Dbfetch
ID MN652654; SV 1; linear; genomic DNA; STD; HUM; 4304 BP. XX AC MN652654; XX DT 14-JAN-2020 (Rel. 143, Created) DT 14-JAN-2020 (Rel. 143, Last updated, Version 1) XX DE Homo sapiens isolate BY01988 MHC class I antigen (HLA-C) gene, HLA-C*01:13 DE allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-4304 RA Lazaro A., Hou L., Enriquez E., Persaud M., Tate M., Hurley C.K.; RT ; RL Submitted (06-NOV-2019) to the INSDC. RL Oncology, Georgetown University, 11333 Woodglen Dr, Rockville, MD 20852, RL USA XX DR MD5; dfcb8983e700cd9c78310bffdce0c2f2. XX CC ##Assembly-Data-START## CC Assembly Method :: Assign Tru Sight v. HLA 2.1; GenDex v. CC V2.15.0.15000; Sequencher v. V5.4.6 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..4304 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="BY01988" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>4304 FT /gene="HLA-C" FT /allele="HLA-C*01:13" FT mRNA join(<496..568,699..968,1215..1490,2078..2353,2475..2594, FT 3034..3066,3174..3221,3386..>3390) FT /gene="HLA-C" FT /allele="HLA-C*01:13" FT /product="MHC class I antigen" FT CDS join(496..568,699..968,1215..1490,2078..2353,2475..2594, FT 3034..3066,3174..3221,3386..3390) FT /codon_start=1 FT /gene="HLA-C" FT /allele="HLA-C*01:13" FT /product="MHC class I antigen" FT /protein_id="QHD25594.1" FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMKYFFTSVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN FT LRGYYNQSEAGSHTLQWMCGCDLGPDGRLLRGYDQYAYDGKDYIALNEDLRSWTAADKA FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVMVPSGEEQRY FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" XX SQ Sequence 4304 BP; 833 A; 1202 C; 1298 G; 971 T; 0 other; ttattttgct ggatgtagtt taatattacc tgaggtaagg taaggcaaag agtgggaggc 60 agggagtcca gttcagggac ggggattcca ggagaagtga aggggaaggg gctgggcgca 120 gcctgggggt ctctccctgg tttccacaga cagatccttg gccaggactc aggcacacag 180 tgtgacaaag atgcttggtg taggagaaga gggatcagga cgaagtccca ggtcccgggc 240 ggggttctca gggtctcagg ctccaagggc cgtgtctgca ctggggaggc gccgcgttga 300 ggattctcca ctcccctgag tttcacttct tctcccaacc tgcgtcgggt ccttcttcct 360 gaatactcat gacgcgtccc caattcccac tcccattggg tgtcgggttc tagagaagcc 420 aatcagcgtc tccgcagtcc cggttctaaa gtccccagtc acccacccgg actcagattc 480 tccccagacg ccgagatgcg ggtcatggcg ccccgaaccc tcatcctgct gctctcggga 540 gccctggccc tgaccgagac ctgggcctgt gagtgcgggg ttgggaggga aacggcctct 600 gcggagagga acgaggtgcc cgcccggcga gggcgcagga cccggggagc cgcgcaggga 660 ggagggtcgg gcgggtctca gcccctcctc gcccccaggc tcccactcca tgaagtattt 720 cttcacatcc gtgtcccggc ctggccgcgg agagccccgc ttcatctcag tgggctacgt 780 ggacgacacg cagttcgtgc ggttcgacag cgacgccgcg agtccgagag gggagccgcg 840 ggcgccgtgg gtggagcagg aggggccgga gtattgggac cgggagacac agaagtacaa 900 gcgccaggca cagactgacc gagtgagcct gcggaacctg cgcggctact acaaccagag 960 cgaggccggt gagtgacccc ggcccggggc gcaggtcacg acccctcctc atcccccacg 1020 gacggcccgg gtcgccccaa gtctcccggt ctgagatcca ccccgaggct gcggaacccg 1080 cccagaccct cgaccggaga gagccccagt cacctttacc cggtttcatt ttcagtttag 1140 gccaaaatcc ccgcgggttg gtcgggactg gggcggggct cgggggacgg ggctgaccac 1200 gggggcgggg ccagggtctc acaccctcca gtggatgtgt ggctgcgacc tggggcccga 1260 cgggcgcctc ctccgcgggt atgaccagta cgcctacgac ggcaaggatt acatcgccct 1320 gaacgaggac ctgcgctcct ggaccgccgc ggacaaggcg gctcagatca cccagcgcaa 1380 gtgggaggcg gcccgtgagg cggagcagcg gagagcctac ctggagggca cgtgcgtgga 1440 gtggctccgc agatacctgg agaacgggaa ggagacgctg cagcgcgcgg gtaccagggg 1500 cagtggggag ccttccccat ctcccgtaga tctcccggca tggcctccca cgaggagggg 1560 aggaaaatgg gatcagcgct agaatatcgc cctcccttga atggagaatg ggatgagttt 1620 tcctgagttt cctctgaggg ccccctctgc tctctaggac aattaaggga tgaagtcctt 1680 gaggaaatgg aggggaagac agtccctgga atactgatca ggggtcccct ttgaccactt 1740 tgaccactgc agcagctgtg gtcaggctgc tgacctttct ctcaggcctt gttctctgcc 1800 tcacgctcaa tgtgtttgaa ggtttgattc cagcttttct gagtccttcg gcctccactc 1860 aggtcaggac cagaagtcgc tgttcctccc tcagagacta gaactttcca atgaatagga 1920 gattatccca ggtgcctgtg tccaggctgg cgtctgggtt ctgtgccccc ttccccaccc 1980 caggtgtcct gtccattctc aggatggtca catgggcgct gttggagtgt cgcaagagag 2040 atacaaagtg tctgaatttt ctgactcttc ccgtcagaac acccaaagac acacgtgacc 2100 caccatcccg tctctgacca tgaggccacc ctgaggtgct gggccctggg cttctaccct 2160 gcggagatca cactgacctg gcagtgggat ggggaggacc aaactcagga caccgagctt 2220 gtggagacca ggccagcagg agatggaacc ttccagaagt gggcagctgt gatggtgcct 2280 tctggagaag agcagagata cacgtgccat gtgcagcacg aggggctgcc ggagcccctc 2340 accctgagat ggggtaagga gggggatgag gggtgatgtg tcttctcagg gaaagcagaa 2400 gtcctggagc ccttcagccg ggtcagggct gaggcttgga ggtcagggcc cctcaccttc 2460 ccctcctttc ccagagccgt cttcccagcc caccatcccc atcgtgggca tcgttgctgg 2520 cctggctgtc ctggctgtcc tagctgtcct aggagctgtg gtggctgttg tgatgtgtag 2580 gaggaagagc tcaggtaggg aaggggtgag gagtggggtc tgggttttct tgttccactg 2640 ggagtttcaa gccccaggta gaagtgtgcc ccacctcgtt actggaagca ccatccacac 2700 atgggccatc ccagcctggg accctgtgtg ccagcactta ctctgttgtg aagcacatga 2760 caatgaagga cagatgtatc accttgatga ttatggtgtt ggggtccttg attccagcat 2820 tcatgagtca ggggaaggtc cctgctaagg acagacctta ggagggcagt tgcttcagaa 2880 cccacagctg ctttccccgt gtttcctgat cctgccctgg gtctgcagtc atagttctgg 2940 aaacttctct tgggtccaag actaggaggt tcccctaaga tcgcatggcc ctgcctcctc 3000 cctgtcccct cacagggcat tttcttccca caggtggaaa aggagggagc tgctctcagg 3060 ctgcgtgtaa gtgatggcgg tgggcgtgtg gaggagctca cccaccccat aattcctctt 3120 gtcccacatc tcctgcgggc tctgaccagg tctttttttt tgttctaccc cagccagcaa 3180 cagtgcccag ggctctgatg agtctctcat cgcttgtaaa ggtgagattc tggggagctg 3240 aagtggtcgg gggtggggca gagggaaaag gcctaggtaa tggggatcct ttgattggga 3300 cgtttcgaat gtgtggtgag ctgttcagag tgtcatcact taccatgact gacctgaatt 3360 tgttcatgac tattgtgttc tgtagcctga gacagctgcc tgtgtgggac tgagatgcag 3420 gatttcttca cacctctcct ttgtgacttc aagagcctct ggcatctctt tctgcaaagg 3480 catctgaatg tgtctgcgtt cctgttagca taatgtgagg aggtggagag acagcccacc 3540 cccgtgtcca ccgtgacccc tgtccccaca ctgacctgtg ttccctcccc gatcatcttt 3600 cctgttccag agaagtgggc tggatgtctc catctctgtc tcaacttcat ggtgcgctga 3660 gctgcaactt cttacttccc taatgaagtt aagaacctga atataaattt gttttctcaa 3720 atatttgcta tgaagggttg atggattaat taaataagtc aattcctgga agttgagaga 3780 gcaaataaag acctgagaac cttccagaat ccgcatgttc gctgtgctga gtctgttgca 3840 ggtgggggtg gggaaggctg tgaggagacg agtgtggacg gggcctgtgc ctagttgctg 3900 ttcagttctt catgggcttt atgtggtcag tcctcagctg ggtcaccttc actgctccat 3960 tgtccttgtc ccttcagtgg aaacttgtcc agcgggagct gtgaccacag aggctcacac 4020 atcgcccagg gcagcccctg cacacgggag tccctgtgct ttctgagaca aattttcaga 4080 cccagtcagc tcctgccctc cttctagggc tcctcttctg ctttggtctc ctgccctctc 4140 tcccttccct gattccagtg atcttcgtgc tgactccaat cccaactcat gaatctaaag 4200 cagagcctaa tttagattta tatttgtttg taaaattggg tccatagtct agaattgttc 4260 cttcctgaag agagaaacct gattgtgtgc tgcagtgtgc gggg 4304 //