Dbfetch
ID MN816881; SV 1; linear; genomic DNA; STD; HUM; 3853 BP. XX AC MN816881; XX DT 03-FEB-2020 (Rel. 143, Created) DT 03-FEB-2020 (Rel. 143, Last updated, Version 1) XX DE Homo sapiens isolate BY02087 MHC class I antigen (HLA-B) gene, HLA-B*42:08 DE allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3853 RA Hurley C.K.; RT ; RL Submitted (10-DEC-2019) to the INSDC. RL CW Bill Young Marrow Donor Recruitment and Research Program, Georgetown RL University, 11333 Woodglen Drive, Department of Oncology Georgetown RL University Medical Center CW Bill Young Marrow Donor Recruitment and RL Research Program Room 337, Rockville, MD 20852, USA XX DR MD5; c28d8d3a26c4315ad8f2a270f43632a8. XX CC ##Assembly-Data-START## CC Assembly Method :: Assign TruSight v. HLA2.1.0.934; CC Sequencher v. V5.4.6; GenDx v. V1.9.3.4077 CC Sequencing Technology :: Illumina; Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3853 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="BY02087" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>3853 FT /gene="HLA-B" FT /allele="HLA-B*42:08" FT mRNA join(<285..357,486..755,1002..1277,1850..2125,2219..2335, FT 2777..2809,2916..>2959) FT /gene="HLA-B" FT /allele="HLA-B*42:08" FT /product="MHC class I antigen" FT CDS join(285..357,486..755,1002..1277,1850..2125,2219..2335, FT 2777..2809,2916..2959) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*42:08" FT /product="MHC class I antigen" FT /protein_id="QHQ71424.1" FT /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRN FT LRGYYNQSEAGSHTLQSMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAARVAEQDRAYLEGTCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" XX SQ Sequence 3853 BP; 721 A; 1093 C; 1185 G; 854 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccctgagtt tcacttcttc 120 tcccaacttg tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca cttcccactc 180 ccattgggta ttggatatct agagaagcca atcagcgtcg ccgcggtccc agttctaaag 240 tccccacgca cccacccgga ctcagagtct cctcagacgc cgagatgctg gtcatggcgc 300 cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc gggagggaaa tggcctctgc cgggaggagc gaggggaccg caggcggggg 420 cgcaggacct gaggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcacc 480 cccaggctcc cactccatga ggtatttcta cacctccgtg tcccggcccg gccgcgggga 540 gccccgcttc atctcagtgg gctacgtgga cgacacccag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggagta 660 ttgggaccgg aacacacaga tctacaaggc ccaggcacag actgaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacggacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggctcggg gggacggggc tgaccgcggg gccggggcca gggtctcaca ccctccagag 1020 catgtacggc tgcgacgtgg ggccggacgg gcgcctcctc cgcgggcata accagtacgc 1080 ctacgacggc aaggattaca tcgccctgaa cgaggacctg cgctcctgga ccgcggcgga 1140 caccgcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcaggacag 1200 agcctacctg gagggcacgt gcgtggagtg gctccgcaga tacctggaga acgggaagga 1260 gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320 ccggggatgg cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct 1380 cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct 1440 ctagacaatt aagggatgac gtctctgagg aaatggaggg gaagacagtc cctagaatac 1500 tgatcagggg tcccctttga cccctgcagc agccttggga accgtgactt ttcctctcag 1560 gccttgttct ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc 1620 actttacctc cactcagatc aggagcagaa gtccctgttc cccgctcaga gactcgaact 1680 ttccaatgaa taggagatta tcccaggtgc ctgcatccgc tggtgtctgg gttctgtgcc 1740 ccttccccac cccaggtgtc ctgtccattc tcaggctggt cacatgggtg gtcctagggt 1800 gtgccatgag agatgcaaag cgcctgaatt ttctgactct tcccatcaga ccccccaaag 1860 acacacgtga cccaccaccc catctctgac catgaggcca ccctgaggtg ctgggccctg 1920 ggcttctacc ctgcggagat cacactgacc tggcagcggg atggcgagga ccaaactcag 1980 gacactgagc ttgtggagac cagaccagca ggagatagaa ccttccagaa gtgggcagct 2040 gtggtggtgc cttctggaga agagcagaga tacacatgcc atgtacagca tgaggggctg 2100 ccgaagcccc tcaccctgag atggggtaag gagggggatg aggggtcata tctcttctca 2160 gggaaagcag gagcccttca gcagggtcag ggcccctcat cttcccctcc tttcccagag 2220 ccgtcttccc agtccaccgt ccccatcgtg ggcattgttg ctggcctggc tgtcctagca 2280 gttgtggtca tcggagctgt ggtcgctgct gtgatgtgta ggaggaagag ctcaggtagg 2340 gaaggggtga ggggtggggt ctgggttttc ttgtcccact gggggtttca agccccaggt 2400 agaagtgttc cctgcctcat tactgggatg cagcatccac acaggggcta acgcagcctg 2460 ggaccctgtg tgccagcact tactcttttg tgcagcacat gtgacaatga aggacggatg 2520 tatcaccttg gtggttgtgg tgttggggtc ctgattccag cattcatgag tcaggggaag 2580 gtccctgcta aggacagacc ttaggagggc agttggtcca ggacccacac ttgctttcct 2640 cgtgtttcct gatcctgcct tgggtctgta gtcatacttc tggaaattcc ttttgggtcc 2700 aagacgagga ggttcctcta agatctcatg gccctgcttc ctcccagtcc cctcacaggg 2760 cattttcttc ccacaggtgg aaaaggaggg agctactctc aggctgcgtg taagtgatgg 2820 gggtgggagt gtggaggagc tcacccaccc cataattcct cctgtcccac gtctcctgcg 2880 ggctctgacc aggtcctgtt tttgttctac tccaggcagc gacagtgccc agggctctga 2940 tgtgtctctc acagcttgaa aaggtgagat tcttggggtc tagagtgggt ggggtggcgg 3000 gtctgggggt gggtggggca gtggggaaag gcctgggtaa tggagattct ttgattggga 3060 tgtttcgcgt gtgtggtggg ctgtttagag tgtcatcact taccatgact aaccagaatt 3120 tgttcatgac tgttgttttc tgtagcctga gacagctgtc ttgtgaggga ctgagatgca 3180 ggatttcttc acgcctcccc tttgtgactt caagagcctc tggcatctct ttctgcaaag 3240 gcacctgaat gtgtctgcgt ccctgttagc ataatgtgag gaggtggaga gacagcccac 3300 ccttgtgtcc actgtgaccc ctgttcccat gctgacctgt gtttcctccc cagtcatctt 3360 tcttgttcca gagaggtggg gctggatgtc tccatctctg tctcaacttt acgtgcactg 3420 agctgcaact tcttacttcc ctactgaaaa taagaatctg aatataaatt tgttttctca 3480 aatatttgct atgagaggtt gatggattaa ttaaataagt caattcctgg aatttgagag 3540 agcaaataaa gacctgagaa ccttccagaa tctgcatgtt cgctgtgctg agtctgttgc 3600 aggtggggtg tggagaaggc tgtggggggc cgagtgtgga cggggcctgt gcccatttgg 3660 tgttgagtcc atcatgggct ttatgtggtt agtcctcagc tgggtcacct tcactgctcc 3720 attgtccttg tcccttcagt ggaaacttgt ccagtgggag ctgtgaccac agaggctcac 3780 acatcgccct gggcggcccc tgcacacggg ggtctctgtg cattctgaga caaattttca 3840 gagccattca cct 3853 //