Dbfetch

Dbfetch

ID   MN514876; SV 1; linear; genomic DNA; STD; HUM; 987 BP.
XX
AC   MN514876;
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DT   08-OCT-2019 (Rel. 142, Created)
DT   08-OCT-2019 (Rel. 142, Last updated, Version 1)
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DE   Homo sapiens MHC class II antigen (HLA-DRB1) gene, HLA-DRB1*12:NEW allele,
DE   partial cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-987
RA   Cargou M., Elsermans V., Top I., Blouin L., Jonathan V.;
RT   "Characterization of the novel HLA-DRB1*12:XX allele by sequencing-based
RT   typing";
RL   Unpublished.
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RN   [2]
RP   1-987
RA   Cargou M., Elsermans V., Top I., Blouin L., Jonathan V.;
RT   ;
RL   Submitted (23-SEP-2019) to the INSDC.
RL   Laboratoire d'Immunologie et d'Immunogenetique, Chu Bordeaux, Place Amelie
RL   Raba Leon, Bordeaux, Gironde 33076, France
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DR   MD5; de6dfae567db174acbf34a53ae867f1d.
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CC   ##Assembly-Data-START##
CC   Assembly Method       :: TypeStream Visual v. 1.3.0; MIA FORA FLEX
CC                            v. 4
CC   Sequencing Technology :: Illumina; IonTorrent
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..987
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /tissue_type="kidney"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>987
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*12:NEW"
FT   mRNA            join(<1..270,371..652,753..863,964..>987)
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*12:NEW"
FT                   /product="MHC class II antigen"
FT   CDS             join(<1..270,371..652,753..863,964..>987)
FT                   /codon_start=3
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*12:NEW"
FT                   /product="MHC class II antigen"
FT                   /protein_id="QEY10682.1"
FT                   /translation="RFLEYSTGECYFFNGTERVRLLERHFHNQEELLRFDSDVGEFRAV
FT                   TELGRPVAESWNSQKDILEDRRAAVDTYCRHNYGAVESFTVQRRVHPKVTVYPAKTQPL
FT                   QHHNLLVCSVSGFYPGSIEVRWFRNGQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSG
FT                   EVYTCQVEHPSVTSPLTVEWRARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGH
FT                   SGLQPR"
FT   gap             271..370
FT                   /estimated_length=unknown
FT   gap             653..752
FT                   /estimated_length=unknown
FT   gap             864..963
FT                   /estimated_length=unknown
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SQ   Sequence 987 BP; 149 A; 174 C; 224 G; 140 T; 300 other;
     cacgtttctt ggagtactct acgggtgagt gttatttctt caatgggacg gagcgggtgc        60
     ggttactgga gagacacttc cataaccagg aggagctcct gcgcttcgac agcgacgtgg       120
     gggagttccg ggcggtgacg gagctggggc ggcctgtcgc cgagtcctgg aacagccaga       180
     aggacatcct ggaagacagg cgcgccgcgg tggacaccta ttgcagacac aactacgggg       240
     ctgtggagag cttcacagtg cagcggcgag nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnnnnnnnn tccatcctaa ggtgactgtg tatcctgcaa agacccagcc cctgcagcac       420
     cacaacctcc tggtctgttc tgtgagtggt ttctatccag gcagcattga agtcaggtgg       480
     ttccggaatg gccaggaaga gaagactggg gtggtgtcca cgggcctgat ccacaatgga       540
     gactggacct tccagaccct ggtgatgctg gaaacagttc ctcggagtgg agaggtttac       600
     acctgccaag tggagcaccc aagcgtgaca agccctctca cagtggaatg gannnnnnnn       660
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       720
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nngagcacgg tctgaatctg cacagagcaa       780
     gatgctgagt ggagtcgggg gctttgtgct gggcctgctc ttccttgggg ccgggctgtt       840
     catctacttc aggaatcaga aagnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       900
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       960
     nnngacactc tggacttcag ccaagag                                           987
//