Dbfetch
ID MN454857; SV 1; linear; genomic DNA; STD; HUM; 3809 BP.
XX
AC MN454857;
XX
DT 04-JAN-2020 (Rel. 143, Created)
DT 04-JAN-2020 (Rel. 143, Last updated, Version 1)
XX
DE Homo sapiens isolate BY01871 MHC class I antigen (HLA-C) gene,
DE HLA-C*05:01:01:16 allele, complete cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-3809
RA Lazaro A., Hou L., Enriquez E., Hurley C.K.;
RT ;
RL Submitted (13-SEP-2019) to the INSDC.
RL Oncology, Georgetown University, 11333 Woodglen Dr, Rockville, MD 20852,
RL USA
XX
DR MD5; 67659fa53b4d9bd61d9d4b1779f92687.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: Assign Tru Sight v. HLA 2.1; GenDex v.
CC V2.13.0.12966; Sequencher v. V5.4.6
CC Sequencing Technology :: Illumina
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..3809
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /isolate="BY01871"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>3809
FT /gene="HLA-C"
FT /allele="HLA-C*05:01:01:16"
FT mRNA join(<496..568,699..968,1215..1490,2078..2353,2475..2594,
FT 3034..3066,3174..3221,3386..>3390)
FT /gene="HLA-C"
FT /allele="HLA-C*05:01:01:16"
FT /product="MHC class I antigen"
FT CDS join(496..568,699..968,1215..1490,2078..2353,2475..2594,
FT 3034..3066,3174..3221,3386..3390)
FT /codon_start=1
FT /gene="HLA-C"
FT /allele="HLA-C*05:01:01:16"
FT /product="MHC class I antigen"
FT /protein_id="QGZ98399.1"
FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMRYFYTAVSRPGRGEPR
FT FIAVGYVDDTQFVQFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVNLRK
FT LRGYYNQSEAGSHTLQRMYGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADKA
FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKKTLQRAEHPKTHVTHHPVSDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPEPLTLRWGPSSQPTIPIVGIVAGLAVLAVLAVLGAVMAVVMCRRKSSGG
FT KGGSCSQAASSNSAQGSDESLIACKA"
XX
SQ Sequence 3809 BP; 752 A; 1070 C; 1164 G; 823 T; 0 other;
ttattttgct ggatgtagtt taatattacc tgaggtaagg taaggcaaag agtgggaggc 60
agggagtcca gttcagggac ggggattcca ggagaagtga aggggaaggg gctgggcgca 120
gcctgggggt ctctccctgg tttccacaga cagatccttg gccaggactc aggcacacag 180
tgtgacaaag atgcttggtg taggagaaga gggatcagga cgaagtccca ggtcccgggc 240
ggggctctca gggtctcagg ctccaagggc cgtgtctgca ctggggaggc gccgcgttga 300
ggattctcca ctcccctgag tttcacttct tcttccaacc tgcgtcgggt ccttcttcct 360
gaatactcat gacgcgtccc caattcccac tcccattggg tgtcgggttc tagagaagcc 420
aatcagcgtc tccgcagtcc cggttctaaa gtccccagtc acccacccgg actcggattc 480
tccccagacg ccgagatgcg ggtcatggcg ccccgaaccc tcatcctgct gctctcggga 540
gccctggccc tgaccgagac ctgggcctgt gagtgcgagg ttgggaggga aacggcctct 600
gcggagagga gcgaggggcc cgcccggcga gggcgcagga cccggggagc cgcgcaggga 660
ggagggtcgg gcgggtctca gcccctcctc gcccccaggc tcccactcca tgaggtattt 720
ctacaccgcc gtgtcccggc ccggccgcgg agagccccgc ttcatcgcag tgggctacgt 780
ggacgacacg cagttcgtgc agttcgacag cgacgccgcg agtccaagag gggagccgcg 840
ggcgccgtgg gtggagcagg aggggccgga gtattgggac cgggagacac agaagtacaa 900
gcgccaggca cagactgacc gagtgaacct gcggaaactg cgcggctact acaaccagag 960
cgaggccggt gagtgacccc ggcccggggc gcaggtcacg acccctcccc atcccccacg 1020
gacggcccgg gtcgccccga gtctcccggt ctgagatcca ccccgaggct gcggaacccg 1080
cccagaccct cgaccggaga gagccccagt cacctttacc cggtttcatt ttcagtttag 1140
gccaaaatcc ccgcgggttg gtcggggctg gggcggggct cgggggacgg ggctgaccac 1200
gggggcgggg ccagggtctc acaccctcca gaggatgtat ggctgcgacc tggggcccga 1260
cgggcgcctc ctccgcgggt ataaccagtt cgcctacgac ggcaaggatt acatcgccct 1320
gaatgaggac ctgcgctcct ggaccgccgc ggacaaggcg gctcagatca cccagcgcaa 1380
gtgggaggcg gcccgtgagg cggagcagcg gagagcctac ctggagggca cgtgcgtgga 1440
gtggctccgc agatacctgg agaacgggaa gaagacgctg cagcgcgcgg gtaccagggg 1500
cagtggggag ccttccccat ctcctgtaga tctcccggga tggcctccca cgaggagggg 1560
aggaaaatgg gatcagcgct ggaatatcgc cctcccttga atggagaatg ggatgagttt 1620
tcctgagttt cctctgaggg ccccctctgc tctctaggac aattaaggga tgaagtcctt 1680
gaggaaatgg aggggaagac agtccctgga atactgatca ggggtcccct ttgaccactt 1740
tgaccactgc agcagctgtg gtcaggctgc tgacctttct ctcaggcctt gttctctgcc 1800
tcacgctcaa tgtgtttaaa ggtttgattc cagcttttct gagtccttcg gcctccactc 1860
aggtcaggac cagaagtcgc tgttcctccc tcagagacta gaactttcca atgaatagga 1920
gattatccca ggtgcctgtg tccaggctgg cgtctgggtt ctgtgccccc ttccccaccc 1980
caggtgtcct gtccattctc aggatggtca catgggcact gttggagtgt cgcaagagag 2040
atacaaagtg tctgaatttt ctgactcttc ccgtcagaac acccaaagac acacgtgacc 2100
caccatcccg tctctgacca tgaggccacc ctgaggtgct gggccctggg cttctaccct 2160
gcggagatca cactgacctg gcagcgggat ggcgaggacc aaactcagga caccgagctt 2220
gtggagacca ggccagcagg agatggaacc ttccagaagt gggcagctgt ggtggtgcct 2280
tctggagaag agcagagata cacgtgccat gtgcagcacg aggggctgcc agagcccctc 2340
accctgagat ggggtaagga gggggatgag gggtcatgtg tcttctcagg gaaagcagaa 2400
gtcctggagc ccttcagccg ggtcagggct gaggcttggg ggtcagggcc cctcaccttc 2460
ccctcctttc ccagggccat cttcccagcc caccatcccc atcgtgggca tcgttgctgg 2520
cctggctgtc ctggctgtcc tagctgtcct aggagctgtg atggctgttg tgatgtgtag 2580
gaggaagagc tcaggtaggg aaggggtgag gagtggggtc tgggttttct tgtcccactg 2640
ggagtttcaa gccccaggta gaagtgtgcc ccacctcgtt actggaagca ccatccacac 2700
atgggccatc ccagcctggg accctgtgtg ctagcactta ctctgttgtg aagcacatga 2760
caatgaagga cagatgtatc accttgatga ttatggtgtt ggggtccttg attccagcat 2820
tcatgagtca ggggaaggtc cctgctaagg acagacctta ggagggcagt tgctccagaa 2880
cccacagctg ctttccccgt gtttcctgat cctgccctgg gtctgcagtc atagttctgg 2940
aaacttctct tgggtccaag actaggaggt tcccctaaga tcgcatggcc ctgcctcctc 3000
cctgtcccct cacagggcat tttcttccca caggtggaaa aggagggagc tgctctcagg 3060
ctgcgtgtaa gtgatggcgg tgggcgtgtg gaggagctca cccaccccat aattcctctt 3120
gtcccacatc tcctgcgggc tctgaccagg tctttttttt tgttctaccc cagccagcaa 3180
cagtgcccag ggctctgatg agtctctcat cgcttgtaaa ggtgagattc tggggagctg 3240
aagtggtcgg gggtggggca gagggaaaag gcctaggtaa tggggatcct ttgattggga 3300
cgtttcgaat gtgtggtgag ctgttcagag tgtcatcact taccatgact gacctgaatt 3360
tgttcatgac tattgtgttc tgtagcctga gacagctgcc tgtgtgggac tgagatgcag 3420
gatttcttca cacctttcct ttgtgacttc aagagcctct ggcatctctt tctgcaaagg 3480
catctgaatg tgtctgcgtt cctgttagca taatgtgagg aggtggagag acagctcacc 3540
cccgtgtcca ccgtgacccc tgtccccaca ctgacctgtg ttccctcccc gatcatcttt 3600
cctgttccag agaagtgggc tggatgtctc catctctgtc tcaactttac gtgtactgag 3660
ctgcaacttc ttacttccct actgaaaata agaatctgaa tataaatttg ttttctcaaa 3720
tatttgctat gagaggttga tggattaatt aaataagtca attcctggaa gttgagagag 3780
caaataaaga cctgagaacc ttccagaat 3809
//