Dbfetch
ID MN203112; SV 1; linear; genomic DNA; STD; HUM; 3450 BP. XX AC MN203112; XX DT 20-FEB-2020 (Rel. 143, Created) DT 20-FEB-2020 (Rel. 143, Last updated, Version 1) XX DE Homo sapiens MHC class I antigen (HLA-A) gene, HLA-A*24var allele, complete DE cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3450 RA Truong L.; RT ; RL Submitted (18-JUL-2019) to the INSDC. RL Clinical Immunology, Fiona Stanley Hospital, Level 1 Pathology Building (or RL Building A) 9 Robin Warren Drive, Murdoch, Western Australia 6150, RL Australia XX DR MD5; 13497d7557c1fe301598a57bca323af4. XX CC ##Assembly-Data-START## CC Assembly Method :: GenDX NGSengine v. 2.13 CC Sequencing Technology :: IonTorrent CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3450 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <270..>3171 FT /gene="HLA-A" FT /allele="HLA-A*24var" FT mRNA join(<270..342,473..742,984..1259,1839..2114,2217..2333, FT 2776..2808,2951..2998,3167..>3171) FT /gene="HLA-A" FT /allele="HLA-A*24var" FT /product="MHC class I antigen" FT CDS join(270..342,473..742,984..1259,1839..2114,2217..2333, FT 2776..2808,2951..2998,3167..3171) FT /codon_start=1 FT /gene="HLA-A" FT /allele="HLA-A*24var" FT /product="MHC class I antigen" FT /protein_id="QIB00625.1" FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFSTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDEETGKVKAHSQTDRENLRI FT ALRYYNQSEAGSHTLQMMFGCDVGSDGRFLRGYHQYAYDGKDYIALKEDLRSWTAADMA FT AQITKRKWEAAHVAEQQRAYLEGTCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPSGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTVPIVGIIAGLVLLGAVITGAVVAAVMWRRNSSDRK FT GGSYSQAASSDSAQGSDVSLTACKV" XX SQ Sequence 3450 BP; 659 A; 1002 C; 1047 G; 742 T; 0 other; ggccccaggc gtggctctca gggtctcagg ccccgaaggc ggtgtatgga ttggggagtc 60 ccagccttgg ggattcccca actccgcagt ttcttttctc cctctcccaa cctatgtagg 120 gtccttcttc ctggatactc acgacgcgga cccagttctc actcccattg ggtgtcgggt 180 ttccagagaa gccaatcagt gtcgtcgcgg tcgctgttct aaagtccgca cgcacccacc 240 gggactcaga ttctccccag acgccgagga tggccgtcat ggcgccccga accctcgtcc 300 tgctactctc gggggccctg gccctgaccc agacctgggc aggtgagtgc ggggtcggga 360 gggaaacggc ctctgcgggg agaagcaagg ggcccgcctg gcgggggcgc aagacccggg 420 aagccgcgcc gggaggaggg tcgggcgggt ctcagccact cctcgtcccc aggctcccac 480 tccatgaggt atttctccac atccgtgtcc cggcccggcc gcggggagcc ccgcttcatc 540 gccgtgggct acgtggacga cacgcagttc gtgcggttcg acagcgacgc cgcgagccag 600 aggatggagc cgcgggcgcc gtggatagag caggaggggc cggagtattg ggacgaggag 660 acagggaaag tgaaggccca ctcacagact gaccgagaga acctgcggat cgcgctccgc 720 tactacaacc agagcgaggc cggtgagtga ccccggcccg gggcgcaggt cacgacccct 780 catcccccac ggacgggccg ggtcgcccac agtctccggg tccgagatcc accccgaagc 840 cgcgggaccc cgagaccctt gccccgggag aggcccaggc gccttaaccc ggtttcattt 900 tcagtttagg ccaaaaatcc ccccgggttg gtcggggccg ggcggggctc gggggactgg 960 gctgaccgcg gggtcggggc caggttctca caccctccag atgatgtttg gctgcgacgt 1020 ggggtcggac gggcgcttcc tccgcgggta ccaccagtac gcctacgacg gcaaggatta 1080 catcgccctg aaagaggacc tgcgctcttg gaccgcggcg gacatggcgg ctcagatcac 1140 caagcgcaag tgggaggcgg cccatgtggc ggagcagcag agagcctacc tggagggcac 1200 gtgcgtggac gggctccgca gatacctgga gaacgggaag gagacgctgc agcgcacggg 1260 taccaggggc cacggggcgc ctacctgatc gcctgtaggt ctcccgggct ggcctcccac 1320 aaggagggga gacaattggg accaacacta gaatatcgcc ctccctctgg tcctgaggga 1380 gaggaatcct cctgggtttc cagatcctgt accagagagt gactctgagg ttccgccctg 1440 ctctctgaca caattaaggg ataaaatctc tgacggaatg acggaaagac gatccctcga 1500 atactgatga ctggttccct ttgacaccgg cagcagcctt gggaccgtga cttttcctct 1560 caggccttgt tctctgcttc acactcaatg tgtgtggggg tctgagtcca gcacttctga 1620 gtccctcagc ctccactcag gtcaggacca gaagtcgctg ttccctcctc agggaataga 1680 agattatccc aggtgcctgt gtccaggctg gtgtctgggt tctgtgctct cttccccatc 1740 ccgggtgtcc tgtccattct caagatggcc acatgcatgc tggtggagtg tcccatgaca 1800 gatgcaaaat gcctgaattt tctgactctt cccgtcagac ccccccaaga cacatatgac 1860 ccaccacccc atctctgacc atgaggccac tctgagatgc tgggccctgg gcttctaccc 1920 tgcggagatc acactgacct ggcagcggga tggggaggac cagacccagg acacggagct 1980 tgtggagacc aggccttcag gggatggaac cttccagaag tgggcagctg tggtggtacc 2040 ttctggagag gagcagagat acacctgcca tgtgcagcat gagggtctgc ccaagcccct 2100 caccctgaga tggggtaagg agggagatgg gggtgtcatg tctcttaggg aaagcaggag 2160 cctctctgga gacctttagc agggtcaggg cccctcacct tcccctcttt tcccagagcc 2220 atcttcccag cccaccgtcc ccatcgtggg catcattgct ggcctggttc tccttggagc 2280 tgtgatcact ggagctgtgg tcgctgctgt gatgtggagg aggaacagct caggtggaga 2340 aggggtgaag ggtggggtct gagatttctt gtctcactga gggttccaag ccccagctag 2400 aaatgtgccc tgtctcatta ctgggaagca ccatccacaa tcatgggccg acccagcctg 2460 ggccctgtgt gccagcactt actcttttgt aaagcacctg tgacaatgaa ggacagattt 2520 atcaccttga ttatggcggt gatgggacct gatcccagca gtcacaagtc acaggggaag 2580 gtccctgacg acagatctca ggagggcgat tggtccaggg cccacatctg ctttcttcat 2640 gtttcctgat cctgccctgg gtctgcagtc acacatttct ggaaacttct ctggggtcca 2700 agactaggag gttcctctag gaccttaagg ccctggctcc tttctggtat ctcacaggac 2760 attttcttcc cacagataga aaaggaggga gctactctca ggctgcaagt aagtatgaag 2820 gaggctgatg cctgaggtcc ttgggatatt gtgtttggga gcccatgggg gagctcaacc 2880 accccacaat tcctcctcta gccacatctt ctgtgggatc tgaccaggtt ctgtttttgt 2940 tctaccccag gcagtgacag tgcccagggc tctgatgtgt ctctcacagc ttgtaaaggt 3000 gagagcttgg agggcctgat gtgtgttggg tgttgggcgg aacagtggac acagctgtgc 3060 tatggggttt ctttgcattg gatgtattga gcatgcgatg ggctgtttaa agtgtgaccc 3120 ctcactgtga cagatatgaa gttgttcatg aatttttttt ctatagtgtg agacagctgc 3180 cttgtgtggg actgagaggc aagagttgtt cctgcccttc cctttgtgac ttgaagaacc 3240 ctgactttgt ttctgcaaag gcacctgcat gtgtctgtgt tcatgtaggc ataatgtgag 3300 gaggtgggga gaccacccca cccccatgtc caccatgacc ctcttcccac gctgacctgt 3360 gctccctccc caatcatctt tcctgttgca gagaggtggg gctgaggtgt ctccatctct 3420 gtctcaactt catggtgcac tgagctgtaa 3450 //