Dbfetch
ID MN839532; SV 1; linear; genomic DNA; STD; HUM; 1536 BP. XX AC MN839532; XX DT 30-JUN-2020 (Rel. 144, Created) DT 30-JUN-2020 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens MHC class II antigen (HLA-DQA1) gene, HLA-DQA1*01:02var DE allele, exons 2 and 3 and partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1536 RA Kleiser M., Roubaty D.; RT ; RL Submitted (17-DEC-2019) to the INSDC. RL HLA-Diagnostik und Immunogenetik, University Hospital Basel, Petersgraben RL 4, Basel, Basel-Stadt 4031, Switzerland XX DR MD5; 0198a9835f0ad7e06c439503f05c70eb. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 2.15.0.15000 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1536 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>1536 FT /gene="HLA-DQA1" FT /allele="HLA-DQA1*01:02var" FT mRNA join(<490..738,1152..>1433) FT /gene="HLA-DQA1" FT /allele="HLA-DQA1*01:02var" FT /product="MHC class II antigen" FT CDS join(<490..738,1152..>1433) FT /codon_start=3 FT /gene="HLA-DQA1" FT /allele="HLA-DQA1*01:02var" FT /product="MHC class II antigen" FT /protein_id="QKY59830.1" FT /translation="DHVASCGVNLYQFYGPSGQYTHEFDGDEQFYVDLERKETAWRWPE FT FSKFGGFDPQGALRNMAVAKHNLNIMTKRYNSTAATNEVPEVTVFSKSPVTLGQPNTLI FT CLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIYDCKV FT EHWGLDQPLLKHW" FT exon 490..738 FT /gene="HLA-DQA1" FT /allele="HLA-DQA1*01:02var" FT /number=2 FT exon 1152..1433 FT /gene="HLA-DQA1" FT /allele="HLA-DQA1*01:02var" FT /number=3 XX SQ Sequence 1536 BP; 421 A; 362 C; 316 G; 437 T; 0 other; aaaaaagaaa gatctctgtg tagagtgtcc tattctgagc cagtcctgag aggaaaggaa 60 gtataatcaa tttgttatta accaatgaaa gaattaagtg aaagataaat ctcaggaagc 120 agagggaagt aaacctaatt tctgactaag aaagctaaat actacgataa ctcattcatt 180 ccttcttttg ttcaattaca ttatttaatc ataagtccat gacatgccag gcactcagga 240 aatagtaaaa attggacatg cgatattctg cccttgtgta gcgcacacta gagtgggaaa 300 gaaagtgcac ttttaactgg acaactacca acatgaagag gggaggaagc aggggctgga 360 aatgtccaca gactgtgcca aaaaatgaag cccataatat ttgaaagtca gtttcttcca 420 tcattttgtg tattaaggtt ctttcttccc ctgttctccg ccttcctgct tgtcatcttc 480 actcatcagc tgaccacgtt gcctcttgtg gtgtaaactt gtaccagttt tacggtccct 540 ctggccagta cacccatgaa tttgatggag atgagcagtt ctacgtggac ctggagagga 600 aggagactgc ctggcggtgg cctgagttca gcaaatttgg aggttttgac ccgcagggtg 660 cactgagaaa catggctgtg gcaaaacaca acttgaacat catgactaaa cgctacaact 720 ctaccgctgc taccaatggt atgcgtccac cattctgcct ctctttactt aagttatccc 780 tccataccag ggttcattat tttcttccca agaggtcccc agatcttctt atggcaattg 840 ctgaaatttt atcatctccc atctctaaaa tcacatattc ccatgtaata caagggtctt 900 tccattatgc attcagcaaa tccttctagg agaggtctca tcaacctcct actttattaa 960 acatgcccac agagagaagg gcacaggaat aaagcagagg caatgtgtcg ttgctcccaa 1020 gcagaaggta aataagacct ctttgactat caggtggtga aatgctggta ggagggctct 1080 tccaggatgt aatgcagaac ttcagggcag agctattcac acttcacacc agtgctgttt 1140 cctcaccaca gaggttcctg aggtcacagt gttttccaag tctcccgtga cactgggtca 1200 gcccaacacc ctcatctgtc ttgtggacaa catctttcct cctgtggtca acatcacatg 1260 gctgagcaat gggcagtcag tcacagaagg tgtttctgag accagcttcc tctccaagag 1320 tgatcattcc ttcttcaaga tcagttacct caccttcctc ccttctgctg atgagattta 1380 tgactgcaag gtggagcact ggggcctgga ccagcctctt ctgaaacact ggggtaagga 1440 tgagtttcat cattttttga ttctttcttg tctgtcaagt tcagaacttc ctgcctttta 1500 ctcctatatc caaaaacttg ttttccacac ttcatg 1536 //