Dbfetch
ID MN642000; SV 1; linear; genomic DNA; STD; HUM; 3073 BP.
XX
AC MN642000;
XX
DT 30-MAY-2020 (Rel. 144, Created)
DT 30-MAY-2020 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens MHC class I protein (HLA-A) gene, HLA-A*01:343 allele,
DE complete cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-3073
RA Gomez-Massa E., Herrero-Mata M.J., Rudilla F.;
RT ;
RL Submitted (05-NOV-2019) to the INSDC.
RL Histocompatibility and Immunogenetics Laboratory, Blood and Tissue Bank,
RL Edifici Frederic Duran i Jorda. Passeig del Taulat 106-116, Barcelona
RL 08005, Spain
XX
DR MD5; a369dead47d20228fa3cd328c237de81.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: GenDx (NGS engine) v. IMGT 3.37.0.
CC Sequencing Technology :: Illumina
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..3073
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>3073
FT /gene="HLA-A"
FT /allele="HLA-A*01:343"
FT mRNA join(<1..180,311..580,822..1097,1677..1952,2055..2171,
FT 2614..2646,2789..2836,3006..>3073)
FT /gene="HLA-A"
FT /allele="HLA-A*01:343"
FT /product="MHC class I protein"
FT exon <1..180
FT /gene="HLA-A"
FT /allele="HLA-A*01:343"
FT /number=1
FT 5'UTR <1..107
FT /gene="HLA-A"
FT /allele="HLA-A*01:343"
FT CDS join(108..180,311..580,822..1097,1677..1952,2055..2171,
FT 2614..2646,2789..2836,3006..3010)
FT /codon_start=1
FT /gene="HLA-A"
FT /allele="HLA-A*01:343"
FT /product="MHC class I protein"
FT /protein_id="QJW70398.1"
FT /translation="MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASQKMEPRAPWIEQEGPEYWDQETRNMKAHSQTDRANLGT
FT LRSYYNQSEDGSHTIQIMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMA
FT AQITKRKWEAVHAAEQRRVYLEGRCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRK
FT GGSYTQAASSDSAQGSDVSLTACKV"
FT exon 311..580
FT /gene="HLA-A"
FT /allele="HLA-A*01:343"
FT /number=2
FT exon 822..1097
FT /gene="HLA-A"
FT /allele="HLA-A*01:343"
FT /number=3
FT exon 1677..1952
FT /gene="HLA-A"
FT /allele="HLA-A*01:343"
FT /number=4
FT exon 2055..2171
FT /gene="HLA-A"
FT /allele="HLA-A*01:343"
FT /number=5
FT exon 2614..2646
FT /gene="HLA-A"
FT /allele="HLA-A*01:343"
FT /number=6
FT exon 2789..2836
FT /gene="HLA-A"
FT /allele="HLA-A*01:343"
FT /number=7
FT exon 3006..>3073
FT /gene="HLA-A"
FT /allele="HLA-A*01:343"
FT /number=8
FT 3'UTR 3011..>3073
FT /gene="HLA-A"
FT /allele="HLA-A*01:343"
XX
SQ Sequence 3073 BP; 589 A; 878 C; 959 G; 647 T; 0 other;
tcccattggg tgtcgggttt ccagagaagc caatcagtgt cgtcgcggtc gctgttctaa 60
agtccgcacg cacccaccgg gactcagatt ctccccagac gccgaggatg gccgtcatgg 120
cgccccgaac cctcctcctg ctactctcgg gggccctggc cctgacccag acctgggcgg 180
gtgagtgcgg ggtcgggagg gaaaccgcct ctgcggggag aagcaagggg ccctcctggc 240
gggggcgcag gaccggggga gccgcgccgg gaggagggtc gggcaggtct cagccactgc 300
tcgcccccag gctcccactc catgaggtat ttcttcacat ccgtgtcccg gcccggccgc 360
ggggagcccc gcttcatcgc cgtgggctac gtggacgaca cgcagttcgt gcggttcgac 420
agcgacgccg cgagccagaa gatggagccg cgggcgccgt ggatagagca ggaggggccg 480
gagtattggg accaggagac acggaatatg aaggcccact cacagactga ccgagcgaac 540
ctggggaccc tgcgcagcta ctacaaccag agcgaggacg gtgagtgacc ccggcccggg 600
gcgcaggtca cgacccctca tcccccacgg acgggccagg tcgcccacag tctccgggtc 660
cgagatccac cccgaagccg cgggactccg agacccttgt cccgggagag gcccaggcgc 720
ctttacccgg tttcattttc agtttaggcc aaaaatcccc ccgggttggt cggggcgggg 780
cggggctcgg gggactgggc tgaccgcggg gtcggggcca ggttctcaca ccatccagat 840
aatgtatggc tgcgacgtgg ggccggacgg gcgcttcctc cgcgggtacc ggcaggacgc 900
ctacgacggc aaggattaca tcgccctgaa cgaggacctg cgctcttgga ccgcggcgga 960
catggcagct cagatcacca agcgcaagtg ggaggcggtc catgcggcgg agcagcggag 1020
agtctacctg gagggccggt gcgtggacgg gctccgcaga tacctggaga acgggaagga 1080
gacgctgcag cgcacgggta ccaggggcca cggggcgcct ccctgatcgc ctatagatct 1140
cccgggctgg cctcccacaa ggaggggaga caattgggac caacactaga atatcaccct 1200
ccctctggtc ctgagggaga ggaatcctcc tgggtttcca gatcctgtac cagagagtga 1260
ctctgaggtt ccgccctgct ctctgacaca attaagggat aaaatctctg aaggagtgac 1320
gggaagacga tccctcgaat actgatgagt ggttcccttt gacaccggca gcagccttgg 1380
gcccgtgact tttcctctca ggccttgttc tctgcttcac actcaatgtg tgtgggggtc 1440
tgagtccagc acttctgagt ctctcagcct ccactcaggt caggaccaga agtcgctgtt 1500
cccttctcag ggaatagaag attatcccag gtgcctgtgt ccaggctggt gtctgggttc 1560
tgtgctctct tccccatccc gggtgtcctg tccattctca agatggccac atgcgtgctg 1620
gtggagtgtc ccatgacaga tgcaaaatgc ctgaattttc tgactcttcc cgtcagaccc 1680
ccccaagaca catatgaccc accaccccat ctctgaccat gaggccaccc tgaggtgctg 1740
ggccctgggc ttctaccctg cggagatcac actgacctgg cagcgggatg gggaggacca 1800
gacccaggac acggagctcg tggagaccag gcctgcaggg gatggaacct tccagaagtg 1860
ggcggctgtg gtggtgcctt ctggagagga gcagagatac acctgccatg tgcagcatga 1920
gggtctgccc aagcccctca ccctgagatg gggtaaggag ggagatgggg gtgtcatgtc 1980
tcttagggaa agcaggagcc tctctggaga cctttagcag ggtcagggcc cctcaccttc 2040
ccctcttttc ccagagctgt cttcccagcc caccatcccc atcgtgggca tcattgctgg 2100
cctggttctc cttggagctg tgatcactgg agctgtggtc gctgccgtga tgtggaggag 2160
gaagagctca ggtggagaag gggtgaaggg tggggtctga gatttcttgt ctcactgagg 2220
gttccaagcc ccagctagaa atgtgccctg tctcattact gggaagcacc ttccacaatc 2280
atgggccgac ccagcctggg ccctgtgtgc cagcacttac tcttttgtaa agcacctgtt 2340
aaaatgaagg acagatttat caccttgatt acggcggtga tgggacctga tcccagcagt 2400
cacaagtcac aggggaaggt ccctgaggac agacctcagg agggctattg gtccaggacc 2460
cacacctgct ttcttcatgt ttcctgatcc cgccctgggt ctgcagtcac acatttctgg 2520
aaacttctct ggggtccaag actaggaggt tcctctagga ccttaaggcc ctggctcctt 2580
tctggtatct cacaggacat tttcttccca cagatagaaa aggagggagt tacactcagg 2640
ctgcaagtaa gtatgaagga ggctgatgcc tgaggtcctt gggatattgt gtttgggagc 2700
ccatggggga gctcacccac cccacaattc ctcctctagc cacatcttct gtgggatctg 2760
accaggttct gtttttgttc taccccaggc agtgacagtg cccagggctc tgatgtgtct 2820
ctcacagctt gtaaaggtga gagcttggag ggcctgatgt gtgttgggtg ttgggtggaa 2880
cagtggacac agctgtgcta tggggtttct ttgcgttgga tgtattgagc atgcgatggg 2940
ctgtttaagg tgtgacccct cactgtgatg gatatgaatt tgttcatgaa tatttttttc 3000
tatagtgtga gacagctgcc ttgtgtggga ctgagaggca agagttgttc ctgcccttcc 3060
ctttgtgact tga 3073
//