Dbfetch

Dbfetch

ID   MN565783; SV 1; linear; genomic DNA; STD; HUM; 863 BP.
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AC   MN565783;
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DT   29-OCT-2019 (Rel. 142, Created)
DT   29-OCT-2019 (Rel. 142, Last updated, Version 1)
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DE   Homo sapiens MHC class II antigen (HLA-DQB1) gene, HLA-DQB1*02:var allele,
DE   partial cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-863
RA   Fuerst D., Tsamadou C., Gowdavally S., Ahci-Hanci M., Mytilineos J.;
RT   "HLA-DQB1*02:var, a novel HLA-DQB1 allele";
RL   Unpublished.
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RN   [2]
RP   1-863
RA   Fuerst D., Tsamadou C., Gowdavally S., Ahci-Hanci M., Mytilineos J.;
RT   ;
RL   Submitted (14-OCT-2019) to the INSDC.
RL   Transplant Immunology, Institute for Clinical Transfusion Medicine Ulm,
RL   Helmholtzstr.10, Ulm, BW 89077, Germany
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DR   MD5; 3baf80720b4130dc6c99804c9660bb3c.
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..863
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /tissue_type="blood"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>863
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*02:var"
FT   mRNA            join(<1..270,371..652,753..>863)
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*02:var"
FT                   /product="MHC class II antigen"
FT   CDS             join(<1..270,371..652,753..>863)
FT                   /codon_start=3
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*02:var"
FT                   /product="MHC class II antigen"
FT                   /protein_id="QFR42328.1"
FT                   /translation="DFVYQFKGMCYFTNGTERVRLVSRSIYNREEIVRFDSDVGEFRAV
FT                   TLLGLPAAEYWNSQKDILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEAL
FT                   NHHNLLVCSVTDFYPAQIKVRWFRNDQEETAGVVSTPLIRNGDWTFQIPVMLEMTPQRG
FT                   DVYTCHVEHPSLQSPITVEWRAQSESAQSKMLSGIGGFVLGLIFLGLGLIIHHRSQK"
FT   gap             271..370
FT                   /estimated_length=unknown
FT   gap             653..752
FT                   /estimated_length=unknown
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SQ   Sequence 863 BP; 146 A; 187 C; 205 G; 125 T; 200 other;
     aggatttcgt gtaccagttt aagggcatgt gctacttcac caacgggaca gagcgcgtgc        60
     gtcttgtgag cagaagcatc tataaccgag aagagatcgt gcgcttcgac agcgacgtgg       120
     gggagttccg ggcggtgacg ctgctggggc tgcctgccgc cgagtactgg aacagccaga       180
     aggacatcct ggagaggaaa cgggcggcgg tggacagggt gtgcagacac aactaccagt       240
     tggagctccg cacgaccttg cagcggcgag nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnnnnnnnn tggagcccac agtgaccatc tccccatcca ggacagaggc cctcaaccac       420
     cacaacctgc tggtctgctc ggtgacagat ttctatccag cccagatcaa agtccggtgg       480
     tttcggaatg accaggagga gacagctggc gttgtgtcca ccccccttat taggaatggt       540
     gactggacct tccagatccc ggtgatgctg gaaatgactc cccagcgtgg agacgtctac       600
     acctgccacg tggagcaccc cagcctccag agccccatca ccgtggagtg gcnnnnnnnn       660
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       720
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nngggctcaa tctgaatctg cccagagcaa       780
     gatgctgagt ggcattggag gcttcgtgct ggggctgatc ttcctcgggc tgggccttat       840
     catccatcac aggagtcaga aag                                               863
//