiens"
FT /isolate="19135078"
FT /mol_type="genomic DNA"
FT /country="India"
FT /sex="male"
FT /db_xref="taxon:9606"
FT gene <292..>2870
FT /gene="HLA-C"
FT /allele="HLA-C*07:02:01:xx"
FT mRNA join(<292..364,495..764,1015..1290,1878..2153,2278..2397,
FT 2838..>2870)
FT /gene="HLA-C"
FT /allele="HLA-C*07:02:01:xx"
FT /product="MHC class I antigen"
FT CDS join(292..364,495..764,1015..1290,1878..2153,2278..2397,
FT 2838..>2870)
FT /codon_start=1
FT /gene="HLA-C"
FT /allele="HLA-C*07:02:01:xx"
FT /product="MHC class I antigen"
FT /protein_id="QOC77825.1"
FT /translation="MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPR
FT FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVSLRN
FT LRGYYNQSEDGSHTLQRMSGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA
FT AQITQRKLEAARAAEQLRAYLEGTCVEWLRRYLENGKETLQRAEPPKTHVTHHPLSDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY
FT TCHMQHEGLQEPLTLSWEPSSQPTIPIMGIVAGLAVLVVLAVLGAVVTAMMCRRKSSGG
FT KGGSCSQAA"
XX
SQ Sequence 2964 BP; 547 A; 902 C; 927 G; 588 T; 0 other;
aggagaagag ggatcaggac gaagtcccag gtcccgggcg gggctctcag ggtctcaggc 60
tccaagggcc gtgtctgcat tggggaggcg ccgcgttggg gattctccac tcccctgagt 120
ttcacttctc ccaacctgcg tcgggtcctt cttcctgaat actcatgacg cgtccccaat 180
tcccactccc attgggtgtc gggttctaca gaagccaatc agcgtctccg cagtcccggt 240
tctaaagtcc ccagtcaccc acccggactc acattctccc cagaggccga gatgcgggtc 300
atggcgcccc gagccctcct cctgctgctc tcgggaggcc tggccctgac cgagacctgg 360
gcctgtgagt gcggggttgg gagggaagcg gcctctgcgg agaggagcga ggggccctcc 420
cggcgagggc gcaggacccg gggagccgcg cagggaggtg ggtcgggcgg gtctcagccc 480
ctcctcgccc ccaggctccc actccatgag gtatttcgac accgccgtgt cccggcccgg 540
ccgcggagag ccccgcttca tctcagtggg ctacgtggac gacacgcagt tcgtgcggtt 600
cgacagcgac gccgcgagtc cgagagggga gccgcgggcg ccgtgggtgg agcaggaggg 660
gccggagtat tgggaccggg agacacagaa gtacaagcgc caggcacagg ctgaccgagt 720
gagcctgcgg aacctgcgcg gctactacaa ccagagcgag gacggtgagt gaccccggcc 780
cggggcgcag gtcacgaccc ctccccatcc cccacggacg gcccgggtcg cccagagtct 840
ccccgtctga gatccacccc aaggtggatc tgcggaaccc gcccagaccc tcgaccggag 900
agagccccag tcgcctttac ccggtttcat tttcggttta ggccaaaatc cccgcgggtt 960
ggtcggggcg gggcggggct cgggggactg ggctgaccgc gggggcgggg ccagggtctc 1020
acaccctcca gaggatgtct ggctgcgacc tggggcccga cgggcgcctc ctccgcgggt 1080
atgaccagtc cgcctacgac ggcaaggatt acatcgccct gaacgaggac ctgcgctcct 1140
ggaccgccgc ggacaccgcg gctcagatca cccagcgcaa gttggaggcg gcccgtgcgg 1200
cggagcagct gagagcctac ctggagggca cgtgcgtgga gtggctccgc agatacctgg 1260
agaacgggaa ggagacgctg cagcgcgcag gtaccagggg cagtggggag ccttccccat 1320
ctcctataga tctcccggga tggcctccca cgaggagggg aggaaaatgg gatcagcact 1380
ggaatatcgc cctcccttga atggagaatg gcatgagttt tcctgagttt cctctgaggg 1440
ccccctctgc tctctaggac aattaaggga tgaagtctct gaggaaatgg aggggaagac 1500
agtccctgga atactgatca ggggtctcct ttgaccactt tgaccactgc agcagctgtg 1560
gtcaggctgc tgacctttct ctcaggcctt gttctctgcc tcacactcaa tgtgtctgaa 1620
ggtttgattc cagcttttct gagtcctgca gcctccactc aggtcaggac cagaagtcgc 1680
tgttcctccc tcagagacta gaactttcca atgaatagga gattatccca ggtgcctgtg 1740
tccaggctgg cgtctgggtt ctgtgccgcc ttccccaccc caggtgtcct gtccattctc 1800
aggatggtca catgggcgct gctggagtgt cccaagagag atgcaaagtg tctgaatttt 1860
ctgactcttc ccgtcagaac ccccaaagac acacgtgacc caccaccccc tctctgacca 1920
tgaggccacc ctgaggtgct gggccctggg cttctaccct gcggagatca cactgacctg 1980
gcagcgggat ggggaggacc agacccagga caccgagctt gtggagacca ggccagcagg 2040
agatggaacc ttccagaagt gggcagctgt ggtggtgcct tctggacaag agcagagata 2100
cacgtgccat atgcagcacg aggggctgca agagcccctc accctgagct ggggtaagga 2160
ggggaatggg gggtcacatc tcttatcaga gaaagcagaa gtccttctgg agcccttcag 2220
ccgggtcagg gctgaggctt gggggtcagg gcccctcacc ttctcctcct ttcccagagc 2280
catcttccca gcccaccatc cccatcatgg gcatcgttgc tggcctggct gtcctggttg 2340
tcctagctgt ccttggagct gtggtcaccg ctatgatgtg taggaggaag agctcaggta 2400
gggaaggggt gaagagcggg gtctgggttt tcttgtccca ctgggagttt caagccccag 2460
gtagaagtgt gccccgcctt gttactggaa gcaccatcca cacatgggcc atcccagcct 2520
gggaccctgt gtgccagcac ttactctttt gtgaagcaca tgtgacaatg aaggacggat 2580
gtatcacctt gatgattatg gtgttggggt cctgattcca gcattcatga gtcaggggaa 2640
ggtccctgct aaggacagac cttaggaggg cagttggtcc agaacccaca actgctttcc 2700
ccatgtttcc tgatcctgcc ctgggtctgc agtcgtagtt ctggaaactt ctcttgggtc 2760
caagactagg aggttcccct aagatcacat ggccctgcct cctcccagtc ccctcatagg 2820
gcattttctt cccacaggtg gaaaaggagg gagctgctct caggctgcgt gtaagtgatg 2880
gcggcgggcg tgtggaggag ctcacctact ccataattcc tcttgtccca catctcctgc 2940
gggctctgac caggtctttt tttt 2964
//