Dbfetch
ID MN276031; SV 1; linear; genomic DNA; STD; HUM; 3869 BP. XX AC MN276031; XX DT 04-JAN-2020 (Rel. 143, Created) DT 04-JAN-2020 (Rel. 143, Last updated, Version 1) XX DE Homo sapiens isolate BY01846 HLA class I histocompatibility antigen (HLA-B) DE gene, HLA-B*15:79N allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3869 RA Lazaro A., Hou L., Enriquez E., Hurley C.K.; RT ; RL Submitted (08-AUG-2019) to the INSDC. RL Oncology, Georgetown University, 11333 Woodglen Dr, Rockville, MD 20852, RL USA XX DR MD5; 4532f8a1a368c88f3ade586d23996371. XX CC ##Assembly-Data-START## CC Assembly Method :: Assign Tru Sight v. HLA 2.1; GenDex v. CC V2.13.0.12966; Sequencher V5.4.6 v. V5.4.6 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3869 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="BY01846" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>3869 FT /gene="HLA-B" FT /allele="HLA-B*15:79N" FT mRNA join(<285..357,487..756,1004..1279,1855..2130,2235..2351, FT 2793..2825,2932..>2975) FT /gene="HLA-B" FT /allele="HLA-B*15:79N" FT /product="HLA class I histocompatibility antigen" FT CDS join(285..357,487..756,1004..1279,1855..2130,2235..2351, FT 2793..2825,2932..2975) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*15:79N" FT /product="HLA class I histocompatibility antigen" FT /protein_id="QGY93952.1" FT /translation="MRVTAPRTVLLLLSGALALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDRETQISKTNTQTYRESLRN FT LRGYYTTRARRSHTLQRMYGCDVGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAAREAEQWRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" XX SQ Sequence 3869 BP; 729 A; 1093 C; 1186 G; 861 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagagcct 60 tgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcaaaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccgt cctcctgctg ctctcgggag ccctggccct gaccgagacc tgggccggtg 360 agtgcggggt cggcagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg 420 gcgcaggacc cggggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg 540 agccccgctt catcgcagtg ggctacgtgg acgacaccca gttcgtgagg ttcgacagcg 600 acgccgcgag tccgaggatg gcgccccggg cgccatggat agagcaggag gggccggagt 660 attgggaccg ggagacacag atctccaaga ccaacacaca gacttaccga gagagcctgc 720 ggaacctgcg cggctactac acaaccagag cgaggccggt gagtgacccc ggcctggggc 780 gcaggtcacg actccccatc ccccacgtac ggcccgggtc gccccgagtc tccgggtccg 840 agatccgccc ccctgaggcc gcgggacccg cccaaaccct cgaccggcga gagccccagg 900 cgcgtttacc cggtttcatt ttcagttgag gccaaaatcc ccgcgggttg gtcggggcgg 960 ggcggggctc gggggacggg gctgaccgcg gggcctgggc cagggtctca caccctccag 1020 aggatgtacg gctgcgacgt ggggccggac gggcgcctcc tccgcgggca tgaccagtcc 1080 gcctacgacg gcaaggatta catcgccctg aacgaggacc tgagctcctg gaccgcggcg 1140 gacacggcgg ctcagatcac ccagcgcaag tgggaggcgg cccgtgaggc ggagcagtgg 1200 agagcctacc tggagggcct gtgcgtggag tggctccgca gatacctgga gaacgggaag 1260 gagacgctgc agcgcgcggg taccaggggc agtggggagc cttccccatc tcctataggt 1320 cgccggggat ggcctcccac gagaagagga ggaaaatggg atcagcgcta gaatgtcgcc 1380 ctcccttgaa tggagaatgg catgagtttt cctgagtttc ctctgagggc cccctcttct 1440 ctctaggaca attaagggat gacgtctctg aggaaatgga ggggaagaca gtccctagga 1500 tagtgatcag gggtcccctt tgacccctgc agcagccttg ggaaccgtga cttttcctct 1560 caggccttgt tctctgcctc acactcagtg tgtttggggc tctgattcca gcacttctga 1620 gtcactttac ctccactcag atcaggagca gaagtccctg ttccccgctc agagactcga 1680 actttccaat gaataggaga ttatcccagg tgcctgcgtc caggctggtg tctgggttct 1740 gtgccccttc cccaccccag gtgtcctgtc cattctcagg ctggtcacat gggtggtcct 1800 agggtgtccc atgagagatg caaagcgcct gaattttctg actcttccca tcagaccccc 1860 caaagacaca tgtgacccac caccccatct ctgaccatga ggccaccctg aggtgctggg 1920 ccctgggctt ctaccctgcg gagatcacac tgacctggca gcgggatggc gaggaccaaa 1980 ctcaggacac cgagcttgtg gagaccagac cagcaggaga tagaaccttc cagaagtggg 2040 cagctgtggt ggtgccttct ggagaagagc agagatacac atgccatgta cagcatgagg 2100 ggctgccgaa gcccctcacc ctgagatggg gtaaggaggg ggatgagggg tcatatctgt 2160 tctcagggaa agcaggagcc cttctggagc ccttcagcag ggtcagggcc cctcatcttc 2220 ccctcctttc ccagagccat cttcccagtc caccatcccc atcgtgggca ttgttgctgg 2280 cctggctgtc ctagcagttg tggtcatcgg agctgtggtc gctactgtga tgtgtaggag 2340 gaagagctca ggtagggaag gggtgagggg tggggtctgg gttttcttgt cccactgggg 2400 gtttcaagcc ccaggtagaa gtgttccctg cctcattact gggaagcagc atccacacag 2460 gggctaacgc agcctgggac cctgtgtgcc agcacttact cttttgtgca gcacatgtga 2520 caatgaagga cagatgtatc gccttgatgg ttgtggtgtt ggggtcctga ttccagcatt 2580 catgagtcag gggaaggtcc ctgctaagga cagaccttag gagggcagtt ggtccaggac 2640 ccacacttgc tttcctcgtg tttcctgatc ctgccctggg tctgtagtca tacttctgga 2700 aattcctttt ggttccaaga cgaggaggtt cctctaagat ctcatggtcc tgcttcctcc 2760 cagtcccctc acaggacatt ttcttcccac aggtggaaaa ggagggagct actctcaggc 2820 tgcgtgtaag tggtgggggt gggagtgtgg aggagctcac ccaccccata attcctcctg 2880 tcccacgtct cctgcgggct ctgaccaggt cctgtttttg ttctactcca gccagcgaca 2940 gtgcccaggg ctctgatgtg tctctcacag cttgaaaagg tgagattctt ggggtctaga 3000 gtgggtgggg tggcgggtct gggggtgggt ggggcagtgg ggaaaggcct gggtaatgga 3060 gattctttga ttgggatgtt tcgcgtgtgt cgtgggctgt tcagagtgtc atcacttacc 3120 atgactaacc agaatttgtt catgactgtt gttttctgta gcctgagaca gctgtcttgt 3180 gagggaccga gatgcaggat ttcttcacgc ctcccctttg tgacttcaag agcctctggc 3240 atctctttct gcaaaggcac ctgaatgtgt ctgcgtccct gttagcataa tgtgaggagg 3300 tggagagaca gcccaccctt gtgtccactg tgacccctgt tcccatgctg atctgtgttt 3360 cctccccagt catctttctt gttccagaga ggtggggctg gatgtctcca tctctgtctc 3420 aactttatgt gcactgagct gcaacttctt acttccctac tgaaaataag aatctgaata 3480 taaatttgtt ttctcaaata tttgctatga gaggttgatg gattaattaa ataagtcaat 3540 tcctggaatt tgaaagagca aataaagacc tgagaacctt ccagaatctg catgttcgct 3600 gtgctgagtc tgttgcaggt ggggtgtgga gaaggctgtg gggggccgag tgtggatggg 3660 gcctgtgccc atttggtgtt gagtccatca tgggctttat gtggttagtc gtcagctggg 3720 tcaccttcac tgctccattg tccttgtccc ttcagtggaa acttgtccag tgggagctgt 3780 gaccacagag gctcacacat cgcccagggt ggcccctgca cacgggggtc tctgtgcatt 3840 ctgagacaaa ttttcagagc cattcacct 3869 //