Dbfetch
ID MN461233; SV 1; linear; genomic DNA; STD; HUM; 2727 BP. XX AC MN461233; XX DT 15-MAY-2020 (Rel. 144, Created) DT 15-MAY-2020 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*15:31:01:02 allele, DE exons 1 through 7 and complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2727 RA Vianna R., Porto L.C.; RT ; RL Submitted (13-SEP-2019) to the INSDC. RL Laboratorio de Histocompatibilidade e Criopreservacao - HLA/UERJ, Rio de RL Janeiro State University, Av Marechal Rondon 381, Rio de Janeiro, RJ RL 20950-003, Brazil XX DR MD5; 77c7f5494723f7d8b142a117777364a2. XX CC ##Assembly-Data-START## CC Assembly Method :: Omixon HLA Twin v. 3.1.3; TypeStream CC Visual v. 1.3.0 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2727 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="HLA-UERJ-103161" FT /db_xref="taxon:9606" FT gene <1..>2727 FT /gene="HLA-B" FT /allele="HLA-B*15:31:01:02" FT mRNA join(<1..108,237..506,752..1027,1603..1878,1983..2099, FT 2541..2573,2680..>2727) FT /gene="HLA-B" FT /allele="HLA-B*15:31:01:02" FT /product="MHC class I antigen" FT exon <1..108 FT /gene="HLA-B" FT /allele="HLA-B*15:31:01:02" FT /number=1 FT 5'UTR <1..35 FT /gene="HLA-B" FT /allele="HLA-B*15:31:01:02" FT CDS join(36..108,237..506,752..1027,1603..1878,1983..2099, FT 2541..2573,2680..2723) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*15:31:01:02" FT /product="MHC class I antigen" FT /protein_id="QJQ23416.1" FT /translation="MRVTAPRTVLLLLSGALALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDRNTQISKTNTQTYRESLRN FT LRGYYNQSEAGSHTLQRMYGCDVGPDGRLLRGYDQSAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon 237..506 FT /gene="HLA-B" FT /allele="HLA-B*15:31:01:02" FT /number=2 FT exon 752..1027 FT /gene="HLA-B" FT /allele="HLA-B*15:31:01:02" FT /number=3 FT exon 1603..1878 FT /gene="HLA-B" FT /allele="HLA-B*15:31:01:02" FT /number=4 FT exon 1983..2099 FT /gene="HLA-B" FT /allele="HLA-B*15:31:01:02" FT /number=5 FT exon 2541..2573 FT /gene="HLA-B" FT /allele="HLA-B*15:31:01:02" FT /number=6 FT exon 2680..>2727 FT /gene="HLA-B" FT /allele="HLA-B*15:31:01:02" FT /number=7 FT 3'UTR 2724..>2727 FT /gene="HLA-B" FT /allele="HLA-B*15:31:01:02" XX SQ Sequence 2727 BP; 510 A; 818 C; 862 G; 537 T; 0 other; acccacccgg actcagaatc tcctcagacg ccgagatgcg ggtcacggcg ccccgaaccg 60 tcctcctgct gctctcggga gccctggccc tgaccgagac ctgggccggt gagtgcgggt 120 cgggagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg gcgcaggacc 180 cggggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc ccccaggctc 240 ccactccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg agccccgctt 300 catcgcagtg ggctacgtgg acgacaccca gttcgtgagg ttcgacagcg acgccgcgag 360 tccgaggatg gcgccccggg cgccatggat agagcaggag gggccggagt attgggaccg 420 gaacacacag atctccaaga ccaacacaca gacttaccga gagagcctgc ggaacctgcg 480 cggctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc aggtcacgac 540 tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag atccgccccc 600 ctgaggccgc gggacccgcc caaaccctcg accggcgaga gccccaggcg cgtttacccg 660 gtttcatttt cagttgaggc caaaatcccc gcgggttggt cggggcgggg cggggctcgg 720 gggacggggc tgaccgcggg gcctgggcca gggtctcaca ccctccagag gatgtacggc 780 tgcgacgtgg ggccggacgg gcgcctcctc cgcgggtatg accagtccgc ctacgacggc 840 aaggattaca tcgccctgaa cgaggacctg agctcctgga ccgcggcgga cacggcggct 900 cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcagctgag agcctacctg 960 gagggcctgt gcgtggagtg gctccgcaga tacctggaga acgggaagga gacgctgcag 1020 cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg ccggggatgg 1080 cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct cccttgaatg 1140 gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct ctaggacaat 1200 taagggatga cgtctctgag gaaatggagg ggaagacagt ccctaggata gtgatcaggg 1260 gtcccctttg acccctgcag cagccttggg aaccgtgact tttcctctca ggccttgttc 1320 tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt cactttacct 1380 ccactcagat caggagcaga agtccctgtt ccccgctcag agactcgaac tttccaatga 1440 ataggagatt atcccaggtg cctgcgtcca ggctggtgtc tgggttctgt gccccttccc 1500 caccccaggt gtcctgtcca ttctcaggct ggtcacatgg gtggtcctag ggtgtcccat 1560 gagagatgca aagcgcctga attttctgac tcttcccatc agacccccca aagacacatg 1620 tgacccacca ccccatctct gaccatgagg ccaccctgag gtgctgggcc ctgggcttct 1680 accctgcgga gatcacactg acctggcagc gggatggcga ggaccaaact caggacaccg 1740 agcttgtgga gaccagacca gcaggagata gaaccttcca gaagtgggca gctgtggtgg 1800 tgccttctgg agaagagcag agatacacat gccatgtaca gcatgagggg ctgccgaagc 1860 ccctcaccct gagatggggt aaggaggggg atgaggggtc atatctgttc tcagggaaag 1920 caggagccct tctggagccc ttcagcaggg tcagggcccc tcatcttccc ctcctttccc 1980 agagccatct tcccagtcca ccatccccat cgtgggcatt gttgctggcc tggctgtcct 2040 agcagttgtg gtcatcggag ctgtggtcgc tactgtgatg tgtaggagga agagctcagg 2100 tagggaaggg gtgaggggtg gggtctgggt tttcttgtcc cactgggggt ttcaagcccc 2160 aggtagaagt gttccctgcc tcattactgg gaagcagcat ccacacaggg gctaacgcag 2220 cctgggaccc tgtgtgccag cacttactct tttgtgcagc acatgtgaca atgaaggaca 2280 gatgtatcgc cttgatggtt gtggtgttgg ggtcctgatt ccagcattca tgagtcaggg 2340 gaaggtccct gctaaggaca gaccttagga gggcagttgg tccaggaccc acacttgctt 2400 tcctcgtgtt tcctgatcct gccctgggtc tgtagtcata cttctggaaa ttccttttgg 2460 ttccaagacg aggaggttcc tctaagatct catggtcctg cttcctccca gtcccctcac 2520 aggacatttt cttcccacag gtggaaaagg agggagctac tctcaggctg cgtgtaagtg 2580 gtgggggtgg gagtgtggag gaggtcaccc accccataat tcctcctgtc ccacgtctcc 2640 tgcgggctct gaccaggtcc tgtttttgtt ctactccagc cagcgacagt gcccagggct 2700 ctgatgtgtc tctcacagct tgaaaag 2727 //