Dbfetch
ID MN154548; SV 1; linear; genomic DNA; STD; HUM; 3120 BP. XX AC MN154548; XX DT 20-FEB-2020 (Rel. 143, Created) DT 20-FEB-2020 (Rel. 143, Last updated, Version 1) XX DE Homo sapiens isolate 2018-271-01106 MHC class I antigen (HLA-C) gene, DE HLA-C*08:02:01:02var allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3120 RA York S.L., Ivery K.J., Williams J.D.; RT ; RL Submitted (08-JUL-2019) to the INSDC. RL DNA Identity, LabCorp, 1440 York Ct, Burlington, NC 277215, USA XX DR MD5; a4012f5e3b17db3f1347958de01dab7b. XX CC ##Assembly-Data-START## CC Assembly Method :: LAA2 v. 10/2018 CC Coverage :: >100 X CC Sequencing Technology :: PacBio CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3120 FT /organism="Homo sapiens" FT /isolate="2018-271-01106" FT /mol_type="genomic DNA" FT /country="Argentina" FT /db_xref="taxon:9606" FT gene <212..>3106 FT /gene="HLA-C" FT /allele="HLA-C*08:02:01:02var" FT mRNA join(<212..284,415..684,931..1206,1794..2069,2191..2310, FT 2750..2782,2890..2937,3102..>3106) FT /gene="HLA-C" FT /allele="HLA-C*08:02:01:02var" FT /product="MHC class I antigen" FT CDS join(212..284,415..684,931..1206,1794..2069,2191..2310, FT 2750..2782,2890..2937,3102..3106) FT /codon_start=1 FT /gene="HLA-C" FT /allele="HLA-C*08:02:01:02var" FT /product="MHC class I antigen" FT /protein_id="QIA58965.1" FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMRYFYTAVSRPGRGEPR FT FIAVGYVDDTQFVQFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN FT LRGYYNQSEAESHTLQRMYGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADKA FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKKTLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWGPSSQPTIPIVGIVAGLAVLAVLAVLGAVMAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" XX SQ Sequence 3120 BP; 586 A; 915 C; 975 G; 644 T; 0 other; ggaggcgccg cgttgaggat tctccactcc cctgagtttc acttcttctt ccaacctgcg 60 tcgggtcctt cttcctgaat actcatgacg cgtccccaat tcccactccc attgggtgtc 120 gggttctaga gaagccaatc agcgtctccg cagtcccggt tctaaagtcc ccagtcaccc 180 acccggactc ggattctccc cagacgccga gatgcgggtc atggcgcccc gaaccctcat 240 cctgctgctc tcgggagccc tggccctgac cgagacctgg gcctgtgagt gcgaggttgg 300 gagggaaacg gcctctgcgg agaggagcga ggggcccgcc cggcgagggc gcaggacccg 360 gggagccgcg cagggaggag ggtcgggcgg gtctcagccc ctcctcgccc ccaggctccc 420 actccatgag gtatttctac accgccgtgt cccggcccgg ccgcggagag ccccgcttca 480 tcgcagtggg ctacgtggac gacacgcagt tcgtgcagtt cgacagcgac gccgcgagtc 540 caagagggga gccgcgggcg ccgtgggtgg agcaggaggg gccggagtat tgggaccggg 600 agacacagaa gtacaagcgc caggcacaga ctgaccgagt gagcctgcgg aacctgcgcg 660 gctactacaa ccagagcgag gccggtgagt gaccccggcc cggggcgcag gtcacgaccc 720 ctccccatcc cccacggacg gcccgggtcg ccccgagtct cccggtctga gatccacccc 780 gaggctgcgg aacccgccca gaccctcgac cggagagagc cccagtcacc tttacccggt 840 ttcattttca gtttaggcca aaatccccgc gggttggtcg gggctggggc ggggctcggg 900 ggacggggct gaccacgggg gcggggccag agtctcacac cctccagagg atgtatggct 960 gcgacctggg gcccgacggg cgcctcctcc gcgggtataa ccagttcgcc tacgacggca 1020 aggattacat cgccctgaat gaggacctgc gctcctggac cgccgcggac aaggcggctc 1080 agatcaccca gcgcaagtgg gaggcggccc gtgaggcgga gcagcggaga gcctacctgg 1140 agggcacgtg cgtggagtgg ctccgcagat acctggagaa cgggaagaag acgctgcagc 1200 gcgcgggtac caggggcagt ggggagcctt ccccatctcc tgtagatctc ccgggatggc 1260 ctcccacgag gaggggagga aaatgggatc agcgctggaa tatcgccctc ccttgaatgg 1320 agaatgggat gagttttcct gagtttcttc tgagggcccc ctctgctctc taggacaatt 1380 aagggatgaa gtccttgagg aaatggaggg gaagacagtc cctggaatac tgatcagggg 1440 tcccctttga ccactttgac cactgcagca gctgtggtca ggctgctgac ctttctctca 1500 ggccttgttc tctgcctcac gctcaatgtg tttaaaggtt tgattccagc ttttctgagt 1560 ccttcggcct ccactcaggt caggaccaga agtcgctgtt cctccctcag agactagaac 1620 tttccaatga ataggagatt atcccaggtg cctgtgtcca ggctggcgtc tgggttctgt 1680 gcccccttcc ccaccccagg tgtcctgtcc attctcagga tggtcacatg ggcactgttg 1740 gagtgtcgca agagagatac aaagtgtctg aattttctga ctcttcccgt cagaacaccc 1800 aaagacacac gtgacccacc atcccgtctc tgaccatgag gccaccctga ggtgctgggc 1860 cctgggcttc taccctgcgg agatcacact gacctggcag cgggatggcg aggaccaaac 1920 tcaggacacc gagcttgtgg agaccaggcc agcaggagat ggaaccttcc agaagtgggc 1980 agctgtggtg gtgccttctg gagaagagca gagatacacg tgccatgtgc agcacgaggg 2040 gctgccagag cccctcaccc tgagatgggg taaggagggg gatgaggggt catgtgtctt 2100 ctcagggaaa gcagaagtcc tggagccctt cagccgggtc agggctgagg cttgggggtc 2160 agggcccctc accttcccct cctttcccag ggccatcttc ccagcccacc atccccatcg 2220 tgggcatcgt tgctggcctg gctgtcctgg ctgtcctagc tgtcctagga gctgtgatgg 2280 ctgttgtgat gtgtaggagg aagagctcag gtagggaagg ggtgaggagt ggggtctggg 2340 ttttcttgtc ccactgggag tttcaagccc caggtagaag tgtgccccac ctcgttactg 2400 gaagcaccat ccacacatgg gccatcccag cctgggaccc tgtgtgctag cacttactct 2460 gttgtgaagc acatgacaat gaaggacaga tgtatcacct tgatgattat ggtgttgggg 2520 tccttgattc cagcattcat gagtcagggg aaggtccctg ctaaggacag accttaggag 2580 ggcagttgct ccagaaccca cagctgcttt ccccgtgttt cctgatcctg ccctgggtct 2640 gcagtcatag ttctggaaac ttctcttggg tccaagacta ggaggttccc ctaagatcgc 2700 atggccctgc ctcctccctg tcccctcaca gggcattttc ttcccacagg tggaaaagga 2760 gggagctgct ctcaggctgc gtgtaagtga tggcggtggg cgtgtggagg agctcaccca 2820 ccccataatt cctcttgtcc cacatctcct gcgggctctg accaggtctt tttttttgtt 2880 ctaccccagc cagcaacagt gcccagggct ctgatgagtc tctcatcgct tgtaaaggtg 2940 agattctggg gagctgaagt ggtcgggggt ggggcagagg gaaaaggcct aggtaatggg 3000 gatcctttga ttgggacgtt tcgaatgtgt ggtgagctgt tcagagtgtc atcacttacc 3060 atgactgacc tgaatttgtt catgactatt gtgttctgta gcctgagaca gctgcctgtg 3120 //