Dbfetch
ID MN255474; SV 1; linear; genomic DNA; STD; HUM; 3334 BP. XX AC MN255474; XX DT 04-JAN-2020 (Rel. 143, Created) DT 04-JAN-2020 (Rel. 143, Last updated, Version 1) XX DE Homo sapiens isolate BY01711 HLA class I histocompatibility antigen (HLA-A) DE gene, HLA-A*31:30 allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3334 RA Lazaro A., Hou L., Enriquez E., Hurley C.K.; RT ; RL Submitted (02-AUG-2019) to the INSDC. RL Oncology, Georgetown University, 11333 Woodglen Dr, Rockville, MD 20852, RL USA XX DR MD5; 22e7436507dd25c3750594e85b21a7c5. XX CC ##Assembly-Data-START## CC Assembly Method :: Assign Tru Sight v. HLA 2.1; GenDex v. CC V2.13.0.12966; Sequencher v. V5.4.6 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3334 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="BY01711" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>3334 FT /gene="HLA-A" FT /allele="HLA-A*31:30" FT mRNA join(<117..189,319..588,830..1105,1706..1981,2081..2197, FT 2638..2670,2813..2860,3030..>3034) FT /gene="HLA-A" FT /allele="HLA-A*31:30" FT /product="HLA class I histocompatibility antigen" FT CDS join(117..189,319..588,830..1105,1706..1981,2081..2197, FT 2638..2670,2813..2860,3030..3034) FT /codon_start=1 FT /gene="HLA-A" FT /allele="HLA-A*31:30" FT /product="HLA class I histocompatibility antigen" FT /protein_id="QGY93940.1" FT /translation="MAVMAPRTLLLLLLGALALTQTWAGSHSMRYFTTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQERPEYWDQETRNVKAHSQIDRVDLGT FT LRGYYNQSEAGSHTIQMMYGCDVGSDGRFLRGYQQDAYDGKDYIALNEDLRSWTAADMA FT AQITQRKWEAARVAEQWRAYLEGTCVEWLRRYLENGKETLQRTDPPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWASVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVFAGAVVAAVRWRRKSSDRK FT GGSYSQAASSDSAQGSDMSLTACKV" XX SQ Sequence 3334 BP; 642 A; 958 C; 1006 G; 728 T; 0 other; agttctcact cccattgggt gtcgggtttc cagagaagcc aatcagtgtc gtcgcggtcg 60 cggttctaaa gtccgcacgc acccaccggg actcagattc tccccagacg ccgaggatgg 120 ccgtcatggc gccccgaacc ctcctcctgc tactcttggg ggccctggcc ctgacccaga 180 cctgggcggg tgagtgcggg gtcgtgggga aaccgcctct gcggggagaa gcaaggggcc 240 cgcccggcgg gggcgcagga cccgggtagc cgcgccggga ggagggtcgg gcggatctca 300 gccactcctc gcccccaggc tcccactcca tgaggtattt caccacatcc gtgtcccggc 360 ccggccgcgg ggagccccgc ttcatcgccg tgggctacgt ggacgacacg cagttcgtgc 420 ggttcgacag cgacgccgcg agccagagga tggagccgcg ggcgccgtgg atagagcagg 480 agaggcctga gtattgggac caggagacac ggaatgtgaa ggcccactca cagattgacc 540 gagtggacct ggggaccctg cgcggctact acaaccagag cgaggccggt gagtgacccc 600 agcccggggc gcaggtcacg acctctcatc ccccacggac gggccaggtc acccacagtc 660 tccgggtccg agatccaccc cgaagccgcg ggaccccgag acccttgccc cgggagaggc 720 ccaggcgcct ttacccggtt tcattttcag tttaggccaa aaatcccccc gggttggtcg 780 gggccggacg gggctcgggg gactgggctg accgtggggt cggggccagg ttctcacacc 840 atccagatga tgtatggctg cgacgtgggg tcggacgggc gcttcctccg cgggtaccag 900 caggacgcct acgacggcaa ggattacatc gccttgaacg aggacctgcg ctcttggacc 960 gcggcggaca tggcggctca gatcacccag cgcaagtggg aggcggcccg tgtggcggag 1020 cagtggagag cctacctgga gggcacgtgc gtggagtggc tccgcagata cctggagaac 1080 gggaaggaga cgctgcagcg cacgggtacc aggggccacg gggcgcctcc ctgatcgcct 1140 gtagatctcc cgggctggcc tcccacaagg aggggagaca attgggacca acactagaat 1200 atcaccctcc ctctggtcct gagggagagg aatcctcctg ggtttccaga tcctgtacca 1260 gagagtgact ctgaggttcc gccctgctct gtgacacaat taagggataa aatctctgaa 1320 ggaatgacgg gaagacgatc cctcgaatac tgatgagtgg ttccctttga cacacaccgg 1380 cagcagcctt gggcccgtga cttttcctct caggccttgt tctctgcttc acactcaatg 1440 tgtgtggggg tctgagtcca gcacttctga gtccctcagc ctccactcag gtcaggacca 1500 gaagtcgctg ttccctcttc agggactaga attttccacg gaataggaga ttatcccagg 1560 tgcctgtgtc caggctggtg tctgggttct gtgctccctt ccccatccca ggtgtcctgt 1620 ccattctcaa gatagccaca tgtgtgctgg aggagtgtcc cattacagat gcaaaatgcc 1680 tgaatgttct gactcttcct gacagacccc cccaagacgc atatgactca ccacgctgtc 1740 tctgaccatg aggccaccct gaggtgctgg gccctgagct tctaccctgc ggagatcaca 1800 ctgacctggc agcgggatgg ggaggaccag acccaggaca cggagctcgt ggagaccagg 1860 cctgcagggg atggaacctt ccagaagtgg gcgtctgtgg tggtgccttc tggacaggag 1920 cagagataca cctgccatgt gcagcatgag ggtctcccca agcccctcac cctgagatgg 1980 ggtaaggagg gagatggggg tgtcatgtct tttagggaaa gcaggagcct ctctgacctt 2040 tagcagggtc agggcccctc accttcccct cttttcccag agccgtcttc ccagcccacc 2100 atccccatcg tgggcatcat tgctggccta gttctctttg gagctgtgtt cgctggagct 2160 gtggtcgctg ctgtgaggtg gaggaggaag agctcaggtg gggtgaaggg gtgaagggtg 2220 ggtctgagat ttcttgtctc actgagggtt ccaagaccca ggtagaagtg tgccctgcct 2280 cgttactggg aagcaccatc cacaattatg ggcctaccca gcctgggccc tgtgtgccag 2340 cacttactct tttgtaaagc acctgttaaa atgaaggaca gatttatcac cttgattatg 2400 gcggtgatgg gacctgatcc cagcagtcac aagtcacagg ggaaggtccc tgaggacctt 2460 caggagggcg gttggtccag gacccacacc tgctttcttc atgtttcctg atcccgccct 2520 gggtctgcag tcacacattt ctggaaactt ctctgaggtc caagacttgg aggttcctct 2580 aggaccttaa ggccctggct cctttctggt atctcacagg acattttctt cccacagata 2640 gaaaaggagg gagctactct caggctgcaa gtaagtatga aggaggatga tccaagaaat 2700 cactgggata ttgtgtttgg gagcccgtgg gggagctcac ccaccccaca attcctcctc 2760 tagccacatc ttctgtggga tctgaccagg ttctgttttt gtcctacccc aggcagtgac 2820 agtgcccagg gctctgatat gtctctcaca gcttgtaaag gtgagagcct ggagggcctg 2880 atgtgtgttg ggtgttgggc ggaacagtgg acgcagctgt gctatggggt ttctttgcat 2940 tggatgtatt gagcatgcga tgggctgttt aaagtgtgac tcctcactgt gacagatacg 3000 aatttgttca tgaatatttt tttctatagt gtgagacagc tgccttgtgt gggactgaga 3060 ggcaagattt gttcctgccc ttccctttgt gacttgaagt accctgactt tgtttctgca 3120 aaggcacctg catgtgtctg tgttcttgta ggcataatgt gaggaggtgg ggagaccacc 3180 ccacccccat gtccaccatg accctcttcc cacgctgacc tgtgctccct ccccaatcat 3240 ctttcctgtt ccagagaggt ggggctgagg tgtctccatc tctgcctcaa cttcatggtg 3300 cactgagctg taacttcttc cttccctatt aaaa 3334 //