Dbfetch
ID MN630154; SV 1; linear; genomic DNA; STD; HUM; 7262 BP. XX AC MN630154; XX DT 20-NOV-2019 (Rel. 143, Created) DT 20-NOV-2019 (Rel. 143, Last updated, Version 1) XX DE Homo sapiens MHC class II antigen (HLA-DQB2) gene, DE HLA-DQB2*01:01:02:01_ADN117_N allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-7262 RA Walencik A.; RT ; RL Submitted (29-OCT-2019) to the INSDC. RL PFBI, EFS, rue Pierre Jean Gineste, Rennes, Bretagne 35016, France XX DR MD5; 968ae7a98e98e76933c819aade071970. XX CC ##Assembly-Data-START## CC Assembly Method :: TSV v. 1.05 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..7262 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <145..>7162 FT /gene="HLA-DQB2" FT /allele="HLA-DQB2*01:01:02:01_ADN117_N" FT mRNA join(<145..241,1689..1955,4484..4765,7149..>7162) FT /gene="HLA-DQB2" FT /allele="HLA-DQB2*01:01:02:01_ADN117_N" FT /product="MHC class II antigen" FT CDS join(145..241,1689..1955,4484..4765,7149..7162) FT /codon_start=1 FT /gene="HLA-DQB2" FT /allele="HLA-DQB2*01:01:02:01_ADN117_N" FT /product="MHC class II antigen" FT /protein_id="QGH82678.1" FT /translation="MALQIPGGFWAAAVTVMLVMLSTPVAEARDFPKDFLVQFKGMCYF FT TNGTERVRGVARYIYNREEYGRFDSDVGEFQAVTELGRSIEDWNNYKDFLEQERAAVDK FT VCRHNYEAELRTTLQRQVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRWFRNDQ FT EETAGVVSTSLIRNGDWTFQILVMLEITPQRGDIYTCQVEHPSLQSPITVEWRLLH" XX SQ Sequence 7262 BP; 1875 A; 1633 C; 1793 G; 1961 T; 0 other; tcctttccta gggattcccc aatcctacca cacatggaaa catccagagg tttttattct 60 ttccggcagg tacataagat ccattaggtt tgagctgtgt tgactaccac tgctttttcc 120 ttggtctcac ttacgtcttg gaagatggct ctgcagatcc ctggaggctt ttgggcagca 180 gctgtgaccg tgatgctggt gatgctgagc accccagtgg ctgaggccag agactttccc 240 agtaagtgca gggcagctgc tctcgagagc caccactgtg ggaacaggct ctccttgggt 300 tggagtatgg gggatggtga tctccatgat ctcagaacac agtcttttat caccatttat 360 tctttttggg aaatagagct atgttgcatt tttatttcca ccttataatg ggtgaggtga 420 ggataatcca accccaatcc cacaggttta agcctgaagg aggagagagg aaagaggaga 480 caaagtgtgc attcactacc tgtgacagga caaaatgacc atggcactcc acggttatgc 540 atttccccaa agatatgcat ttccccaaag acacagtagg atttttctgc actgggaaaa 600 tgtaaggcag caatggtgtc tgtagtctct gtattggagg taaaggagtc tatactactg 660 actcgagtgg agagtttgtg gaggcaaact cttagtactg agggaaggtg actggatgac 720 cacagacagg gagtcttact ttgggtttca ctgatttatg ggcaaaaggt gacttgagtg 780 ggattcaggg acctgagttg atggtggact gaatttagta tgataggaag gaggaagtaa 840 agaagggaaa taatacatat tgagaaacca ctccattcag acacaggaca gtactttcta 900 taaatcctct ctcactcctc ctaacatcct atgtgtaggt atcatgattt tccttttatg 960 taattatact tgtgatatgg atattctgtt aagtaacctg cccaagctgg tgattgactc 1020 agtttaattg gaccctatag aattcaaaag cttgggctct ttccatgaat aaatgtttcc 1080 ttctaggact ccggaggtgt aggtcctttc taacacagaa gtgagtgaac ctcacagggc 1140 acttgggcgg gtatagcaga aagagagtaa atccaggcat gggtttactt ggtctcttgc 1200 ccagggacca agagaatact tacatcagga tgagaacaag cttaattcct gaacctttct 1260 cgttattccc ttgaactctc aaatttatgt ggataactct gtctctgaga ttcccaagag 1320 ctccatggaa aatgggattt catacgagaa cgccctgatc taagagcaga ggtcaatgtc 1380 gaatcggtcc gactgccctc ttcacttggt tcacaggctc aggcagggac tgggctttcc 1440 ctcttacctc cctaaaggaa ggcagattcc cgaggccctc agagagggcg ggcagggctg 1500 gggcagagat gtctcgagga tcccaggtcc ggagcacgag gcacgggccc agccaagaac 1560 tcaatttcgc ttggacgggt ttcgcagctg ctggccgggt cagggcagcg gctgaagggt 1620 gcggtccggc tgggggctgg ggctagggcc gtgctggcgc ctgactgacc cgccgtgatt 1680 ctccgcagag gatttcttgg tccagtttaa gggcatgtgc tacttcacca acgggacaga 1740 gcgcgtgcgg ggtgtggcca gatacatcta taaccgcgag gagtacgggc gcttcgacag 1800 cgacgttggg gagttccagg cggtgaccga gctggggcgg agcatcgagg actggaacaa 1860 ctataaggac ttcttggagc aggagcgggc cgcggtggac aaggtgtgca gacacaacta 1920 cgaggcggag ctacgcacga ccttgcagcg gcaaggtgag cgtcgtcgtc cttccgcggg 1980 gctcaccctt ggccggggcc cgagtctctt gcgcacagag gggcgaggac ggcgcggcct 2040 caaggaccga gccctgatcc atcccagggt acaggaaggt ggcggggatt tggaggctgg 2100 ggtagtatcg gaggggcggg gatctagggc agagcagggg gatgcacaaa agcatccctt 2160 agttccctgc agggttgggt taggctgccc agtgtgtccc cagcctcccc gtccatcggc 2220 cttgtcctct gctctgcatg ttcttgcctt gtgccttatg cgtttgcctc ctcgtgcctt 2280 accttcgcta agcagttctt tctgcccgaa tgcccgccct cttcccctgc ccgtccgccc 2340 cactagcact gccccaccca gcaaggccca cttgcacagc tcgcgccgca ggaagcttca 2400 ggcttggcct ggtggagtta gggctgctcc acaactgcgc gcagggcatc cagcaattac 2460 agttgtgaaa taagatattt taacttttgg cttcaaatta ttattcatcg taattctgtt 2520 ttcttaaacg gctctcattc atggcggagc tctttgaggt gagagtgttt taatcattgc 2580 atgcctagta cctgactcgt ggaccggcat gtggtatgag ctcaatgatc ttctgttaaa 2640 ttaatgaata aatgtactca gctgcccatc cacttaggct caagggaaag cagaggataa 2700 atagagcctt aaagatggac tttatcaatt attttctatt attttgctta atgctgtaaa 2760 ctcttattga cttggatctt agtaaggttt gtgaatgcag tctggggaaa aaggtgtttg 2820 ctgaaaataa aaacaacgct tgaatggtgt tataaggcag ttttaatttc ttagaaaagc 2880 tgaacaaatg gcacaatgaa aagagcagaa gctttggaat acatagattg aagccactaa 2940 attattgaat aaaaatagtt tcaggttgct tttggagtag attttctccc tccccccatc 3000 actatccact tcaggcataa acattctgaa cgtcaatttt acccacttag tgagcactta 3060 tttctagaca attgccttag caaacaccat ctaagttatg tcatttaata gcacagttac 3120 ctgtgcatta gagattagca ttgccacttt atatatcgta atattggtac atgataaaca 3180 ctttaagtaa tcaacccaca gttatgcacc aggacctgaa gcctccccca aatacacagc 3240 attcttttat gttcttcaat actcgtctac acagcctaag ggaagtaaag ccttgttaaa 3300 gccaattttg acaagaagca gcaatgggtc tattcctgcc tgttttcact gttaatggga 3360 caaaatgata ctttcaaggc attgaaaatt cactgattaa tcaatcccta gtctgacccc 3420 agtgttatct atgcaggttc acaaaacttc cttgccttct tctgacccac atcctaatgc 3480 tgtcaattat ttatattttt gccatttcaa gtctatttct ataaaagtta ttctatcatt 3540 tttttctcat gaatttgtgc cctctatttt tactttcagt ctttttaaga tgaacaaatc 3600 ttgtaagtcc ccacatagct gactgttatt tcagtcagac tccaggaagg agggcctaaa 3660 gaaaagttca agtccaagca gaaaccaaga ttccttccag acaatggctc atgagtgcca 3720 tttaattggg gtgctacctg ctgacctcag caaatcccag ctatatgtat atgtttgcat 3780 tacaggcaca ttcacccagg ccaacctctg catggatctc agaatatttc ctatggagaa 3840 cgtacatgat aatgtctgat ttcagaacaa gaaagtaatt ctcaatagca aggggatgga 3900 gtagggtagg cagctagtaa ttacactatc ttgagggtta aaaggaaatt aagaaaaagc 3960 aggaaaatga gagaacatat taccaagtaa ataaagcata cattaaatat ttactataat 4020 tttacactaa agaaataaag gaaatgcagt aaaatggcca gagaggtaaa ggttaagatg 4080 tataaaatat gcagggaaag gtgtgtcatt tttgaccatg agcagcgctc tgagaagata 4140 aaggaattga gttatgggca aacatgatgt ttgatcagtg ttagtttttt tcaaggcctg 4200 cctacttttc cttcaaatat tacaaacttt tgaaataaca ttcaattttt tggtctctgt 4260 tactagattg caagttctat aaaggcagga accagggttt gttgtttatt tttggattct 4320 cagtgattgt caaatttata tttgttgaag gaaccttaat ccaagacttg gactccaggt 4380 atctttctat tctggttcca aggagggacc ttcctcacag caggcgtgct gtgtggtctc 4440 acatctcact cctatatctt tccctgtctg ttactgccct cagtggagcc cacagtgacc 4500 atctccccat ccaggacaga ggccctcaac caccacaacc tgctggtctg ctcggtgaca 4560 gatttctatc cagcccagat caaagtccgg tggtttcgga atgaccagga ggagacagcc 4620 ggtgttgtgt ccacctccct cattaggaat ggtgactgga ccttccagat tctggtgatg 4680 ctggaaataa ctccccagcg tggagacatc tacacctgcc aagtggagca ccccagcctc 4740 cagagcccca tcaccgtgga gtggcgtaag gggaaactgg tttcctttta ctgtgggccc 4800 cacaagacaa agggcagagc tcccgctgat ccttcccatc ccatctcttg tccctgacat 4860 cactactgag ctgggaatca caggagacta gagcacctgt tgccccatgg caagcacatc 4920 agatgaatcc tgatctcttt gtctttccag ataccaggga gatcactttc cacatttgtg 4980 ttagtccatt cttgtactgc tacaaagaaa tctctgagac tgagtaattt ataaagaaaa 5040 gaggtttaat tggctcttct cactccacta taaagaaata cctgagaatg ggtaatttat 5100 aaagagaaga ggtttaattg gcttatgatt ctgaggctgt aggggaagca tagtggcttc 5160 tgcttatggg gagacatatg gaagctccta atcatggcag aaggaaaaga gggagtgagg 5220 tgtctcacag ggcaggggca ggagcatgag agagaggggg ttggtgctac gcagttttac 5280 ataaccagat ctcatgagaa ctcactattg taatgacagt actaagggag atggtgacaa 5340 gaatctggtc taatgatcca gtcacctccc accaggctct acctccaaca ttgttaatta 5400 caattgaaca tgaaatttgg gtggggccac agaatcaaac catatcaaca ctactaaagc 5460 cccagaacca gctctgacag ctatgagaga ctgacttagg gctggtgact ggggccttag 5520 ggtttaaggt tatggatgaa gtcctgaggg gcaggggtgt gcttcttcct ctccctcacc 5580 cacctattgt gtccaaagac ctactggctg gtctttctct tccctagggt ggtcagactg 5640 gagaactagt gtcccctgac atctccacct cctgtaccaa ggacattatg gggtgtgggg 5700 acaaacactc acactcagtt ctgctcctta ggggctcagt ctgaatctgc ccagagcaag 5760 atgctgagtg gcattggagg cttcgtgctg gggctgatct tcctcgggct gggccttatc 5820 atccgtcaca ggggtcagaa aggtgaggaa cccaaggggg aaatggggaa gatgagctgt 5880 gacccagacc ctctattcag agaggttctg tctctagatg tagctctttc ctccttaccc 5940 tgagaggaag tgcgaggaga caggacaaga ttggaggagg cattggaatc tgattttact 6000 gggtgaatgg tagcgctgcc agagctgact gatagagctt attccagggc gtccttaccg 6060 ttcatcatcg tctcactggc tcctttctaa aagcttcctc cattatgagg gtcagagcct 6120 cggcctcctt gtcttctagt gacaatttcc tttgttttgg gggattttaa cttagggtgc 6180 ttaaggactt aaagaacatg ggagggaaga ggatataacc ccaattaaac tacatgtgtc 6240 attttccttt ggggtaagat agtggttgtt tgtttaacaa gacctttctc tgtataactt 6300 ccttttgtag gacctcgagg gcctccacca gcaggtaata tttcagccat gatccagtca 6360 ggggagaggg cacaggcata agagggaaga gccatggtga aaccgcatct ctactaaaaa 6420 tacaaaaatt agctggacgt ggtggtgtgc atctgtaatc ccggctactt gggaggttga 6480 ggcaagagaa tcacttgaac ccaggaggca gaggttgcag tgagccaaga tggcgccact 6540 gcactccagt ctgggcgata gagctagagt ctgtctcaaa aaaaaaaaag aagagcatga 6600 gcggagtgtt ccagggcaca gtggtctctg ttcatggcct gtttgctgct atgagggtta 6660 agacttaggg gaaaagtttg ccagtttcta cgaatctcca gagattgttt cctagaacca 6720 ggccttaact ttggtggcat ctttttgtga aatgtgggga cagagccaca tcttgaatgt 6780 gagatagtag ggtgatgccc actttgtgcc acattttgtt agctactgcc tgtaggcatt 6840 ttcagtgact aaaagaggct gctagtggtg gagatgaagt gtcacccaat ttactaaaaa 6900 aatcaaactc ttcatattac ccagaagggt aactgctgtt cccccacctc cacatatctg 6960 catcaagctg aagttctgtg tcctcatgag ctgattttac ctttacacag atattgggga 7020 acgtgatgat gatatgccct ggacctcagc atcctctgtt tgatgctaca gagggaactg 7080 aggactaggg gagagggtgt gtccctcagg gtaccctgtg ctgatcatgc ctcgtctctc 7140 ttctccagga ctcctgcact gactcctgag gacttttgtc tgggattggt catcactctt 7200 ctgtaatgcc cacctgcccc tgcccagaat tcctagctgc ctgtgtcacc ctgtcccact 7260 ga 7262 //