Dbfetch
ID MN640635; SV 1; linear; genomic DNA; STD; HUM; 4302 BP. XX AC MN640635; XX DT 03-FEB-2020 (Rel. 143, Created) DT 03-FEB-2020 (Rel. 143, Last updated, Version 1) XX DE Homo sapiens isolate BY01976 MHC class I antigen (HLA-C) gene, HLA-C*01:08 DE allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-4302 RA Hurley C.K.; RT ; RL Submitted (01-NOV-2019) to the INSDC. RL CW Bill Young Marrow Donor Recruitment and Research Program, Georgetown RL University, 11333 Woodglen Drive, Department of Oncology Georgetown RL University Medical Center CW Bill Young Marrow Donor Recruitment and RL Research Program Room 337, Rockville, MD 20852, USA XX DR MD5; b76ef36d26f53ebdfacf95ef37cb1fec. XX CC ##Assembly-Data-START## CC Assembly Method :: Assign TruSight v. HLA2.1.0.934; CC Sequencher v. V5.4.6; GenDx v. V1.9.3.4077 CC Sequencing Technology :: Illumina; Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..4302 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="BY01976" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>4302 FT /gene="HLA-C" FT /allele="HLA-C*01:08" FT mRNA join(<495..567,698..967,1214..1489,2077..2352,2474..2593, FT 3033..3065,3173..3220,3385..>3389) FT /gene="HLA-C" FT /allele="HLA-C*01:08" FT /product="MHC class I antigen" FT CDS join(495..567,698..967,1214..1489,2077..2352,2474..2593, FT 3033..3065,3173..3220,3385..3389) FT /codon_start=1 FT /gene="HLA-C" FT /allele="HLA-C*01:08" FT /product="MHC class I antigen" FT /protein_id="QHQ71295.1" FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMKYFFTSVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN FT LRGYYNQSEAGSHTLQWMCGCDLGPDGRLLRGYDQYAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAACEAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVMVPSGEEQRY FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" XX SQ Sequence 4302 BP; 832 A; 1203 C; 1296 G; 971 T; 0 other; tattttgctg gatgtagttt aatattacct gaggtaaggt aaggcaaaga gtgggaggca 60 gggagtccag ttcagggacg gggattccag gagaagtgaa ggggaagggg ctgggcgcag 120 cctgggggtc tctccctggt ttccacagac agatccttgg ccaggactca ggcacacagt 180 gtgacaaaga tgcttggtgt aggagaagag ggatcaggac gaagtcccag gtcccgggcg 240 gggttctcag ggtctcaggc tccaagggcc gtgtctgcac tggggaggcg ccgcgttgag 300 gattctccac tcccctgagt ttcacttctt ctcccaacct gcgtcgggtc cttcttcctg 360 aatactcatg acgcgtcccc aattcccact cccattgggt gtcgggttct agagaagcca 420 atcagcgtct ccgcagtccc ggttctaaag tccccagtca cccacccgga ctcagattct 480 ccccagacgc cgagatgcgg gtcatggcgc cccgaaccct catcctgctg ctctcgggag 540 ccctggccct gaccgagacc tgggcctgtg agtgcggggt tgggagggaa acggcctctg 600 cggagaggaa cgaggtgccc gcccggcgag ggcgcaggac ccggggagcc gcgcagggag 660 gagggtcggg cgggtctcag cccctcctcg cccccaggct cccactccat gaagtatttc 720 ttcacatccg tgtcccggcc tggccgcgga gagccccgct tcatctcagt gggctacgtg 780 gacgacacgc agttcgtgcg gttcgacagc gacgccgcga gtccgagagg ggagccgcgg 840 gcgccgtggg tggagcagga ggggccggag tattgggacc gggagacaca gaagtacaag 900 cgccaggcac agactgaccg agtgagcctg cggaacctgc gcggctacta caaccagagc 960 gaggccggtg agtgaccccg gcccggggcg caggtcacga cccctcctca tcccccacgg 1020 acggcccggg tcgccccaag tctcccggtc tgagatccac cccgaggctg cggaacccgc 1080 ccagaccctc gaccggagag agccccagtc acctttaccc ggtttcattt tcagtttagg 1140 ccaaaatccc cgcgggttgg tcgggactgg ggcggggctc gggggacggg gctgaccacg 1200 ggggcggggc cagggtctca caccctccag tggatgtgtg gctgcgacct ggggcccgac 1260 gggcgcctcc tccgcgggta tgaccagtac gcctacgacg gcaaggatta catcgccctg 1320 aacgaggacc tgcgctcctg gaccgccgcg gacaccgcgg ctcagatcac ccagcgcaag 1380 tgggaggcgg cctgtgaggc ggagcagcgg agagcctacc tggagggcac gtgcgtggag 1440 tggctccgca gatacctgga gaacgggaag gagacgctgc agcgcgcggg taccaggggc 1500 agtggggagc cttccccatc tcccgtagat ctcccggcat ggcctcccac gaggagggga 1560 ggaaaatggg atcagcgcta gaatatcgcc ctcccttgaa tggagaatgg gatgagtttt 1620 cctgagtttc ctctgagggc cccctctgct ctctaggaca attaagggat gaagtccttg 1680 aggaaatgga ggggaagaca gtccctggaa tactgatcag gggtcccctt tgaccacttt 1740 gaccactgca gcagctgtgg tcaggctgct gacctttctc tcaggccttg ttctctgcct 1800 cacgctcaat gtgtttgaag gtttgattcc agcttttctg agtccttcgg cctccactca 1860 ggtcaggacc agaagtcgct gttcctccct cagagactag aactttccaa tgaataggag 1920 attatcccag gtgcctgtgt ccaggctggc gtctgggttc tgtgccccct tccccacccc 1980 aggtgtcctg tccattctca ggatggtcac atgggcgctg ttggagtgtc gcaagagaga 2040 tacaaagtgt ctgaattttc tgactcttcc cgtcagaaca cccaaagaca cacgtgaccc 2100 accatcccgt ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg 2160 cggagatcac actgacctgg cagtgggatg gggaggacca aactcaggac accgagcttg 2220 tggagaccag gccagcagga gatggaacct tccagaagtg ggcagctgtg atggtgcctt 2280 ctggagaaga gcagagatac acgtgccatg tgcagcacga ggggctgccg gagcccctca 2340 ccctgagatg gggtaaggag ggggatgagg ggtgatgtgt cttctcaggg aaagcagaag 2400 tcctggagcc cttcagccgg gtcagggctg aggcttggag gtcagggccc ctcaccttcc 2460 cctcctttcc cagagccgtc ttcccagccc accatcccca tcgtgggcat cgttgctggc 2520 ctggctgtcc tggctgtcct agctgtccta ggagctgtgg tggctgttgt gatgtgtagg 2580 aggaagagct caggtaggga aggggtgagg agtggggtct gggttttctt gttccactgg 2640 gagtttcaag ccccaggtag aagtgtgccc cacctcgtta ctggaagcac catccacaca 2700 tgggccatcc cagcctggga ccctgtgtgc cagcacttac tctgttgtga agcacatgac 2760 aatgaaggac agatgtatca ccttgatgat tatggtgttg gggtccttga ttccagcatt 2820 catgagtcag gggaaggtcc ctgctaagga cagaccttag gagggcagtt gcttcagaac 2880 ccacagctgc tttccccgtg tttcctgatc ctgccctggg tctgcagtca tagttctgga 2940 aacttctctt gggtccaaga ctaggaggtt cccctaagat cgcatggccc tgcctcctcc 3000 ctgtcccctc acagggcatt ttcttcccac aggtggaaaa ggagggagct gctctcaggc 3060 tgcgtgtaag tgatggcggt gggcgtgtgg aggagctcac ccaccccata attcctcttg 3120 tcccacatct cctgcgggct ctgaccaggt cttttttttt gttctacccc agccagcaac 3180 agtgcccagg gctctgatga gtctctcatc gcttgtaaag gtgagattct ggggagctga 3240 agtggtcggg ggtggggcag agggaaaagg cctaggtaat ggggatcctt tgattgggac 3300 gtttcgaatg tgtggtgagc tgttcagagt gtcatcactt accatgactg acctgaattt 3360 gttcatgact attgtgttct gtagcctgag acagctgcct gtgtgggact gagatgcagg 3420 atttcttcac acctctcctt tgtgacttca agagcctctg gcatctcttt ctgcaaaggc 3480 atctgaatgt gtctgcgttc ctgttagcat aatgtgagga ggtggagaga cagcccaccc 3540 ccgtgtccac cgtgacccct gtccccacac tgacctgtgt tccctccccg atcatctttc 3600 ctgttccaga gaagtgggct ggatgtctcc atctctgtct caacttcatg gtgcgctgag 3660 ctgcaacttc ttacttccct aatgaagtta agaacctgaa tataaatttg ttttctcaaa 3720 tatttgctat gaagggttga tggattaatt aaataagtca attcctggaa gttgagagag 3780 caaataaaga cctgagaacc ttccagaatc cgcatgttcg ctgtgctgag tctgttgcag 3840 gtgggggtgg ggaaggctgt gaggagacga gtgtggacgg ggcctgtgcc tagttgctgt 3900 tcagttcttc atgggcttta tgtggtcagt cctcagctgg gtcaccttca ctgctccatt 3960 gtccttgtcc cttcagtgga aacttgtcca gcgggagctg tgaccacaga ggctcacaca 4020 tcgcccaggg cagcccctgc acacgggagt ccctgtgctt tctgagacaa attttcagac 4080 ccagtcagct cctgccctcc ttctagggct cctcttctgc tttggtctcc tgccctctct 4140 cccttccctg attccagtga tcttcgtgct gactccaatc ccaactcatg aatctaaagc 4200 agagcctaat ttagatttat atttgtttgt aaaattgggt ccatagtcta gaattgttcc 4260 ttcctgaaga gagaaacctg attgtgtgct gcagtgtgcg gg 4302 //