Dbfetch
ID MN154559; SV 1; linear; genomic DNA; STD; HUM; 3586 BP. XX AC MN154559; XX DT 20-FEB-2020 (Rel. 143, Created) DT 20-FEB-2020 (Rel. 143, Last updated, Version 1) XX DE Homo sapiens isolate 2018-271-01121 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*09:02:02var allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3586 RA York S.L., Ivery K.J., Williams J.D.; RT ; RL Submitted (08-JUL-2019) to the INSDC. RL DNA Identity, LabCorp, 1440 York Ct, Burlington, NC 277215, USA XX DR MD5; 9c2edb859bd4520adc1d936ff4b66140. XX CC ##Assembly-Data-START## CC Assembly Method :: LAA2 v. 10/2018 CC Coverage :: >100 X CC Sequencing Technology :: PacBio CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3586 FT /organism="Homo sapiens" FT /isolate="2018-271-01121" FT /mol_type="genomic DNA" FT /country="Argentina" FT /db_xref="taxon:9606" FT gene <9..>3586 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*09:02:02var" FT mRNA join(<9..278,2515..2796,3494..>3586) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*09:02:02var" FT /product="MHC class II antigen" FT CDS join(<9..278,2515..2796,3494..>3586) FT /codon_start=3 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*09:02:02var" FT /product="MHC class II antigen" FT /protein_id="QIA58975.1" FT /translation="RFLKQDKFECHFFNGTERVRYLHRGIYNQEENVRFDSDVGEYRAV FT TELGRPDAEYWNSQKDLLERRRAEVDTVCRHNYGVGESFTVQRRVHPEVTVYPAKTQPL FT QHHNLLVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSVMSPLTVEWRARSESAQSKMLSGVGGFVLGLLFLGAGLFI" XX SQ Sequence 3586 BP; 909 A; 707 C; 864 G; 1106 T; 0 other; ccccacagca cgtttcttga agcaggataa gtttgagtgt catttcttca acgggacgga 60 gcgggtgcgg tatctgcaca gaggcatcta taaccaagag gagaacgtgc gcttcgacag 120 cgacgtgggg gagtaccggg cggtgacgga gctggggcgg cctgatgccg agtactggaa 180 cagccagaag gacctcctgg agcggaggcg ggccgaggtg gacaccgtgt gcagacacaa 240 ctacggggtt ggtgagagct tcacagtgca gaggcgaggt aagcatggtg gggggcgggg 300 cctgggtccc tgtgaactgg gaatctgagt gtgtgtgtgt gtgtgtgtga gagagagaga 360 gagagaggaa gagagagaca gaaagaggga gcgcgccatc tgtgagcatt tagaatcctc 420 tcaatcttga gtaaggagtt ctgaggacac aggtgtgtgt gtagagtgtg gatttgtctg 480 tgtggctgtt gtgggagggg aggcaggagg ggggctgctt cttatccttg gaggcctctg 540 tggggaggtg acgtgggagg ggggtacagg gggctggaga cagattggac cttgattgtc 600 ctgggtcctt ggagatgcag ggaagggaag tgtagggtgt gtgtggttgg ggtgaaggtt 660 taggagagga gaactgaggg gtatagaagg tttgggataa tgtgaggagg ccagttccag 720 acggtccctg gcacacaccc ttcatgcaat ctctgaaata aaagtgtgtg ctgtttgttt 780 gcaaaagcat taaattaatt tctaggggaa ctgaggagac ctctgaggca cctctaaagc 840 ttctttattt taggtctaaa tttcttgcta tttttttgtt ttcttagtgt gtatattttt 900 acatacttga aatgactgtg aaactaactt tttgaattaa agtttgaaca cagttactat 960 ttcattataa tgctaataat tccatagtta catattattc ttttatattt aatagttgtg 1020 acacaaatta cctcactttc ccctttgatg acctttatta tgacattgac caaaagttga 1080 aaatgtatgt ttctggttaa tttttgattt atattttttt ggtttgtaat tcttttgaat 1140 tatattgacc tatttattgg ccagttataa ttactgctct accaattacc tgttgtgtaa 1200 tggacagtga tctattgtct gttatctcta gggcttagta tttttctcag tgactttgtg 1260 ggttctttgt actgtaagat tattaacact ttattgatat ttgattcagt attttctcca 1320 gtttgtggta tgtatatttt gaaaattctt ttccatgtta agaatttgaa catttttatt 1380 tagtaaaata tattgcaaaa tattaattaa tgatttacaa actagctcaa gtctaccatt 1440 ttgtggtatt gttgtctcca agtttctcct tccttcttaa aaaaaaatgt atttattgag 1500 agcatgctag tgtgttaggg atttccctag gcataatcac cccaagtaat gagtcccaga 1560 ccctgccttg atccaaattt cattctggaa agaaaaatca ttttacaatg ataggcctaa 1620 taatagttat acttgttttg cctgggagat gcattgatca gctaaatgta aatataagaa 1680 ctttcaaaac taaaatgacg ttccttaatc attctctctg ctttaggact catgcttttt 1740 taggaactta aagatttgga gaatcatttc tgtctgtccc accttcccag gagcataacc 1800 atttctgtgg tgttctaagg tgtgagtgca tggcagtagt attcctaaaa attcatactc 1860 agtttcctca tgtgccctac tccgtccctt tctctattca cattgcttta aatcatattt 1920 ttccctcaag gtgtacaagg atgataaata ggtgccaagt ggtgcacaca agtgtgatga 1980 gccctctcac agtggaatgg agtgagaagc tttctaacct cataaattga aggctatctt 2040 cagtcttttt tttatgtatt ttactcgcat taatcctcat ataacctcaa gaggtaaatt 2100 aatataatta tcctccatta ttggtgagaa agttgagaca caaaagaatc aaaaactctt 2160 ccaggatcaa ccagtaaaag gcagaccttg gatttgaacc aggcaacctg gctcagaagt 2220 cagttttaat taccacactc tgtacgttca aagatttgta aacactttga caatgcatgt 2280 caatttcaag ctatgaagag ccaaacataa tttttcacag tatctctcaa atctaatggg 2340 tccccactat aaagattaaa ttccaggctg atgagactgt gaggccacat ggccagctgt 2400 gttggaggtc tgctcaaggc cagagcctag gtttacagag aagcagacaa aaagctaaac 2460 aaggagactt actctgtctt cctgactcat tccctctacc ttgttttctc ctagtccatc 2520 ctgaggtgac tgtgtatcct gccaagactc agcccctgca gcaccacaac ctcctggtct 2580 gctctgtgag tggtttctat ccaggcagca ttgaagtcag gtggttccgg aacggccagg 2640 aagagaaggc tggggtggtg tccacaggcc tgatccagaa tggagactgg accttccaga 2700 ccctggtgat gctggaaaca gttcctcgga gtggagaagt ttacacctgc caagtggagc 2760 acccaagtgt gatgagccct ctcacagtgg aatggagtga gcagctttct gacttcataa 2820 atttctcacc caccaagaag gggactgtgc taatcccttg agtgtcgggt ttctcctctc 2880 ccacatccta ttttcatttg ctccatgttc tcatctccat cagcacaggt cactgagggt 2940 agccctgtaa tactttctag aaacacctgt accccctggg gaagcaatca tgcctgccag 3000 gcaggagagg ctgtccctct tttgaacctc cccatgatgt cacaggtcag gatcacctgc 3060 tgtccgtggg ctccaggccc tgcctctggg tctgagactg agtttctggt gctgttgctc 3120 tgagttgttt gttgtaatct gagaagagga gaagtatagg ggccttcctg acatgaggag 3180 agtccaatct cagctctgcc ttttattagg tctgtcactc taggcaacta cttaacctca 3240 ttgggtctca ggctttctgt ggatcagatg ttgaagtcct gccttacatc aaggctgtaa 3300 tatttgaatg agtttgatgc ctgaatcttg taactgttca gtgtgatttg aaaacctttt 3360 tttctcaaga aatagttatt ttagttcttg cagggcagcc ttctttctca ttttcaaagc 3420 tctgaatctc agggtgtcaa ttaaagaggt tccatttaag ataaaaatca ctaaacctgg 3480 cttcctctct caggagcacg gtctgaatct gcacagagca agatgctgag tggagtcggg 3540 ggctttgtgc tgggcctgct cttccttggg gccgggctgt tcatct 3586 //